EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000014828 (Gene tree)
Gene ID: -
Gene Symbol: pum2 (1 of many)
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 91756 bases
Position: chrFYBX02010017.1:46816-138571
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024086	PUF	PF00806.19	4e-72	1	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	2	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	3	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	4	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	5	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	6	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	7	8
ENSEBUP00000024086	PUF	PF00806.19	4e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024662	-	3294	-	ENSEBUP00000024086	853 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000014828	pum2	58	72.600	ENSEBUG00000004435	pum2	73	60.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014828	pum2	93	62.625	ENSG00000055917	PUM2	77	76.427	Homo_sapiens
ENSEBUG00000014828	pum2	72	76.574	ENSAPOG00000015756	pum2	68	71.461	Acanthochromis_polyacanthus
ENSEBUG00000014828	pum2	58	72.233	ENSAMEG00000002823	PUM2	71	63.445	Ailuropoda_melanoleuca
ENSEBUG00000014828	pum2	76	72.570	ENSACIG00000010646	pum2	66	65.085	Amphilophus_citrinellus
ENSEBUG00000014828	pum2	94	57.084	ENSAOCG00000016619	pum2	60	59.485	Amphiprion_ocellaris
ENSEBUG00000014828	pum2	92	59.199	ENSAPEG00000019924	pum2	68	71.461	Amphiprion_percula
ENSEBUG00000014828	pum2	92	58.313	ENSATEG00000015030	pum2	63	60.124	Anabas_testudineus
ENSEBUG00000014828	pum2	92	61.787	ENSAPLG00000010496	PUM2	63	62.907	Anas_platyrhynchos
ENSEBUG00000014828	pum2	93	62.375	ENSACAG00000010491	PUM2	71	63.000	Anolis_carolinensis
ENSEBUG00000014828	pum2	93	62.297	ENSANAG00000021807	PUM2	68	72.336	Aotus_nancymaae
ENSEBUG00000014828	pum2	92	58.698	ENSACLG00000022532	pum2	62	61.146	Astatotilapia_calliptera
ENSEBUG00000014828	pum2	73	76.923	ENSBTAG00000011155	PUM2	74	63.445	Bos_taurus
ENSEBUG00000014828	pum2	93	62.422	ENSCJAG00000007450	PUM2	68	72.336	Callithrix_jacchus
ENSEBUG00000014828	pum2	58	72.525	ENSCAFG00000003839	PUM2	70	63.387	Canis_familiaris
ENSEBUG00000014828	pum2	73	76.675	ENSCAFG00020025689	PUM2	68	70.000	Canis_lupus_dingo
ENSEBUG00000014828	pum2	72	76.923	ENSCHIG00000022180	PUM2	68	68.856	Capra_hircus
ENSEBUG00000014828	pum2	93	61.798	ENSTSYG00000014463	PUM2	68	75.422	Carlito_syrichta
ENSEBUG00000014828	pum2	75	74.059	ENSCAPG00000016888	PUM2	66	73.849	Cavia_aperea
ENSEBUG00000014828	pum2	93	62.484	ENSCPOG00000031996	PUM2	68	72.273	Cavia_porcellus
