EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015161 (Gene tree)
Gene ID: -
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1%2C nucleolar pre-rRNA processing protein%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 350383 bases
Position: chrFYBX02009704.1:12940-363322
Accession: ZDB-GENE-030131-4917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024616	NUC153	PF08159.12	1.3e-11	1	1
ENSEBUP00000024629	NUC153	PF08159.12	1.3e-11	1	1
ENSEBUP00000024661	NUC153	PF08159.12	1.1e-10	1	1
ENSEBUP00000024580	NUC153	PF08159.12	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025266	-	3119	-	ENSEBUP00000024693	701 (aa)	-	-
ENSEBUT00000025206	-	4667	-	ENSEBUP00000024629	845 (aa)	-	-
ENSEBUT00000025236	-	3978	-	ENSEBUP00000024661	667 (aa)	-	-
ENSEBUT00000025156	-	4426	-	ENSEBUP00000024580	793 (aa)	-	-
ENSEBUT00000025192	-	5207	-	ENSEBUP00000024616	845 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015161	esf1	87	49.053	ENSG00000089048	ESF1	80	53.786	Homo_sapiens
ENSEBUG00000015161	esf1	78	41.941	ENSAPOG00000003004	esf1	99	43.462	Acanthochromis_polyacanthus
ENSEBUG00000015161	esf1	99	44.058	ENSAMEG00000008830	ESF1	65	50.512	Ailuropoda_melanoleuca
ENSEBUG00000015161	esf1	77	72.727	ENSACIG00000018305	esf1	95	69.231	Amphilophus_citrinellus
ENSEBUG00000015161	esf1	76	70.149	ENSAOCG00000006033	esf1	88	65.823	Amphiprion_ocellaris
ENSEBUG00000015161	esf1	76	70.149	ENSAPEG00000022385	esf1	89	65.823	Amphiprion_percula
ENSEBUG00000015161	esf1	77	73.846	ENSATEG00000016321	esf1	85	73.333	Anabas_testudineus
ENSEBUG00000015161	esf1	99	43.569	ENSAPLG00000012113	ESF1	66	50.086	Anas_platyrhynchos
ENSEBUG00000015161	esf1	87	49.406	ENSACAG00000000963	ESF1	66	50.426	Anolis_carolinensis
ENSEBUG00000015161	esf1	99	43.001	ENSANAG00000036778	ESF1	65	49.915	Aotus_nancymaae
ENSEBUG00000015161	esf1	78	71.642	ENSACLG00000002972	esf1	88	68.056	Astatotilapia_calliptera
ENSEBUG00000015161	esf1	77	64.865	ENSAMXG00000001172	esf1	88	68.657	Astyanax_mexicanus
ENSEBUG00000015161	esf1	87	48.966	ENSBTAG00000007130	ESF1	65	49.914	Bos_taurus
ENSEBUG00000015161	esf1	99	44.432	ENSCJAG00000004640	ESF1	66	50.085	Callithrix_jacchus
ENSEBUG00000015161	esf1	87	49.488	ENSCAFG00000005587	ESF1	65	50.085	Canis_familiaris
ENSEBUG00000015161	esf1	87	49.488	ENSCAFG00020027530	ESF1	65	50.085	Canis_lupus_dingo
ENSEBUG00000015161	esf1	99	43.088	ENSCHIG00000021188	ESF1	67	49.742	Capra_hircus
ENSEBUG00000015161	esf1	99	44.244	ENSTSYG00000009956	ESF1	66	49.915	Carlito_syrichta
ENSEBUG00000015161	esf1	76	65.672	ENSCAPG00000010333	-	93	55.556	Cavia_aperea
ENSEBUG00000015161	esf1	52	45.480	ENSCAPG00000010466	-	80	59.551	Cavia_aperea
ENSEBUG00000015161	esf1	87	50.856	ENSCPOG00000014027	-	67	50.510	Cavia_porcellus
ENSEBUG00000015161	esf1	99	43.409	ENSCCAG00000024521	ESF1	65	50.085	Cebus_capucinus
