EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000014939 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 178121 bases
Position: chrFYBX02009642.1:302471-480591
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024258	RNase_H2_suC	PF08615.11	1.8e-15	1	1
ENSEBUP00000024248	RNase_H2_suC	PF08615.11	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024824	-	4376	-	ENSEBUP00000024248	200 (aa)	-	-
ENSEBUT00000024834	-	4127	-	ENSEBUP00000024258	155 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014939	rnaseh2c	69	54.630	ENSAPOG00000012901	rnaseh2c	77	54.630	Acanthochromis_polyacanthus
ENSEBUG00000014939	rnaseh2c	77	46.667	ENSACIG00000022433	rnaseh2c	86	46.667	Amphilophus_citrinellus
ENSEBUG00000014939	rnaseh2c	69	53.704	ENSAOCG00000016855	rnaseh2c	78	53.704	Amphiprion_ocellaris
ENSEBUG00000014939	rnaseh2c	69	53.704	ENSAPEG00000009850	rnaseh2c	78	53.704	Amphiprion_percula
ENSEBUG00000014939	rnaseh2c	80	50.794	ENSATEG00000014395	rnaseh2c	88	50.794	Anabas_testudineus
ENSEBUG00000014939	rnaseh2c	77	45.833	ENSACLG00000016950	rnaseh2c	86	45.833	Astatotilapia_calliptera
ENSEBUG00000014939	rnaseh2c	79	44.715	ENSAMXG00000001210	rnaseh2c	89	44.715	Astyanax_mexicanus
ENSEBUG00000014939	rnaseh2c	79	45.161	ENSCPBG00000023408	-	87	45.161	Chrysemys_picta_bellii
ENSEBUG00000014939	rnaseh2c	69	50.000	ENSCSEG00000005808	rnaseh2c	80	50.000	Cynoglossus_semilaevis
ENSEBUG00000014939	rnaseh2c	74	49.138	ENSCVAG00000006337	rnaseh2c	81	49.138	Cyprinodon_variegatus
ENSEBUG00000014939	rnaseh2c	69	45.370	ENSDARG00000089637	rnaseh2c	77	45.370	Danio_rerio
ENSEBUG00000014939	rnaseh2c	76	49.587	ENSELUG00000007345	rnaseh2c	88	49.587	Esox_lucius
ENSEBUG00000014939	rnaseh2c	74	53.043	ENSFHEG00000002419	rnaseh2c	80	53.043	Fundulus_heteroclitus
ENSEBUG00000014939	rnaseh2c	54	45.783	ENSGMOG00000008727	rnaseh2c	89	45.783	Gadus_morhua
ENSEBUG00000014939	rnaseh2c	77	49.587	ENSGAFG00000016755	rnaseh2c	70	49.587	Gambusia_affinis
ENSEBUG00000014939	rnaseh2c	79	45.161	ENSGAGG00000008193	-	87	45.161	Gopherus_agassizii
ENSEBUG00000014939	rnaseh2c	77	46.667	ENSHBUG00000012806	rnaseh2c	86	48.333	Haplochromis_burtoni
ENSEBUG00000014939	rnaseh2c	78	47.541	ENSHCOG00000007177	rnaseh2c	88	47.541	Hippocampus_comes
ENSEBUG00000014939	rnaseh2c	77	44.186	ENSIPUG00000018044	rnaseh2c	81	46.429	Ictalurus_punctatus
ENSEBUG00000014939	rnaseh2c	80	49.206	ENSKMAG00000004184	rnaseh2c	88	49.206	Kryptolebias_marmoratus
ENSEBUG00000014939	rnaseh2c	75	50.000	ENSLBEG00000005742	rnaseh2c	77	52.778	Labrus_bergylta
ENSEBUG00000014939	rnaseh2c	69	48.148	ENSLACG00000010120	-	75	48.148	Latimeria_chalumnae