ENSEBUG00000014828	pum2	93	62.422	ENSCCAG00000037035	PUM2	72	72.336	Cebus_capucinus
ENSEBUG00000014828	pum2	93	62.469	ENSCATG00000043826	PUM2	72	76.427	Cercocebus_atys
ENSEBUG00000014828	pum2	83	76.675	ENSCLAG00000006048	PUM2	66	72.273	Chinchilla_lanigera
ENSEBUG00000014828	pum2	93	62.297	ENSCSAG00000008087	PUM2	71	63.400	Chlorocebus_sabaeus
ENSEBUG00000014828	pum2	77	57.292	ENSCHOG00000004575	PUM2	59	59.791	Choloepus_hoffmanni
ENSEBUG00000014828	pum2	79	76.574	ENSCPBG00000019966	PUM2	68	68.856	Chrysemys_picta_bellii
ENSEBUG00000014828	pum2	93	62.297	ENSCANG00000032797	PUM2	72	72.336	Colobus_angolensis_palliatus
ENSEBUG00000014828	pum2	93	62.547	ENSCGRG00001025023	Pum2	68	68.644	Cricetulus_griseus_chok1gshd
ENSEBUG00000014828	pum2	93	62.547	ENSCGRG00000001580	Pum2	68	68.644	Cricetulus_griseus_crigri
ENSEBUG00000014828	pum2	96	59.649	ENSCSEG00000020899	pum2	61	66.810	Cynoglossus_semilaevis
ENSEBUG00000014828	pum2	93	59.551	ENSCVAG00000002426	pum2	70	61.347	Cyprinodon_variegatus
ENSEBUG00000014828	pum2	96	58.513	ENSDARG00000061040	pum2	63	59.281	Danio_rerio
ENSEBUG00000014828	pum2	73	70.312	ENSDNOG00000006733	PUM2	70	60.050	Dasypus_novemcinctus
ENSEBUG00000014828	pum2	58	72.233	ENSDORG00000011453	Pum2	73	63.138	Dipodomys_ordii
ENSEBUG00000014828	pum2	74	86.611	ENSETEG00000017683	PUM2	57	86.611	Echinops_telfairi
ENSEBUG00000014828	pum2	73	76.675	ENSEASG00005009429	PUM2	68	68.644	Equus_asinus_asinus
ENSEBUG00000014828	pum2	73	76.675	ENSECAG00000021930	PUM2	74	63.263	Equus_caballus
ENSEBUG00000014828	pum2	92	58.073	ENSELUG00000014997	pum2	63	59.211	Esox_lucius
ENSEBUG00000014828	pum2	73	76.427	ENSFCAG00000027520	PUM2	72	69.783	Felis_catus
ENSEBUG00000014828	pum2	93	61.975	ENSFALG00000001759	PUM2	70	63.342	Ficedula_albicollis
ENSEBUG00000014828	pum2	84	76.427	ENSFDAG00000019685	PUM2	68	72.045	Fukomys_damarensis
ENSEBUG00000014828	pum2	72	77.078	ENSFHEG00000021596	pum2	67	69.048	Fundulus_heteroclitus
ENSEBUG00000014828	pum2	93	58.065	ENSGMOG00000006903	pum2	69	59.726	Gadus_morhua
ENSEBUG00000014828	pum2	79	77.078	ENSGALG00000016481	PUM2	64	70.172	Gallus_gallus
ENSEBUG00000014828	pum2	92	59.199	ENSGAFG00000013691	pum2	67	71.461	Gambusia_affinis
ENSEBUG00000014828	pum2	93	58.728	ENSGACG00000009670	pum2	70	59.901	Gasterosteus_aculeatus
ENSEBUG00000014828	pum2	93	61.605	ENSGAGG00000020698	PUM2	70	63.092	Gopherus_agassizii
ENSEBUG00000014828	pum2	93	62.547	ENSGGOG00000011374	PUM2	72	76.427	Gorilla_gorilla
ENSEBUG00000014828	pum2	92	76.923	ENSHBUG00000016453	pum2	61	76.923	Haplochromis_burtoni