ENSEBUG00000015161	esf1	87	50.000	ENSCATG00000042792	ESF1	99	44.305	Cercocebus_atys
ENSEBUG00000015161	esf1	99	44.332	ENSCLAG00000013266	-	67	50.255	Chinchilla_lanigera
ENSEBUG00000015161	esf1	87	49.225	ENSCSAG00000011777	ESF1	65	49.915	Chlorocebus_sabaeus
ENSEBUG00000015161	esf1	72	46.646	ENSCSAVG00000009015	-	88	50.704	Ciona_savignyi
ENSEBUG00000015161	esf1	87	49.313	ENSCANG00000030674	ESF1	65	49.915	Colobus_angolensis_palliatus
ENSEBUG00000015161	esf1	99	43.936	ENSCGRG00001018257	Esf1	68	50.082	Cricetulus_griseus_chok1gshd
ENSEBUG00000015161	esf1	76	67.692	ENSCSEG00000001159	esf1	89	53.125	Cynoglossus_semilaevis
ENSEBUG00000015161	esf1	76	70.769	ENSCVAG00000007894	esf1	91	70.270	Cyprinodon_variegatus
ENSEBUG00000015161	esf1	77	76.119	ENSDARG00000008740	esf1	87	71.605	Danio_rerio
ENSEBUG00000015161	esf1	87	50.000	ENSDNOG00000019409	ESF1	99	44.903	Dasypus_novemcinctus
ENSEBUG00000015161	esf1	87	49.915	ENSDORG00000016313	Esf1	68	49.584	Dipodomys_ordii
ENSEBUG00000015161	esf1	75	51.471	FBgn0024364	CG11417	85	53.030	Drosophila_melanogaster
ENSEBUG00000015161	esf1	66	66.667	ENSETEG00000004471	ESF1	63	66.667	Echinops_telfairi
ENSEBUG00000015161	esf1	99	44.432	ENSEASG00005001777	ESF1	65	51.027	Equus_asinus_asinus
ENSEBUG00000015161	esf1	99	44.507	ENSECAG00000019188	ESF1	65	51.107	Equus_caballus
ENSEBUG00000015161	esf1	87	34.192	ENSEEUG00000015837	-	87	34.134	Erinaceus_europaeus
ENSEBUG00000015161	esf1	87	44.243	ENSELUG00000000408	esf1	73	45.677	Esox_lucius
ENSEBUG00000015161	esf1	99	43.126	ENSFCAG00000000919	ESF1	65	50.767	Felis_catus
ENSEBUG00000015161	esf1	87	49.138	ENSFALG00000010914	ESF1	65	50.086	Ficedula_albicollis
ENSEBUG00000015161	esf1	99	44.380	ENSFDAG00000014777	ESF1	67	51.282	Fukomys_damarensis
ENSEBUG00000015161	esf1	78	45.936	ENSFHEG00000014984	esf1	99	46.529	Fundulus_heteroclitus
ENSEBUG00000015161	esf1	99	42.237	ENSGALG00000034768	ESF1	99	43.693	Gallus_gallus
ENSEBUG00000015161	esf1	77	58.209	ENSGAFG00000000540	esf1	91	55.405	Gambusia_affinis
ENSEBUG00000015161	esf1	87	48.881	ENSGGOG00000006692	ESF1	65	49.744	Gorilla_gorilla
ENSEBUG00000015161	esf1	86	73.134	ENSHBUG00000001890	esf1	88	69.444	Haplochromis_burtoni
ENSEBUG00000015161	esf1	87	49.742	ENSHGLG00000011505	ESF1	67	49.915	Heterocephalus_glaber_female
ENSEBUG00000015161	esf1	87	49.742	ENSHGLG00100015045	ESF1	67	49.915	Heterocephalus_glaber_male
ENSEBUG00000015161	esf1	76	74.627	ENSIPUG00000006507	esf1	85	70.833	Ictalurus_punctatus
ENSEBUG00000015161	esf1	99	44.960	ENSSTOG00000009846	ESF1	66	51.286	Ictidomys_tridecemlineatus
ENSEBUG00000015161	esf1	99	44.495	ENSJJAG00000012570	Esf1	66	50.341	Jaculus_jaculus
ENSEBUG00000015161	esf1	87	50.853	ENSLACG00000016439	ESF1	66	51.020	Latimeria_chalumnae
ENSEBUG00000015161	esf1	87	49.251	ENSLOCG00000015979	esf1	73	51.155	Lepisosteus_oculatus
