EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000014994 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 142888 bases
Position: chrFYBX02010610.1:513648-656535
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024376	ResIII	PF04851.15	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000024953	-	3348	-	ENSEBUP00000024376	1115 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000014994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000014994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000014994	chd2	50	43.772	ENSEBUG00000014773	SMARCA5	56	43.929
ENSEBUG00000014994	chd2	50	44.326	ENSEBUG00000001239	smarca5	53	44.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000014994	chd2	83	74.468	ENSG00000173575	CHD2	87	94.898	Homo_sapiens
ENSEBUG00000014994	chd2	85	76.087	ENSAPOG00000008913	chd2	52	75.532	Acanthochromis_polyacanthus
ENSEBUG00000014994	chd2	59	77.415	ENSAMEG00000010805	-	62	75.186	Ailuropoda_melanoleuca
ENSEBUG00000014994	chd2	79	76.087	ENSAOCG00000016332	chd2	52	75.532	Amphiprion_ocellaris
ENSEBUG00000014994	chd2	85	76.087	ENSAPEG00000016676	chd2	53	75.532	Amphiprion_percula
ENSEBUG00000014994	chd2	85	75.532	ENSATEG00000005246	chd2	51	75.532	Anabas_testudineus
ENSEBUG00000014994	chd2	83	76.087	ENSAPLG00000011141	-	50	75.532	Anas_platyrhynchos
ENSEBUG00000014994	chd2	75	75.000	ENSACAG00000000088	-	50	74.468	Anolis_carolinensis
ENSEBUG00000014994	chd2	83	75.824	ENSANAG00000024017	-	51	74.468	Aotus_nancymaae
ENSEBUG00000014994	chd2	79	76.087	ENSACLG00000021370	chd2	54	75.532	Astatotilapia_calliptera
ENSEBUG00000014994	chd2	54	80.130	ENSBTAG00000017776	CHD2	78	80.130	Bos_taurus
ENSEBUG00000014994	chd2	83	75.824	ENSCJAG00000020444	-	50	75.000	Callithrix_jacchus
ENSEBUG00000014994	chd2	83	74.468	ENSCAFG00000010998	CHD2	59	71.410	Canis_familiaris
ENSEBUG00000014994	chd2	83	76.087	ENSCHIG00000022261	-	50	75.532	Capra_hircus
ENSEBUG00000014994	chd2	83	74.468	ENSTSYG00000003272	-	52	74.468	Carlito_syrichta
ENSEBUG00000014994	chd2	80	75.623	ENSCPOG00000005800	-	50	74.468	Cavia_porcellus
ENSEBUG00000014994	chd2	83	75.000	ENSCCAG00000035304	-	50	75.000	Cebus_capucinus
ENSEBUG00000014994	chd2	83	75.824	ENSCATG00000031069	-	50	75.000	Cercocebus_atys
ENSEBUG00000014994	chd2	83	74.468	ENSCLAG00000016269	-	50	74.468	Chinchilla_lanigera
ENSEBUG00000014994	chd2	83	74.468	ENSCSAG00000017007	-	50	74.468	Chlorocebus_sabaeus
ENSEBUG00000014994	chd2	84	73.472	ENSCPBG00000018049	-	77	80.000	Chrysemys_picta_bellii
ENSEBUG00000014994	chd2	78	58.683	ENSCSAVG00000007580	-	80	58.128	Ciona_savignyi
ENSEBUG00000014994	chd2	83	75.824	ENSCANG00000038126	-	50	75.000	Colobus_angolensis_palliatus
ENSEBUG00000014994	chd2	87	74.468	ENSCGRG00001006649	Chd2	50	74.468	Cricetulus_griseus_chok1gshd
ENSEBUG00000014994	chd2	87	74.468	ENSCGRG00000018154	Chd2	50	74.468	Cricetulus_griseus_crigri
ENSEBUG00000014994	chd2	80	75.000	ENSCSEG00000003646	chd2	52	74.468	Cynoglossus_semilaevis
ENSEBUG00000014994	chd2	89	66.035	ENSCVAG00000002427	chd2	63	66.242	Cyprinodon_variegatus
ENSEBUG00000014994	chd2	79	72.340	ENSDARG00000060687	chd2	58	68.943	Danio_rerio
ENSEBUG00000014994	chd2	83	76.596	ENSDNOG00000009796	-	50	76.596	Dasypus_novemcinctus
ENSEBUG00000014994	chd2	83	76.923	ENSEASG00005015526	-	82	72.562	Equus_asinus_asinus