ENSEBUG00000014828	pum2	93	62.078	ENSHGLG00000007892	PUM2	68	73.050	Heterocephalus_glaber_female
ENSEBUG00000014828	pum2	93	61.673	ENSHGLG00100015510	PUM2	71	62.099	Heterocephalus_glaber_male
ENSEBUG00000014828	pum2	92	59.649	ENSHCOG00000010119	pum2	63	60.648	Hippocampus_comes
ENSEBUG00000014828	pum2	93	61.940	ENSSTOG00000006262	PUM2	68	70.000	Ictidomys_tridecemlineatus
ENSEBUG00000014828	pum2	93	62.082	ENSJJAG00000020969	Pum2	68	74.468	Jaculus_jaculus
ENSEBUG00000014828	pum2	92	59.774	ENSKMAG00000017216	pum2	67	60.776	Kryptolebias_marmoratus
ENSEBUG00000014828	pum2	92	59.497	ENSLBEG00000020488	pum2	64	61.548	Labrus_bergylta
ENSEBUG00000014828	pum2	54	74.514	ENSLACG00000008723	PUM2	64	63.014	Latimeria_chalumnae
ENSEBUG00000014828	pum2	59	71.180	ENSLOCG00000017196	pum2	63	63.079	Lepisosteus_oculatus
ENSEBUG00000014828	pum2	93	61.642	ENSLAFG00000009278	PUM2	71	63.490	Loxodonta_africana
ENSEBUG00000014828	pum2	93	62.297	ENSMFAG00000000492	PUM2	72	76.427	Macaca_fascicularis
ENSEBUG00000014828	pum2	93	62.469	ENSMMUG00000023181	PUM2	68	72.336	Macaca_mulatta
ENSEBUG00000014828	pum2	93	62.297	ENSMNEG00000039659	PUM2	68	72.336	Macaca_nemestrina
ENSEBUG00000014828	pum2	93	62.297	ENSMLEG00000039243	PUM2	72	76.427	Mandrillus_leucophaeus
ENSEBUG00000014828	pum2	54	72.570	ENSMAMG00000006121	pum2	63	61.596	Mastacembelus_armatus
ENSEBUG00000014828	pum2	92	58.846	ENSMZEG00005000791	pum2	62	61.298	Maylandia_zebra
ENSEBUG00000014828	pum2	93	61.510	ENSMGAG00000014040	PUM2	70	63.125	Meleagris_gallopavo
ENSEBUG00000014828	pum2	93	62.640	ENSMAUG00000000311	Pum2	71	63.073	Mesocricetus_auratus
ENSEBUG00000014828	pum2	93	62.672	ENSMICG00000011647	PUM2	72	70.000	Microcebus_murinus
ENSEBUG00000014828	pum2	93	62.687	ENSMOCG00000013663	Pum2	71	63.412	Microtus_ochrogaster
ENSEBUG00000014828	pum2	92	59.375	ENSMMOG00000002975	pum2	70	61.270	Mola_mola
ENSEBUG00000014828	pum2	59	70.600	ENSMODG00000009811	PUM2	71	62.500	Monodelphis_domestica
ENSEBUG00000014828	pum2	72	76.574	ENSMALG00000022313	pum2	67	71.789	Monopterus_albus
ENSEBUG00000014828	pum2	93	62.112	MGP_CAROLIEiJ_G0017603	Pum2	100	60.606	Mus_caroli
ENSEBUG00000014828	pum2	93	62.112	ENSMUSG00000020594	Pum2	99	60.606	Mus_musculus
ENSEBUG00000014828	pum2	93	61.940	MGP_PahariEiJ_G0029361	Pum2	100	60.606	Mus_pahari
ENSEBUG00000014828	pum2	93	62.112	MGP_SPRETEiJ_G0018447	Pum2	100	60.606	Mus_spretus
ENSEBUG00000014828	pum2	58	72.525	ENSMPUG00000013734	PUM2	70	63.512	Mustela_putorius_furo
ENSEBUG00000014828	pum2	58	72.323	ENSMLUG00000007362	PUM2	71	63.060	Myotis_lucifugus
ENSEBUG00000014828	pum2	84	52.593	ENSNGAG00000016239	-	63	51.917	Nannospalax_galili
