EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000014773 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 228010 bases
Position: chrFYBX02009909.1:344446-572455
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024073	ResIII	PF04851.15	1e-10	1	1
ENSEBUP00000024009	ResIII	PF04851.15	1.2e-10	1	1
ENSEBUP00000024040	ResIII	PF04851.15	1.2e-10	1	1
ENSEBUP00000023977	ResIII	PF04851.15	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024585	SMARCA5-202	4631	-	ENSEBUP00000024009	1029 (aa)	-	-
ENSEBUT00000024650	SMARCA5-204	4418	-	ENSEBUP00000024073	958 (aa)	-	-
ENSEBUT00000024616	SMARCA5-203	4529	-	ENSEBUP00000024040	995 (aa)	-	-
ENSEBUT00000024553	SMARCA5-201	4304	-	ENSEBUP00000023977	1004 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000014773	SMARCA5	55	40.445	ENSEBUG00000005791	chd1l	70	40.445
ENSEBUG00000014773	SMARCA5	56	43.929	ENSEBUG00000014994	chd2	50	43.772
ENSEBUG00000014773	SMARCA5	95	81.742	ENSEBUG00000001239	smarca5	94	81.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014773	SMARCA5	96	85.744	ENSG00000153147	SMARCA5	92	85.744	Homo_sapiens
ENSEBUG00000014773	SMARCA5	96	85.744	ENSAMEG00000009585	SMARCA5	92	85.744	Ailuropoda_melanoleuca
ENSEBUG00000014773	SMARCA5	94	85.162	ENSAPLG00000009206	SMARCA5	98	85.162	Anas_platyrhynchos
ENSEBUG00000014773	SMARCA5	96	85.258	ENSACAG00000003038	SMARCA5	100	81.136	Anolis_carolinensis
ENSEBUG00000014773	SMARCA5	96	85.744	ENSANAG00000019345	SMARCA5	97	85.744	Aotus_nancymaae
ENSEBUG00000014773	SMARCA5	96	85.744	ENSBTAG00000003399	SMARCA5	92	85.744	Bos_taurus
ENSEBUG00000014773	SMARCA5	96	85.847	ENSCJAG00000002735	SMARCA5	98	81.485	Callithrix_jacchus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCAFG00000007525	SMARCA5	92	85.744	Canis_familiaris
ENSEBUG00000014773	SMARCA5	94	86.455	ENSCAFG00020025641	SMARCA5	91	86.455	Canis_lupus_dingo
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCHIG00000013730	-	98	81.704	Capra_hircus
ENSEBUG00000014773	SMARCA5	96	83.988	ENSCHIG00000016375	-	99	79.712	Capra_hircus
ENSEBUG00000014773	SMARCA5	96	85.847	ENSTSYG00000009954	SMARCA5	97	85.847	Carlito_syrichta
ENSEBUG00000014773	SMARCA5	97	84.939	ENSCAPG00000013747	SMARCA5	95	84.939	Cavia_aperea
ENSEBUG00000014773	SMARCA5	96	85.640	ENSCPOG00000002259	SMARCA5	92	85.640	Cavia_porcellus
ENSEBUG00000014773	SMARCA5	96	85.847	ENSCCAG00000027215	SMARCA5	97	85.847	Cebus_capucinus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCATG00000044917	SMARCA5	92	85.744	Cercocebus_atys
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCLAG00000006153	SMARCA5	97	85.744	Chinchilla_lanigera
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCSAG00000003448	SMARCA5	99	85.744	Chlorocebus_sabaeus
ENSEBUG00000014773	SMARCA5	87	85.080	ENSCHOG00000011724	SMARCA5	83	85.080	Choloepus_hoffmanni
ENSEBUG00000014773	SMARCA5	96	85.759	ENSCPBG00000027535	SMARCA5	93	85.759	Chrysemys_picta_bellii
ENSEBUG00000014773	SMARCA5	96	85.744	ENSCANG00000041629	SMARCA5	92	85.744	Colobus_angolensis_palliatus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSCGRG00001012719	Smarca5	92	85.640	Cricetulus_griseus_chok1gshd
ENSEBUG00000014773	SMARCA5	96	85.640	ENSCGRG00000001417	Smarca5	96	85.640	Cricetulus_griseus_crigri
ENSEBUG00000014773	SMARCA5	96	83.781	ENSDNOG00000009158	SMARCA5	92	83.781	Dasypus_novemcinctus
ENSEBUG00000014773	SMARCA5	88	89.639	ENSDORG00000003466	Smarca5	94	90.025	Dipodomys_ordii
