EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000014593 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 186600 bases
Position: chrFYBX02010718.1:2960930-3147529
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000023727	CPSF_A	PF03178.15	6.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024302	-	2715	-	ENSEBUP00000023727	904 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014593	ddb1	97	84.927	ENSG00000167986	DDB1	100	90.411	Homo_sapiens
ENSEBUG00000014593	ddb1	97	84.477	ENSAPOG00000005036	ddb1	91	84.477	Acanthochromis_polyacanthus
ENSEBUG00000014593	ddb1	97	85.039	ENSAMEG00000016518	DDB1	78	85.039	Ailuropoda_melanoleuca
ENSEBUG00000014593	ddb1	97	83.915	ENSACIG00000020624	ddb1	91	83.915	Amphilophus_citrinellus
ENSEBUG00000014593	ddb1	97	84.252	ENSAOCG00000003066	ddb1	78	84.252	Amphiprion_ocellaris
ENSEBUG00000014593	ddb1	97	84.364	ENSAPEG00000000092	ddb1	82	84.364	Amphiprion_percula
ENSEBUG00000014593	ddb1	97	84.252	ENSATEG00000020571	ddb1	91	80.225	Anabas_testudineus
ENSEBUG00000014593	ddb1	96	83.676	ENSAPLG00000007174	DDB1	77	83.676	Anas_platyrhynchos
ENSEBUG00000014593	ddb1	97	84.927	ENSACAG00000017758	DDB1	78	84.927	Anolis_carolinensis
ENSEBUG00000014593	ddb1	97	84.927	ENSANAG00000021878	DDB1	78	84.927	Aotus_nancymaae
ENSEBUG00000014593	ddb1	97	83.766	ENSACLG00000012401	ddb1	99	83.766	Astatotilapia_calliptera
ENSEBUG00000014593	ddb1	97	84.927	ENSBTAG00000021569	DDB1	73	84.927	Bos_taurus
ENSEBUG00000014593	ddb1	97	37.624	WBGene00010890	ddb-1	78	37.624	Caenorhabditis_elegans
ENSEBUG00000014593	ddb1	97	84.927	ENSCJAG00000019319	DDB1	78	84.927	Callithrix_jacchus
ENSEBUG00000014593	ddb1	97	85.039	ENSCAFG00000016264	DDB1	82	85.039	Canis_familiaris
ENSEBUG00000014593	ddb1	97	85.039	ENSCAFG00020012722	DDB1	82	85.039	Canis_lupus_dingo
ENSEBUG00000014593	ddb1	97	84.927	ENSCHIG00000014969	DDB1	78	84.927	Capra_hircus
ENSEBUG00000014593	ddb1	97	84.589	ENSTSYG00000008027	DDB1	78	84.589	Carlito_syrichta
ENSEBUG00000014593	ddb1	95	84.677	ENSCAPG00000010786	DDB1	78	84.677	Cavia_aperea
ENSEBUG00000014593	ddb1	97	84.702	ENSCPOG00000009956	DDB1	78	84.702	Cavia_porcellus
ENSEBUG00000014593	ddb1	97	84.927	ENSCCAG00000035883	DDB1	78	84.927	Cebus_capucinus
ENSEBUG00000014593	ddb1	97	82.464	ENSCATG00000044495	DDB1	78	82.464	Cercocebus_atys
ENSEBUG00000014593	ddb1	97	84.702	ENSCLAG00000004126	DDB1	78	84.702	Chinchilla_lanigera
ENSEBUG00000014593	ddb1	97	84.927	ENSCSAG00000006392	DDB1	78	84.927	Chlorocebus_sabaeus
ENSEBUG00000014593	ddb1	85	82.895	ENSCHOG00000011377	DDB1	69	82.895	Choloepus_hoffmanni