ENSEBUG00000014939	rnaseh2c	81	47.619	ENSMAMG00000021610	rnaseh2c	88	47.619	Mastacembelus_armatus
ENSEBUG00000014939	rnaseh2c	77	48.333	ENSMZEG00005004796	rnaseh2c	86	48.333	Maylandia_zebra
ENSEBUG00000014939	rnaseh2c	78	48.361	ENSMMOG00000002869	rnaseh2c	94	48.361	Mola_mola
ENSEBUG00000014939	rnaseh2c	80	50.394	ENSMALG00000012198	rnaseh2c	88	50.394	Monopterus_albus
ENSEBUG00000014939	rnaseh2c	77	46.667	ENSNBRG00000001462	rnaseh2c	86	48.333	Neolamprologus_brichardi
ENSEBUG00000014939	rnaseh2c	77	45.833	ENSONIG00000005338	rnaseh2c	85	45.833	Oreochromis_niloticus
ENSEBUG00000014939	rnaseh2c	69	50.000	ENSORLG00000023473	rnaseh2c	78	50.000	Oryzias_latipes
ENSEBUG00000014939	rnaseh2c	69	49.074	ENSORLG00020019053	rnaseh2c	71	49.074	Oryzias_latipes_hni
ENSEBUG00000014939	rnaseh2c	69	50.000	ENSORLG00015017067	rnaseh2c	71	50.000	Oryzias_latipes_hsok
ENSEBUG00000014939	rnaseh2c	68	49.533	ENSOMEG00000018607	rnaseh2c	77	49.533	Oryzias_melastigma
ENSEBUG00000014939	rnaseh2c	79	45.161	ENSPKIG00000019331	rnaseh2c	78	50.000	Paramormyrops_kingsleyae
ENSEBUG00000014939	rnaseh2c	74	50.000	ENSPFOG00000009415	rnaseh2c	81	50.000	Poecilia_formosa
ENSEBUG00000014939	rnaseh2c	74	50.000	ENSPLAG00000023330	rnaseh2c	81	50.000	Poecilia_latipinna
ENSEBUG00000014939	rnaseh2c	74	50.000	ENSPMEG00000003696	rnaseh2c	81	50.000	Poecilia_mexicana
ENSEBUG00000014939	rnaseh2c	74	48.000	ENSPREG00000015384	rnaseh2c	60	48.000	Poecilia_reticulata
ENSEBUG00000014939	rnaseh2c	77	46.667	ENSPNYG00000014766	rnaseh2c	86	48.333	Pundamilia_nyererei
ENSEBUG00000014939	rnaseh2c	79	45.528	ENSPNAG00000019111	rnaseh2c	88	45.528	Pygocentrus_nattereri
ENSEBUG00000014939	rnaseh2c	79	48.387	ENSSFOG00015005760	rnaseh2c	91	48.387	Scleropages_formosus
ENSEBUG00000014939	rnaseh2c	78	48.361	ENSSMAG00000017738	rnaseh2c	78	53.704	Scophthalmus_maximus
ENSEBUG00000014939	rnaseh2c	74	52.586	ENSSDUG00000017285	rnaseh2c	81	52.586	Seriola_dumerili
ENSEBUG00000014939	rnaseh2c	74	50.862	ENSSLDG00000016030	rnaseh2c	81	50.862	Seriola_lalandi_dorsalis
ENSEBUG00000014939	rnaseh2c	79	44.000	ENSSPUG00000000842	-	82	44.000	Sphenodon_punctatus
ENSEBUG00000014939	rnaseh2c	70	53.211	ENSSPAG00000007536	rnaseh2c	79	53.211	Stegastes_partitus
ENSEBUG00000014939	rnaseh2c	83	41.221	ENSTRUG00000021845	rnaseh2c	90	41.860	Takifugu_rubripes
ENSEBUG00000014939	rnaseh2c	82	44.186	ENSTNIG00000000431	rnaseh2c	90	44.186	Tetraodon_nigroviridis
ENSEBUG00000014939	rnaseh2c	79	47.967	ENSXETG00000032466	-	88	47.967	Xenopus_tropicalis
ENSEBUG00000014939	rnaseh2c	69	52.778	ENSXCOG00000001611	rnaseh2c	79	52.778	Xiphophorus_couchianus
ENSEBUG00000014939	rnaseh2c	69	50.000	ENSXMAG00000003147	rnaseh2c	65	52.778	Xiphophorus_maculatus