ENSEBUG00000014773	SMARCA5	96	85.744	ENSEASG00005001866	SMARCA5	97	86.618	Equus_asinus_asinus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSECAG00000002676	SMARCA5	92	85.744	Equus_caballus
ENSEBUG00000014773	SMARCA5	96	82.541	ENSEEUG00000013176	SMARCA5	97	82.541	Erinaceus_europaeus
ENSEBUG00000014773	SMARCA5	96	81.269	ENSELUG00000014653	SMARCA5	99	81.269	Esox_lucius
ENSEBUG00000014773	SMARCA5	96	85.744	ENSFCAG00000004544	SMARCA5	92	85.744	Felis_catus
ENSEBUG00000014773	SMARCA5	96	85.449	ENSFALG00000004987	SMARCA5	99	85.449	Ficedula_albicollis
ENSEBUG00000014773	SMARCA5	96	85.744	ENSFDAG00000021016	SMARCA5	97	85.744	Fukomys_damarensis
ENSEBUG00000014773	SMARCA5	96	81.734	ENSGMOG00000007519	SMARCA5	94	81.734	Gadus_morhua
ENSEBUG00000014773	SMARCA5	96	85.552	ENSGALG00000009913	SMARCA5	93	85.552	Gallus_gallus
ENSEBUG00000014773	SMARCA5	96	83.488	ENSGACG00000017238	SMARCA5	94	83.488	Gasterosteus_aculeatus
ENSEBUG00000014773	SMARCA5	96	85.655	ENSGAGG00000019882	SMARCA5	93	85.655	Gopherus_agassizii
ENSEBUG00000014773	SMARCA5	96	85.744	ENSGGOG00000012595	SMARCA5	97	85.744	Gorilla_gorilla
ENSEBUG00000014773	SMARCA5	96	85.744	ENSHGLG00000000816	-	92	85.744	Heterocephalus_glaber_female
ENSEBUG00000014773	SMARCA5	96	77.479	ENSHGLG00000000317	-	92	77.479	Heterocephalus_glaber_female
ENSEBUG00000014773	SMARCA5	96	85.744	ENSHGLG00100018421	-	97	85.744	Heterocephalus_glaber_male
ENSEBUG00000014773	SMARCA5	96	85.640	ENSSTOG00000010683	SMARCA5	92	85.640	Ictidomys_tridecemlineatus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSJJAG00000014965	Smarca5	92	85.640	Jaculus_jaculus
ENSEBUG00000014773	SMARCA5	96	85.449	ENSLACG00000007091	SMARCA5	95	85.449	Latimeria_chalumnae
ENSEBUG00000014773	SMARCA5	96	85.139	ENSLOCG00000008966	SMARCA5	94	85.139	Lepisosteus_oculatus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSLAFG00000007795	SMARCA5	92	85.744	Loxodonta_africana
ENSEBUG00000014773	SMARCA5	96	85.744	ENSMFAG00000043649	SMARCA5	92	85.744	Macaca_fascicularis
ENSEBUG00000014773	SMARCA5	96	85.744	ENSMMUG00000000829	SMARCA5	97	86.272	Macaca_mulatta
ENSEBUG00000014773	SMARCA5	96	85.744	ENSMNEG00000031916	SMARCA5	92	85.744	Macaca_nemestrina
ENSEBUG00000014773	SMARCA5	96	85.744	ENSMLEG00000042393	SMARCA5	92	85.744	Mandrillus_leucophaeus
ENSEBUG00000014773	SMARCA5	96	85.552	ENSMGAG00000003517	SMARCA5	96	85.552	Meleagris_gallopavo
ENSEBUG00000014773	SMARCA5	96	85.640	ENSMAUG00000015902	Smarca5	95	85.640	Mesocricetus_auratus
ENSEBUG00000014773	SMARCA5	96	85.847	ENSMICG00000003971	SMARCA5	97	84.702	Microcebus_murinus
ENSEBUG00000014773	SMARCA5	96	85.434	ENSMOCG00000016986	-	92	85.434	Microtus_ochrogaster
ENSEBUG00000014773	SMARCA5	96	85.640	ENSMODG00000000391	SMARCA5	92	85.640	Monodelphis_domestica
ENSEBUG00000014773	SMARCA5	96	85.537	ENSMUSG00000031715	Smarca5	92	85.537	Mus_musculus
ENSEBUG00000014773	SMARCA5	96	85.640	MGP_PahariEiJ_G0022862	Smarca5	92	85.640	Mus_pahari
ENSEBUG00000014773	SMARCA5	96	85.744	ENSMLUG00000000468	SMARCA5	92	85.744	Myotis_lucifugus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSNGAG00000000441	Smarca5	92	85.640	Nannospalax_galili
ENSEBUG00000014773	SMARCA5	96	85.744	ENSNLEG00000005383	SMARCA5	92	85.744	Nomascus_leucogenys
ENSEBUG00000014773	SMARCA5	96	79.545	ENSMEUG00000001267	SMARCA5	100	79.545	Notamacropus_eugenii
ENSEBUG00000014773	SMARCA5	86	86.772	ENSOPRG00000014427	SMARCA5	84	86.772	Ochotona_princeps