ENSEBUG00000014593	ddb1	97	84.364	ENSCPBG00000017728	DDB1	78	84.364	Chrysemys_picta_bellii
ENSEBUG00000014593	ddb1	97	60.333	ENSCING00000007437	-	78	60.222	Ciona_intestinalis
ENSEBUG00000014593	ddb1	90	58.223	ENSCSAVG00000004783	-	99	57.933	Ciona_savignyi
ENSEBUG00000014593	ddb1	97	84.927	ENSCANG00000019948	DDB1	78	84.927	Colobus_angolensis_palliatus
ENSEBUG00000014593	ddb1	97	84.927	ENSCGRG00001016599	Ddb1	82	83.796	Cricetulus_griseus_chok1gshd
ENSEBUG00000014593	ddb1	97	84.927	ENSCGRG00000013427	Ddb1	78	84.927	Cricetulus_griseus_crigri
ENSEBUG00000014593	ddb1	97	83.915	ENSCSEG00000012499	ddb1	91	82.386	Cynoglossus_semilaevis
ENSEBUG00000014593	ddb1	97	84.027	ENSCVAG00000019531	ddb1	82	84.027	Cyprinodon_variegatus
ENSEBUG00000014593	ddb1	97	80.562	ENSDARG00000074431	ddb1	78	80.562	Danio_rerio
ENSEBUG00000014593	ddb1	97	85.152	ENSDNOG00000014884	DDB1	81	85.152	Dasypus_novemcinctus
ENSEBUG00000014593	ddb1	78	90.000	ENSDORG00000000127	Ddb1	74	88.938	Dipodomys_ordii
ENSEBUG00000014593	ddb1	97	59.015	FBgn0260962	pic	78	58.903	Drosophila_melanogaster
ENSEBUG00000014593	ddb1	97	84.927	ENSEASG00005008184	DDB1	78	84.927	Equus_asinus_asinus
ENSEBUG00000014593	ddb1	97	84.927	ENSECAG00000012136	DDB1	78	84.927	Equus_caballus
ENSEBUG00000014593	ddb1	87	77.804	ENSEEUG00000003194	DDB1	70	77.804	Erinaceus_europaeus
ENSEBUG00000014593	ddb1	97	83.802	ENSELUG00000023868	ddb1	78	83.802	Esox_lucius
ENSEBUG00000014593	ddb1	97	85.039	ENSFCAG00000029716	DDB1	78	85.039	Felis_catus
ENSEBUG00000014593	ddb1	97	84.252	ENSFALG00000011981	DDB1	78	84.252	Ficedula_albicollis
ENSEBUG00000014593	ddb1	97	84.702	ENSFDAG00000005128	DDB1	78	84.702	Fukomys_damarensis
ENSEBUG00000014593	ddb1	86	83.355	ENSFHEG00000022133	ddb1	74	84.494	Fundulus_heteroclitus
ENSEBUG00000014593	ddb1	78	90.301	ENSGMOG00000019386	ddb1	75	90.301	Gadus_morhua
ENSEBUG00000014593	ddb1	97	84.702	ENSGALG00000042333	DDB1	78	84.702	Gallus_gallus
ENSEBUG00000014593	ddb1	97	84.364	ENSGAFG00000013142	ddb1	82	84.364	Gambusia_affinis
ENSEBUG00000014593	ddb1	97	84.027	ENSGACG00000017182	ddb1	81	84.027	Gasterosteus_aculeatus
ENSEBUG00000014593	ddb1	91	84.154	ENSGAGG00000014124	DDB1	77	84.154	Gopherus_agassizii
ENSEBUG00000014593	ddb1	97	84.927	ENSGGOG00000004052	DDB1	78	84.927	Gorilla_gorilla
ENSEBUG00000014593	ddb1	97	83.690	ENSHBUG00000008873	ddb1	78	83.690	Haplochromis_burtoni
ENSEBUG00000014593	ddb1	97	84.702	ENSHGLG00000018430	DDB1	78	84.702	Heterocephalus_glaber_female
ENSEBUG00000014593	ddb1	97	84.318	ENSHGLG00100014475	DDB1	78	84.318	Heterocephalus_glaber_male