ENSEBUG00000015161	esf1	99	43.815	ENSLAFG00000005479	ESF1	70	49.662	Loxodonta_africana
ENSEBUG00000015161	esf1	87	49.743	ENSMFAG00000036841	ESF1	65	50.256	Macaca_fascicularis
ENSEBUG00000015161	esf1	87	49.743	ENSMNEG00000044042	ESF1	99	43.964	Macaca_nemestrina
ENSEBUG00000015161	esf1	87	49.743	ENSMLEG00000037121	ESF1	65	50.256	Mandrillus_leucophaeus
ENSEBUG00000015161	esf1	78	75.385	ENSMAMG00000018648	esf1	90	66.667	Mastacembelus_armatus
ENSEBUG00000015161	esf1	78	46.286	ENSMZEG00005013912	esf1	99	46.667	Maylandia_zebra
ENSEBUG00000015161	esf1	99	43.184	ENSMGAG00000004291	ESF1	66	49.659	Meleagris_gallopavo
ENSEBUG00000015161	esf1	99	43.184	ENSMAUG00000015975	Esf1	99	44.725	Mesocricetus_auratus
ENSEBUG00000015161	esf1	87	49.742	ENSMICG00000010711	ESF1	65	49.914	Microcebus_murinus
ENSEBUG00000015161	esf1	99	44.032	ENSMOCG00000005902	Esf1	99	43.771	Microtus_ochrogaster
ENSEBUG00000015161	esf1	78	44.879	ENSMMOG00000018693	esf1	99	45.794	Mola_mola
ENSEBUG00000015161	esf1	99	45.082	ENSMODG00000005066	ESF1	68	50.429	Monodelphis_domestica
ENSEBUG00000015161	esf1	71	73.846	ENSMALG00000007338	esf1	79	70.270	Monopterus_albus
ENSEBUG00000015161	esf1	99	43.922	MGP_CAROLIEiJ_G0024365	Esf1	99	43.715	Mus_caroli
ENSEBUG00000015161	esf1	87	50.085	ENSMUSG00000045624	Esf1	99	43.842	Mus_musculus
ENSEBUG00000015161	esf1	87	49.659	MGP_PahariEiJ_G0025810	Esf1	66	48.993	Mus_pahari
ENSEBUG00000015161	esf1	87	50.000	MGP_SPRETEiJ_G0025285	Esf1	98	47.403	Mus_spretus
ENSEBUG00000015161	esf1	87	50.172	ENSMPUG00000001450	ESF1	65	50.687	Mustela_putorius_furo
ENSEBUG00000015161	esf1	99	44.246	ENSMLUG00000013080	ESF1	66	50.256	Myotis_lucifugus
ENSEBUG00000015161	esf1	87	48.448	ENSNLEG00000014563	ESF1	64	48.801	Nomascus_leucogenys
ENSEBUG00000015161	esf1	80	46.082	ENSOPRG00000004862	ESF1	100	47.191	Ochotona_princeps
ENSEBUG00000015161	esf1	99	44.457	ENSODEG00000006824	ESF1	99	44.354	Octodon_degus
ENSEBUG00000015161	esf1	80	73.134	ENSONIG00000006804	esf1	87	68.493	Oreochromis_niloticus
ENSEBUG00000015161	esf1	87	48.630	ENSOANG00000008432	-	99	42.745	Ornithorhynchus_anatinus
ENSEBUG00000015161	esf1	87	48.625	ENSOCUG00000005414	ESF1	67	49.317	Oryctolagus_cuniculus
ENSEBUG00000015161	esf1	78	43.297	ENSORLG00000018625	esf1	99	43.169	Oryzias_latipes
ENSEBUG00000015161	esf1	77	62.319	ENSORLG00015022826	esf1	91	59.459	Oryzias_latipes_hsok
ENSEBUG00000015161	esf1	78	45.522	ENSOMEG00000009311	esf1	99	45.772	Oryzias_melastigma
ENSEBUG00000015161	esf1	87	48.969	ENSOGAG00000016912	ESF1	67	49.742	Otolemur_garnettii
ENSEBUG00000015161	esf1	87	49.138	ENSOARG00000011158	ESF1	68	48.154	Ovis_aries
ENSEBUG00000015161	esf1	87	49.141	ENSPPAG00000024379	ESF1	66	49.744	Pan_paniscus
ENSEBUG00000015161	esf1	87	50.000	ENSPPRG00000012007	ESF1	65	50.767	Panthera_pardus
ENSEBUG00000015161	esf1	87	50.171	ENSPTIG00000020063	ESF1	65	50.937	Panthera_tigris_altaica