ENSEBUG00000014828	pum2	93	62.344	ENSNGAG00000016665	-	70	63.602	Nannospalax_galili
ENSEBUG00000014828	pum2	72	80.909	ENSNBRG00000020737	pum2	65	80.909	Neolamprologus_brichardi
ENSEBUG00000014828	pum2	94	61.529	ENSNLEG00000002509	PUM2	72	69.783	Nomascus_leucogenys
ENSEBUG00000014828	pum2	62	66.129	ENSMEUG00000016567	PUM2	63	73.016	Notamacropus_eugenii
ENSEBUG00000014828	pum2	58	51.786	ENSOPRG00000001963	PUM2	51	52.456	Ochotona_princeps
ENSEBUG00000014828	pum2	83	76.923	ENSODEG00000007823	PUM2	68	74.468	Octodon_degus
ENSEBUG00000014828	pum2	95	55.962	ENSONIG00000006119	pum2	63	61.174	Oreochromis_niloticus
ENSEBUG00000014828	pum2	58	72.525	ENSOCUG00000017908	PUM2	71	63.243	Oryctolagus_cuniculus
ENSEBUG00000014828	pum2	92	57.107	ENSORLG00000012611	pum2	68	68.398	Oryzias_latipes
ENSEBUG00000014828	pum2	92	56.737	ENSORLG00020014452	pum2	68	68.398	Oryzias_latipes_hni
ENSEBUG00000014828	pum2	92	56.860	ENSORLG00015009427	pum2	63	60.300	Oryzias_latipes_hsok
ENSEBUG00000014828	pum2	75	72.082	ENSOMEG00000005889	pum2	71	68.615	Oryzias_melastigma
ENSEBUG00000014828	pum2	73	76.923	ENSOGAG00000002187	PUM2	69	72.500	Otolemur_garnettii
ENSEBUG00000014828	pum2	58	72.727	ENSOARG00000017236	PUM2	70	63.445	Ovis_aries
ENSEBUG00000014828	pum2	96	62.625	ENSPPAG00000023095	PUM2	72	76.427	Pan_paniscus
ENSEBUG00000014828	pum2	73	76.427	ENSPPRG00000021443	PUM2	72	69.783	Panthera_pardus
ENSEBUG00000014828	pum2	73	76.427	ENSPTIG00000018982	PUM2	72	69.783	Panthera_tigris_altaica
ENSEBUG00000014828	pum2	94	61.776	ENSPTRG00000011692	PUM2	72	76.427	Pan_troglodytes
ENSEBUG00000014828	pum2	88	50.330	ENSPANG00000009393	PUM2	69	55.493	Papio_anubis
ENSEBUG00000014828	pum2	75	60.147	ENSPKIG00000023195	pum2	68	62.121	Paramormyrops_kingsleyae
ENSEBUG00000014828	pum2	93	61.605	ENSPSIG00000011626	PUM2	62	62.968	Pelodiscus_sinensis
ENSEBUG00000014828	pum2	72	76.826	ENSPMGG00000016123	pum2	68	69.130	Periophthalmus_magnuspinnatus
ENSEBUG00000014828	pum2	93	62.297	ENSPEMG00000008357	Pum2	71	63.217	Peromyscus_maniculatus_bairdii
ENSEBUG00000014828	pum2	93	59.926	ENSPMAG00000007038	pum2	71	59.828	Petromyzon_marinus
ENSEBUG00000014828	pum2	69	76.179	ENSPCIG00000022139	PUM2	69	74.232	Phascolarctos_cinereus
ENSEBUG00000014828	pum2	92	57.473	ENSPFOG00000019208	pum2	63	59.443	Poecilia_formosa
ENSEBUG00000014828	pum2	92	59.324	ENSPLAG00000001826	pum2	67	71.461	Poecilia_latipinna
ENSEBUG00000014828	pum2	92	59.199	ENSPMEG00000015766	pum2	68	61.222	Poecilia_mexicana
ENSEBUG00000014828	pum2	72	76.071	ENSPREG00000006905	pum2	67	71.233	Poecilia_reticulata