ENSEBUG00000014593	ddb1	97	84.027	ENSHCOG00000018670	ddb1	81	84.027	Hippocampus_comes
ENSEBUG00000014593	ddb1	97	84.027	ENSIPUG00000005612	DDB1	81	84.027	Ictalurus_punctatus
ENSEBUG00000014593	ddb1	97	84.927	ENSSTOG00000007552	DDB1	78	84.927	Ictidomys_tridecemlineatus
ENSEBUG00000014593	ddb1	97	85.039	ENSJJAG00000017769	Ddb1	78	85.039	Jaculus_jaculus
ENSEBUG00000014593	ddb1	97	84.589	ENSKMAG00000002315	ddb1	83	84.589	Kryptolebias_marmoratus
ENSEBUG00000014593	ddb1	95	84.138	ENSLBEG00000017065	ddb1	90	84.138	Labrus_bergylta
ENSEBUG00000014593	ddb1	97	84.364	ENSLACG00000017611	DDB1	80	84.465	Latimeria_chalumnae
ENSEBUG00000014593	ddb1	86	84.071	ENSLOCG00000000012	ddb1	75	84.071	Lepisosteus_oculatus
ENSEBUG00000014593	ddb1	97	84.814	ENSLAFG00000011513	DDB1	78	84.814	Loxodonta_africana
ENSEBUG00000014593	ddb1	97	84.927	ENSMFAG00000042035	DDB1	78	84.927	Macaca_fascicularis
ENSEBUG00000014593	ddb1	97	84.927	ENSMMUG00000002691	DDB1	98	87.324	Macaca_mulatta
ENSEBUG00000014593	ddb1	97	84.927	ENSMNEG00000031559	DDB1	78	84.927	Macaca_nemestrina
ENSEBUG00000014593	ddb1	97	84.927	ENSMLEG00000044136	DDB1	81	83.130	Mandrillus_leucophaeus
ENSEBUG00000014593	ddb1	97	84.364	ENSMAMG00000014372	ddb1	78	84.364	Mastacembelus_armatus
ENSEBUG00000014593	ddb1	97	83.690	ENSMZEG00005013835	ddb1	78	83.690	Maylandia_zebra
ENSEBUG00000014593	ddb1	90	84.390	ENSMGAG00000004990	DDB1	76	84.390	Meleagris_gallopavo
ENSEBUG00000014593	ddb1	97	84.927	ENSMAUG00000012926	Ddb1	78	84.927	Mesocricetus_auratus
ENSEBUG00000014593	ddb1	97	84.927	ENSMICG00000013703	DDB1	78	84.927	Microcebus_murinus
ENSEBUG00000014593	ddb1	97	84.814	ENSMOCG00000020499	Ddb1	78	84.814	Microtus_ochrogaster
ENSEBUG00000014593	ddb1	97	84.364	ENSMMOG00000001758	ddb1	91	84.364	Mola_mola
ENSEBUG00000014593	ddb1	97	74.804	ENSMODG00000020353	DDB1	77	75.000	Monodelphis_domestica
ENSEBUG00000014593	ddb1	97	84.364	ENSMALG00000014071	ddb1	78	84.364	Monopterus_albus
ENSEBUG00000014593	ddb1	97	84.927	MGP_CAROLIEiJ_G0022695	Ddb1	78	84.927	Mus_caroli
ENSEBUG00000014593	ddb1	97	84.927	ENSMUSG00000024740	Ddb1	78	84.927	Mus_musculus
ENSEBUG00000014593	ddb1	97	84.927	MGP_PahariEiJ_G0014189	Ddb1	78	84.927	Mus_pahari
ENSEBUG00000014593	ddb1	97	84.927	MGP_SPRETEiJ_G0023609	Ddb1	78	84.927	Mus_spretus
ENSEBUG00000014593	ddb1	97	84.139	ENSMPUG00000014200	DDB1	80	84.139	Mustela_putorius_furo
ENSEBUG00000014593	ddb1	97	84.702	ENSMLUG00000013232	DDB1	78	84.702	Myotis_lucifugus
ENSEBUG00000014593	ddb1	97	84.589	ENSNGAG00000009384	Ddb1	78	84.589	Nannospalax_galili