ENSEBUG00000014773	SMARCA5	96	85.744	ENSOANG00000013921	SMARCA5	99	85.744	Ornithorhynchus_anatinus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSOCUG00000013042	SMARCA5	99	85.640	Oryctolagus_cuniculus
ENSEBUG00000014773	SMARCA5	96	85.847	ENSOGAG00000009702	SMARCA5	92	85.847	Otolemur_garnettii
ENSEBUG00000014773	SMARCA5	96	85.522	ENSOARG00000010589	SMARCA5	98	81.492	Ovis_aries
ENSEBUG00000014773	SMARCA5	96	85.744	ENSPPAG00000028523	SMARCA5	97	85.744	Pan_paniscus
ENSEBUG00000014773	SMARCA5	96	80.992	ENSPPRG00000004925	SMARCA5	92	81.508	Panthera_pardus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSPTIG00000020959	SMARCA5	93	85.744	Panthera_tigris_altaica
ENSEBUG00000014773	SMARCA5	96	85.744	ENSPTRG00000016472	SMARCA5	97	85.744	Pan_troglodytes
ENSEBUG00000014773	SMARCA5	96	85.744	ENSPANG00000001175	SMARCA5	92	85.744	Papio_anubis
ENSEBUG00000014773	SMARCA5	96	83.591	ENSPKIG00000015699	SMARCA5	98	83.333	Paramormyrops_kingsleyae
ENSEBUG00000014773	SMARCA5	97	83.967	ENSPKIG00000015885	SMARCA5	99	84.298	Paramormyrops_kingsleyae
ENSEBUG00000014773	SMARCA5	96	83.798	ENSPSIG00000004177	SMARCA5	97	83.798	Pelodiscus_sinensis
ENSEBUG00000014773	SMARCA5	96	83.128	ENSPMGG00000012316	SMARCA5	100	83.128	Periophthalmus_magnuspinnatus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSPEMG00000008060	Smarca5	95	85.640	Peromyscus_maniculatus_bairdii
ENSEBUG00000014773	SMARCA5	96	68.923	ENSPMAG00000006011	SMARCA5	96	69.160	Petromyzon_marinus
ENSEBUG00000014773	SMARCA5	65	88.535	ENSPMAG00000008026	SMARCA5	98	88.535	Petromyzon_marinus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSPCIG00000003926	SMARCA5	92	85.730	Phascolarctos_cinereus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSPPYG00000015091	SMARCA5	92	85.744	Pongo_abelii
ENSEBUG00000014773	SMARCA5	84	84.000	ENSPCAG00000014230	SMARCA5	83	84.000	Procavia_capensis
ENSEBUG00000014773	SMARCA5	96	83.574	ENSPCOG00000026744	SMARCA5	97	83.299	Propithecus_coquereli
ENSEBUG00000014773	SMARCA5	96	85.640	ENSPVAG00000006482	SMARCA5	92	85.640	Pteropus_vampyrus
ENSEBUG00000014773	SMARCA5	96	83.695	ENSPNAG00000027824	SMARCA5	94	84.125	Pygocentrus_nattereri
ENSEBUG00000014773	SMARCA5	96	85.537	ENSRNOG00000018149	Smarca5	97	85.537	Rattus_norvegicus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSRBIG00000044644	SMARCA5	92	85.744	Rhinopithecus_bieti
ENSEBUG00000014773	SMARCA5	96	85.744	ENSRROG00000029591	SMARCA5	97	85.744	Rhinopithecus_roxellana
ENSEBUG00000014773	SMARCA5	96	85.847	ENSSBOG00000036257	SMARCA5	98	81.721	Saimiri_boliviensis_boliviensis
ENSEBUG00000014773	SMARCA5	96	85.640	ENSSHAG00000008464	SMARCA5	97	85.640	Sarcophilus_harrisii
ENSEBUG00000014773	SMARCA5	96	84.004	ENSSFOG00015013252	SMARCA5	94	84.004	Scleropages_formosus
ENSEBUG00000014773	SMARCA5	96	84.211	ENSSPUG00000007604	SMARCA5	95	89.062	Sphenodon_punctatus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSSSCG00000009047	SMARCA5	92	85.744	Sus_scrofa
ENSEBUG00000014773	SMARCA5	99	83.217	ENSTGUG00000002408	SMARCA5	99	83.217	Taeniopygia_guttata
ENSEBUG00000014773	SMARCA5	95	85.759	ENSUAMG00000023495	SMARCA5	91	85.759	Ursus_americanus
ENSEBUG00000014773	SMARCA5	96	85.744	ENSUMAG00000015324	SMARCA5	94	85.744	Ursus_maritimus
ENSEBUG00000014773	SMARCA5	96	85.640	ENSVPAG00000008982	SMARCA5	98	81.845	Vicugna_pacos
ENSEBUG00000014773	SMARCA5	96	85.744	ENSVVUG00000017473	SMARCA5	92	85.744	Vulpes_vulpes
ENSEBUG00000014773	SMARCA5	94	83.209	ENSXETG00000017566	smarca5	95	83.157	Xenopus_tropicalis