ENSEBUG00000014994	chd2	75	74.468	ENSELUG00000017981	chd2	50	74.468	Esox_lucius
ENSEBUG00000014994	chd2	83	76.087	ENSFALG00000010369	-	56	75.532	Ficedula_albicollis
ENSEBUG00000014994	chd2	83	75.532	ENSFDAG00000020651	-	50	75.532	Fukomys_damarensis
ENSEBUG00000014994	chd2	79	76.087	ENSFHEG00000002119	chd2	54	76.087	Fundulus_heteroclitus
ENSEBUG00000014994	chd2	79	74.468	ENSGMOG00000002890	chd2	55	74.468	Gadus_morhua
ENSEBUG00000014994	chd2	83	76.087	ENSGALG00000006949	CHD2	50	75.532	Gallus_gallus
ENSEBUG00000014994	chd2	80	76.087	ENSGACG00000013246	chd2	55	75.532	Gasterosteus_aculeatus
ENSEBUG00000014994	chd2	84	73.677	ENSGAGG00000013176	-	78	79.967	Gopherus_agassizii
ENSEBUG00000014994	chd2	83	75.824	ENSGGOG00000015677	CHD2	51	74.468	Gorilla_gorilla
ENSEBUG00000014994	chd2	79	76.087	ENSHBUG00000017947	chd2	54	75.532	Haplochromis_burtoni
ENSEBUG00000014994	chd2	83	74.468	ENSHGLG00000004435	CHD2	50	74.468	Heterocephalus_glaber_female
ENSEBUG00000014994	chd2	83	74.468	ENSHGLG00100016376	-	50	74.468	Heterocephalus_glaber_male
ENSEBUG00000014994	chd2	83	73.913	ENSHCOG00000008855	chd2	50	73.404	Hippocampus_comes
ENSEBUG00000014994	chd2	80	72.826	ENSIPUG00000000488	chd2	57	70.263	Ictalurus_punctatus
ENSEBUG00000014994	chd2	83	74.468	ENSSTOG00000001270	-	50	74.468	Ictidomys_tridecemlineatus
ENSEBUG00000014994	chd2	83	75.532	ENSJJAG00000000213	Chd2	56	75.532	Jaculus_jaculus
ENSEBUG00000014994	chd2	75	75.532	ENSKMAG00000015849	chd2	57	75.532	Kryptolebias_marmoratus
ENSEBUG00000014994	chd2	67	73.462	ENSLAFG00000016885	-	76	80.619	Loxodonta_africana
ENSEBUG00000014994	chd2	83	75.824	ENSMFAG00000033343	-	50	75.000	Macaca_fascicularis
ENSEBUG00000014994	chd2	83	74.468	ENSMMUG00000011782	-	50	74.468	Macaca_mulatta
ENSEBUG00000014994	chd2	83	75.824	ENSMNEG00000036875	-	50	75.000	Macaca_nemestrina
ENSEBUG00000014994	chd2	83	75.824	ENSMLEG00000035026	-	50	75.000	Mandrillus_leucophaeus
ENSEBUG00000014994	chd2	85	77.174	ENSMAMG00000009082	chd2	52	76.596	Mastacembelus_armatus
ENSEBUG00000014994	chd2	79	76.087	ENSMZEG00005021333	chd2	54	75.532	Maylandia_zebra
ENSEBUG00000014994	chd2	83	76.087	ENSMGAG00000008966	-	50	75.532	Meleagris_gallopavo
ENSEBUG00000014994	chd2	83	74.468	ENSMICG00000000332	-	50	74.468	Microcebus_murinus
ENSEBUG00000014994	chd2	83	74.468	ENSMOCG00000015124	Chd2	50	74.468	Microtus_ochrogaster
ENSEBUG00000014994	chd2	84	70.775	ENSMODG00000013158	-	60	70.935	Monodelphis_domestica
ENSEBUG00000014994	chd2	79	76.087	ENSMALG00000007755	chd2	51	75.532	Monopterus_albus
ENSEBUG00000014994	chd2	83	75.532	MGP_CAROLIEiJ_G0029860	Chd2	50	75.532	Mus_caroli
ENSEBUG00000014994	chd2	83	75.532	ENSMUSG00000078671	Chd2	50	75.532	Mus_musculus
ENSEBUG00000014994	chd2	83	75.532	MGP_PahariEiJ_G0013082	Chd2	50	75.532	Mus_pahari
ENSEBUG00000014994	chd2	83	75.532	MGP_SPRETEiJ_G0030962	Chd2	50	75.532	Mus_spretus
ENSEBUG00000014994	chd2	83	74.468	ENSMPUG00000017577	-	50	74.468	Mustela_putorius_furo
ENSEBUG00000014994	chd2	83	73.333	ENSMLUG00000009292	-	50	71.410	Myotis_lucifugus
ENSEBUG00000014994	chd2	83	74.468	ENSNGAG00000010792	Chd2	50	74.468	Nannospalax_galili
ENSEBUG00000014994	chd2	79	76.087	ENSNBRG00000020591	chd2	52	75.532	Neolamprologus_brichardi
ENSEBUG00000014994	chd2	71	73.404	ENSMEUG00000001522	-	52	67.590	Notamacropus_eugenii