ENSEBUG00000014593	ddb1	97	83.802	ENSNBRG00000019581	ddb1	78	83.802	Neolamprologus_brichardi
ENSEBUG00000014593	ddb1	97	81.798	ENSNLEG00000002022	DDB1	78	81.798	Nomascus_leucogenys
ENSEBUG00000014593	ddb1	86	93.939	ENSMEUG00000001099	DDB1	69	93.939	Notamacropus_eugenii
ENSEBUG00000014593	ddb1	82	85.230	ENSOPRG00000008254	DDB1	65	85.230	Ochotona_princeps
ENSEBUG00000014593	ddb1	97	84.814	ENSODEG00000002419	DDB1	78	84.814	Octodon_degus
ENSEBUG00000014593	ddb1	97	83.802	ENSONIG00000005804	ddb1	78	83.802	Oreochromis_niloticus
ENSEBUG00000014593	ddb1	85	83.867	ENSOANG00000004897	DDB1	76	83.867	Ornithorhynchus_anatinus
ENSEBUG00000014593	ddb1	97	85.039	ENSOCUG00000001667	DDB1	78	85.039	Oryctolagus_cuniculus
ENSEBUG00000014593	ddb1	97	83.802	ENSORLG00000001399	ddb1	84	83.802	Oryzias_latipes
ENSEBUG00000014593	ddb1	97	83.802	ENSORLG00020001277	ddb1	79	83.802	Oryzias_latipes_hni
ENSEBUG00000014593	ddb1	97	83.802	ENSORLG00015002080	ddb1	82	83.802	Oryzias_latipes_hsok
ENSEBUG00000014593	ddb1	97	84.027	ENSOMEG00000006181	ddb1	99	79.148	Oryzias_melastigma
ENSEBUG00000014593	ddb1	97	84.927	ENSOGAG00000016103	DDB1	78	84.927	Otolemur_garnettii
ENSEBUG00000014593	ddb1	97	84.927	ENSOARG00000011716	DDB1	77	84.927	Ovis_aries
ENSEBUG00000014593	ddb1	97	84.927	ENSPPAG00000035343	DDB1	78	84.927	Pan_paniscus
ENSEBUG00000014593	ddb1	97	85.039	ENSPPRG00000013300	DDB1	78	85.039	Panthera_pardus
ENSEBUG00000014593	ddb1	95	85.023	ENSPTIG00000006909	DDB1	76	85.023	Panthera_tigris_altaica
ENSEBUG00000014593	ddb1	97	84.927	ENSPTRG00000003737	DDB1	78	84.927	Pan_troglodytes
ENSEBUG00000014593	ddb1	97	84.927	ENSPANG00000000242	DDB1	78	84.927	Papio_anubis
ENSEBUG00000014593	ddb1	97	84.139	ENSPKIG00000019213	ddb1	78	84.139	Paramormyrops_kingsleyae
ENSEBUG00000014593	ddb1	95	83.849	ENSPSIG00000013275	DDB1	78	83.849	Pelodiscus_sinensis
ENSEBUG00000014593	ddb1	97	84.027	ENSPMGG00000021179	ddb1	91	84.027	Periophthalmus_magnuspinnatus
ENSEBUG00000014593	ddb1	97	84.927	ENSPEMG00000012241	Ddb1	78	84.927	Peromyscus_maniculatus_bairdii
ENSEBUG00000014593	ddb1	95	85.731	ENSPMAG00000008479	ddb1	85	85.731	Petromyzon_marinus
ENSEBUG00000014593	ddb1	97	84.589	ENSPCIG00000002643	DDB1	78	84.589	Phascolarctos_cinereus
ENSEBUG00000014593	ddb1	97	84.477	ENSPFOG00000002768	ddb1	78	84.477	Poecilia_formosa
ENSEBUG00000014593	ddb1	97	84.477	ENSPLAG00000017227	ddb1	81	84.477	Poecilia_latipinna
ENSEBUG00000014593	ddb1	97	84.477	ENSPMEG00000011398	ddb1	81	84.477	Poecilia_mexicana
ENSEBUG00000014593	ddb1	97	84.477	ENSPREG00000004440	ddb1	81	84.477	Poecilia_reticulata