ENSEBUG00000014828	pum2	93	62.422	ENSPPYG00000012617	PUM2	71	63.524	Pongo_abelii
ENSEBUG00000014828	pum2	93	62.391	ENSPCOG00000019636	PUM2	69	70.000	Propithecus_coquereli
ENSEBUG00000014828	pum2	58	61.569	ENSPVAG00000002920	PUM2	71	56.646	Pteropus_vampyrus
ENSEBUG00000014828	pum2	92	80.909	ENSPNYG00000022901	pum2	60	80.909	Pundamilia_nyererei
ENSEBUG00000014828	pum2	93	58.984	ENSPNAG00000008025	pum2	69	68.807	Pygocentrus_nattereri
ENSEBUG00000014828	pum2	93	60.199	ENSRNOG00000006180	Pum2	68	73.995	Rattus_norvegicus
ENSEBUG00000014828	pum2	93	62.297	ENSRBIG00000044880	PUM2	72	72.336	Rhinopithecus_bieti
ENSEBUG00000014828	pum2	93	62.594	ENSSBOG00000022007	PUM2	72	76.427	Saimiri_boliviensis_boliviensis
ENSEBUG00000014828	pum2	55	72.516	ENSSHAG00000002778	PUM2	71	61.247	Sarcophilus_harrisii
ENSEBUG00000014828	pum2	92	62.657	ENSSFOG00015003476	pum2	68	62.116	Scleropages_formosus
ENSEBUG00000014828	pum2	92	58.292	ENSSMAG00000018236	pum2	63	60.517	Scophthalmus_maximus
ENSEBUG00000014828	pum2	92	59.125	ENSSDUG00000001800	pum2	68	61.567	Seriola_dumerili
ENSEBUG00000014828	pum2	92	59.250	ENSSLDG00000000981	pum2	63	61.519	Seriola_lalandi_dorsalis
ENSEBUG00000014828	pum2	93	53.049	ENSSARG00000010992	PUM2	57	54.394	Sorex_araneus
ENSEBUG00000014828	pum2	93	62.594	ENSSPUG00000017012	PUM2	71	62.594	Sphenodon_punctatus
ENSEBUG00000014828	pum2	92	59.074	ENSSPAG00000022948	pum2	68	71.461	Stegastes_partitus
ENSEBUG00000014828	pum2	73	76.675	ENSSSCG00000008600	PUM2	74	63.263	Sus_scrofa
ENSEBUG00000014828	pum2	93	62.099	ENSTGUG00000013149	PUM2	70	63.342	Taeniopygia_guttata
ENSEBUG00000014828	pum2	93	58.758	ENSTRUG00000018167	pum2	64	59.752	Takifugu_rubripes
ENSEBUG00000014828	pum2	93	58.302	ENSTNIG00000003116	pum2	63	60.248	Tetraodon_nigroviridis
ENSEBUG00000014828	pum2	72	74.262	ENSTBEG00000008729	PUM2	57	73.029	Tupaia_belangeri
ENSEBUG00000014828	pum2	58	71.831	ENSTTRG00000004887	PUM2	68	63.151	Tursiops_truncatus
ENSEBUG00000014828	pum2	73	76.675	ENSUAMG00000008120	PUM2	95	70.000	Ursus_americanus
ENSEBUG00000014828	pum2	73	76.675	ENSUMAG00000023198	PUM2	68	70.000	Ursus_maritimus
ENSEBUG00000014828	pum2	58	72.233	ENSVPAG00000005056	PUM2	71	63.119	Vicugna_pacos
ENSEBUG00000014828	pum2	73	76.675	ENSVVUG00000014829	PUM2	68	70.000	Vulpes_vulpes
ENSEBUG00000014828	pum2	92	60.224	ENSXETG00000008903	pum2	63	59.950	Xenopus_tropicalis
ENSEBUG00000014828	pum2	92	59.199	ENSXCOG00000002556	pum2	68	61.222	Xiphophorus_couchianus
ENSEBUG00000014828	pum2	92	59.800	ENSXMAG00000017682	pum2	67	71.461	Xiphophorus_maculatus