ENSEBUG00000014994	chd2	83	74.468	ENSODEG00000016028	-	50	74.468	Octodon_degus
ENSEBUG00000014994	chd2	79	76.087	ENSONIG00000015136	chd2	50	75.532	Oreochromis_niloticus
ENSEBUG00000014994	chd2	83	74.468	ENSOANG00000004385	-	61	74.468	Ornithorhynchus_anatinus
ENSEBUG00000014994	chd2	83	75.532	ENSOCUG00000001628	-	58	83.094	Oryctolagus_cuniculus
ENSEBUG00000014994	chd2	85	69.975	ENSORLG00000008403	chd2	55	70.528	Oryzias_latipes
ENSEBUG00000014994	chd2	85	69.975	ENSORLG00020004138	chd2	54	70.528	Oryzias_latipes_hni
ENSEBUG00000014994	chd2	79	77.528	ENSOMEG00000005831	chd2	52	77.528	Oryzias_melastigma
ENSEBUG00000014994	chd2	83	75.000	ENSOGAG00000010399	-	50	74.468	Otolemur_garnettii
ENSEBUG00000014994	chd2	83	76.087	ENSOARG00000010343	-	51	75.532	Ovis_aries
ENSEBUG00000014994	chd2	83	74.468	ENSPPAG00000030381	-	51	74.468	Pan_paniscus
ENSEBUG00000014994	chd2	83	74.468	ENSPTRG00000007478	CHD2	50	74.468	Pan_troglodytes
ENSEBUG00000014994	chd2	87	71.502	ENSPKIG00000000495	chd2	58	70.603	Paramormyrops_kingsleyae
ENSEBUG00000014994	chd2	75	75.532	ENSPMGG00000009941	chd2	58	75.532	Periophthalmus_magnuspinnatus
ENSEBUG00000014994	chd2	83	74.468	ENSPEMG00000019507	Chd2	50	74.468	Peromyscus_maniculatus_bairdii
ENSEBUG00000014994	chd2	84	73.896	ENSPCIG00000009417	-	81	71.429	Phascolarctos_cinereus
ENSEBUG00000014994	chd2	79	76.087	ENSPLAG00000005067	chd2	50	76.087	Poecilia_latipinna
ENSEBUG00000014994	chd2	83	74.468	ENSPCOG00000028084	-	50	74.468	Propithecus_coquereli
ENSEBUG00000014994	chd2	79	76.087	ENSPNYG00000010273	chd2	54	75.532	Pundamilia_nyererei
ENSEBUG00000014994	chd2	85	70.483	ENSPNAG00000016719	chd2	58	71.410	Pygocentrus_nattereri
ENSEBUG00000014994	chd2	83	75.532	ENSRNOG00000012716	Chd2	50	75.532	Rattus_norvegicus
ENSEBUG00000014994	chd2	83	73.333	ENSRBIG00000036875	-	50	71.795	Rhinopithecus_bieti
ENSEBUG00000014994	chd2	83	76.923	ENSRROG00000041087	-	50	76.087	Rhinopithecus_roxellana
ENSEBUG00000014994	chd2	83	75.824	ENSSBOG00000023754	-	50	75.824	Saimiri_boliviensis_boliviensis
ENSEBUG00000014994	chd2	83	73.404	ENSSHAG00000012513	-	57	71.063	Sarcophilus_harrisii
ENSEBUG00000014994	chd2	88	71.410	ENSSFOG00015023759	chd2	51	70.823	Scleropages_formosus
ENSEBUG00000014994	chd2	79	75.824	ENSSMAG00000001726	chd2	53	75.824	Scophthalmus_maximus
ENSEBUG00000014994	chd2	79	75.824	ENSSLDG00000001146	chd2	56	70.218	Seriola_lalandi_dorsalis
ENSEBUG00000014994	chd2	83	76.087	ENSSPUG00000011266	-	51	76.087	Sphenodon_punctatus
ENSEBUG00000014994	chd2	79	76.087	ENSSPAG00000016452	chd2	55	70.180	Stegastes_partitus
ENSEBUG00000014994	chd2	83	74.468	ENSSSCG00000002266	-	55	74.468	Sus_scrofa
ENSEBUG00000014994	chd2	83	75.000	ENSTGUG00000008540	-	56	74.468	Taeniopygia_guttata
ENSEBUG00000014994	chd2	77	68.421	ENSTRUG00000008842	chd2	50	68.421	Takifugu_rubripes
ENSEBUG00000014994	chd2	71	70.153	ENSTNIG00000010760	chd2	63	69.693	Tetraodon_nigroviridis
ENSEBUG00000014994	chd2	83	75.532	ENSTTRG00000000430	-	50	75.532	Tursiops_truncatus
ENSEBUG00000014994	chd2	83	74.468	ENSUMAG00000000083	-	51	74.468	Ursus_maritimus
ENSEBUG00000014994	chd2	82	71.355	ENSXETG00000024129	chd2	66	70.361	Xenopus_tropicalis
ENSEBUG00000014994	chd2	82	66.667	ENSXCOG00000020255	chd2	52	70.528	Xiphophorus_couchianus
ENSEBUG00000014994	chd2	79	76.087	ENSXMAG00000002707	chd2	52	76.087	Xiphophorus_maculatus