ENSEBUG00000014593	ddb1	97	80.584	ENSPPYG00000003193	DDB1	78	80.584	Pongo_abelii
ENSEBUG00000014593	ddb1	78	80.668	ENSPCAG00000011040	DDB1	62	80.668	Procavia_capensis
ENSEBUG00000014593	ddb1	97	84.175	ENSPCOG00000015176	DDB1	78	84.175	Propithecus_coquereli
ENSEBUG00000014593	ddb1	97	84.814	ENSPVAG00000003847	DDB1	78	84.814	Pteropus_vampyrus
ENSEBUG00000014593	ddb1	97	84.927	ENSPNAG00000006635	ddb1	80	84.927	Pygocentrus_nattereri
ENSEBUG00000014593	ddb1	97	85.039	ENSRNOG00000020715	Ddb1	78	85.039	Rattus_norvegicus
ENSEBUG00000014593	ddb1	97	84.927	ENSRBIG00000033611	DDB1	79	84.927	Rhinopithecus_bieti
ENSEBUG00000014593	ddb1	97	84.927	ENSRROG00000041407	DDB1	78	84.927	Rhinopithecus_roxellana
ENSEBUG00000014593	ddb1	97	84.927	ENSSBOG00000019775	DDB1	78	84.927	Saimiri_boliviensis_boliviensis
ENSEBUG00000014593	ddb1	90	82.540	ENSSHAG00000011600	DDB1	76	82.540	Sarcophilus_harrisii
ENSEBUG00000014593	ddb1	97	84.139	ENSSFOG00015011151	ddb1	80	84.139	Scleropages_formosus
ENSEBUG00000014593	ddb1	97	84.477	ENSSMAG00000009495	ddb1	78	84.477	Scophthalmus_maximus
ENSEBUG00000014593	ddb1	97	84.252	ENSSDUG00000004642	ddb1	78	84.252	Seriola_dumerili
ENSEBUG00000014593	ddb1	97	84.252	ENSSLDG00000015804	ddb1	78	84.252	Seriola_lalandi_dorsalis
ENSEBUG00000014593	ddb1	65	83.019	ENSSARG00000003290	-	54	83.019	Sorex_araneus
ENSEBUG00000014593	ddb1	97	84.589	ENSSPUG00000019338	DDB1	78	84.589	Sphenodon_punctatus
ENSEBUG00000014593	ddb1	97	84.364	ENSSPAG00000009888	ddb1	90	81.573	Stegastes_partitus
ENSEBUG00000014593	ddb1	97	84.927	ENSSSCG00000013094	DDB1	79	84.927	Sus_scrofa
ENSEBUG00000014593	ddb1	97	84.814	ENSTGUG00000006414	DDB1	78	84.814	Taeniopygia_guttata
ENSEBUG00000014593	ddb1	97	83.802	ENSTRUG00000016682	ddb1	91	80.674	Takifugu_rubripes
ENSEBUG00000014593	ddb1	80	79.752	ENSTNIG00000009565	ddb1	72	79.752	Tetraodon_nigroviridis
ENSEBUG00000014593	ddb1	88	76.923	ENSTTRG00000011055	DDB1	72	76.923	Tursiops_truncatus
ENSEBUG00000014593	ddb1	97	85.039	ENSUAMG00000017793	DDB1	77	85.039	Ursus_americanus
ENSEBUG00000014593	ddb1	97	85.039	ENSUMAG00000011788	DDB1	81	85.039	Ursus_maritimus
ENSEBUG00000014593	ddb1	91	84.262	ENSVPAG00000007963	DDB1	74	84.019	Vicugna_pacos
ENSEBUG00000014593	ddb1	97	85.152	ENSVVUG00000004987	DDB1	78	85.152	Vulpes_vulpes
ENSEBUG00000014593	ddb1	97	83.371	ENSXETG00000008820	ddb1	78	83.371	Xenopus_tropicalis
ENSEBUG00000014593	ddb1	97	84.252	ENSXCOG00000013956	ddb1	91	84.252	Xiphophorus_couchianus
ENSEBUG00000014593	ddb1	97	84.252	ENSXMAG00000000022	ddb1	82	84.252	Xiphophorus_maculatus