ENSEBUG00000015161	esf1	87	48.881	ENSPTRG00000013258	ESF1	65	49.573	Pan_troglodytes
ENSEBUG00000015161	esf1	77	69.863	ENSPKIG00000024448	esf1	78	69.863	Paramormyrops_kingsleyae
ENSEBUG00000015161	esf1	92	42.720	ENSPMGG00000016911	esf1	73	44.143	Periophthalmus_magnuspinnatus
ENSEBUG00000015161	esf1	99	42.761	ENSPCIG00000019331	ESF1	68	51.286	Phascolarctos_cinereus
ENSEBUG00000015161	esf1	79	58.209	ENSPFOG00000010101	esf1	88	58.209	Poecilia_formosa
ENSEBUG00000015161	esf1	78	45.386	ENSPLAG00000006452	esf1	99	45.234	Poecilia_latipinna
ENSEBUG00000015161	esf1	77	59.701	ENSPMEG00000000713	esf1	90	55.556	Poecilia_mexicana
ENSEBUG00000015161	esf1	80	61.538	ENSPREG00000004431	esf1	88	56.250	Poecilia_reticulata
ENSEBUG00000015161	esf1	87	49.310	ENSPPYG00000010715	ESF1	65	49.829	Pongo_abelii
ENSEBUG00000015161	esf1	72	44.255	ENSPCAG00000006881	ESF1	66	47.440	Procavia_capensis
ENSEBUG00000015161	esf1	78	59.504	ENSPVAG00000001295	ESF1	68	62.500	Pteropus_vampyrus
ENSEBUG00000015161	esf1	84	71.642	ENSPNYG00000015735	esf1	88	68.056	Pundamilia_nyererei
ENSEBUG00000015161	esf1	77	65.217	ENSPNAG00000014721	esf1	85	62.821	Pygocentrus_nattereri
ENSEBUG00000015161	esf1	87	50.000	ENSRNOG00000004777	Esf1	66	49.076	Rattus_norvegicus
ENSEBUG00000015161	esf1	87	49.570	ENSRBIG00000035763	ESF1	65	50.256	Rhinopithecus_bieti
ENSEBUG00000015161	esf1	87	49.570	ENSRROG00000032022	ESF1	65	50.256	Rhinopithecus_roxellana
ENSEBUG00000015161	esf1	71	33.199	YDR365C	-	74	32.638	Saccharomyces_cerevisiae
ENSEBUG00000015161	esf1	87	49.744	ENSSBOG00000030387	ESF1	65	50.085	Saimiri_boliviensis_boliviensis
ENSEBUG00000015161	esf1	99	44.728	ENSSHAG00000000449	ESF1	70	50.505	Sarcophilus_harrisii
ENSEBUG00000015161	esf1	76	73.846	ENSSDUG00000019460	esf1	99	71.233	Seriola_dumerili
ENSEBUG00000015161	esf1	92	46.299	ENSSPUG00000012635	ESF1	70	49.073	Sphenodon_punctatus
ENSEBUG00000015161	esf1	79	71.642	ENSSPAG00000019077	esf1	91	53.846	Stegastes_partitus
ENSEBUG00000015161	esf1	87	48.797	ENSSSCG00000007077	ESF1	65	49.317	Sus_scrofa
ENSEBUG00000015161	esf1	87	48.709	ENSTGUG00000002450	ESF1	64	49.398	Taeniopygia_guttata
ENSEBUG00000015161	esf1	80	73.134	ENSTRUG00000009445	esf1	88	68.493	Takifugu_rubripes
ENSEBUG00000015161	esf1	67	51.590	ENSTBEG00000008552	ESF1	61	51.943	Tupaia_belangeri
ENSEBUG00000015161	esf1	87	48.635	ENSTTRG00000005335	ESF1	65	49.233	Tursiops_truncatus
ENSEBUG00000015161	esf1	87	49.828	ENSUMAG00000008579	ESF1	65	50.342	Ursus_maritimus
ENSEBUG00000015161	esf1	76	58.964	ENSVPAG00000005291	ESF1	58	58.730	Vicugna_pacos
ENSEBUG00000015161	esf1	87	49.488	ENSVVUG00000014318	ESF1	61	49.747	Vulpes_vulpes
ENSEBUG00000015161	esf1	87	49.493	ENSXETG00000008079	esf1	70	49.832	Xenopus_tropicalis
ENSEBUG00000015161	esf1	77	63.077	ENSXMAG00000017651	esf1	92	47.423	Xiphophorus_maculatus