EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015164 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 926 bases
Position: chrFYBX02009656.1:836007-836932
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024581	RRM_1	PF00076.22	9.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025157	-	489	-	ENSEBUP00000024581	162 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015164	rbm38	59	38.158	ENSEBUG00000010003	-	80	38.158
ENSEBUG00000015164	rbm38	53	37.838	ENSEBUG00000007449	HNRNPAB	57	37.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015164	rbm38	66	84.112	ENSG00000132819	RBM38	88	84.112	Homo_sapiens
ENSEBUG00000015164	rbm38	62	83.333	ENSACIG00000012502	-	85	84.848	Amphilophus_citrinellus
ENSEBUG00000015164	rbm38	88	61.644	ENSACIG00000000010	rbm38	56	61.644	Amphilophus_citrinellus
ENSEBUG00000015164	rbm38	83	68.613	ENSANAG00000031959	RBM38	88	85.047	Aotus_nancymaae
ENSEBUG00000015164	rbm38	88	66.216	ENSBTAG00000008105	RBM38	61	66.216	Bos_taurus
ENSEBUG00000015164	rbm38	54	80.682	WBGene00006321	sup-12	58	80.682	Caenorhabditis_elegans
ENSEBUG00000015164	rbm38	66	85.047	ENSCJAG00000019139	RBM38	88	85.047	Callithrix_jacchus
ENSEBUG00000015164	rbm38	88	67.123	ENSCAFG00020021943	RBM38	61	67.123	Canis_lupus_dingo
ENSEBUG00000015164	rbm38	88	65.772	ENSCHIG00000002609	RBM38	61	65.772	Capra_hircus
ENSEBUG00000015164	rbm38	88	67.808	ENSCPOG00000012781	RBM38	61	67.808	Cavia_porcellus
ENSEBUG00000015164	rbm38	66	85.047	ENSCCAG00000036872	RBM38	88	85.047	Cebus_capucinus
ENSEBUG00000015164	rbm38	66	85.047	ENSCATG00000032133	RBM38	88	85.047	Cercocebus_atys
ENSEBUG00000015164	rbm38	88	67.808	ENSCLAG00000005906	RBM38	63	67.808	Chinchilla_lanigera
ENSEBUG00000015164	rbm38	83	67.883	ENSDNOG00000032004	RBM38	66	67.883	Dasypus_novemcinctus
ENSEBUG00000015164	rbm38	86	67.133	ENSEEUG00000013489	RBM38	60	67.133	Erinaceus_europaeus
ENSEBUG00000015164	rbm38	88	66.438	ENSFCAG00000042916	RBM38	88	83.178	Felis_catus
ENSEBUG00000015164	rbm38	60	89.796	ENSFALG00000010805	RBM38	61	79.487	Ficedula_albicollis
ENSEBUG00000015164	rbm38	60	83.838	ENSGMOG00000016655	-	53	83.838	Gadus_morhua
ENSEBUG00000015164	rbm38	66	85.047	ENSMFAG00000043808	RBM38	88	85.047	Macaca_fascicularis
ENSEBUG00000015164	rbm38	66	85.047	ENSMMUG00000031391	RBM38	88	85.047	Macaca_mulatta
ENSEBUG00000015164	rbm38	66	85.047	ENSMNEG00000034683	RBM38	88	85.047	Macaca_nemestrina
ENSEBUG00000015164	rbm38	70	61.947	ENSMLEG00000043261	-	87	61.947	Mandrillus_leucophaeus
ENSEBUG00000015164	rbm38	83	68.613	ENSMICG00000038011	RBM38	63	68.613	Microcebus_murinus
ENSEBUG00000015164	rbm38	67	78.571	ENSMMOG00000020051	-	50	78.571	Mola_mola
ENSEBUG00000015164	rbm38	68	81.818	MGP_CAROLIEiJ_G0024745	Rbm38	78	78.689	Mus_caroli
ENSEBUG00000015164	rbm38	68	81.818	ENSMUSG00000027510	Rbm38	78	78.689	Mus_musculus
ENSEBUG00000015164	rbm38	68	81.818	MGP_PahariEiJ_G0026186	Rbm38	78	78.689	Mus_pahari
ENSEBUG00000015164	rbm38	68	81.818	MGP_SPRETEiJ_G0025665	Rbm38	78	78.689	Mus_spretus
ENSEBUG00000015164	rbm38	83	67.883	ENSMPUG00000006518	RBM38	68	67.883	Mustela_putorius_furo
ENSEBUG00000015164	rbm38	83	67.153	ENSMLUG00000011140	RBM38	63	67.153	Myotis_lucifugus
ENSEBUG00000015164	rbm38	62	79.412	ENSMEUG00000005475	-	76	79.412	Notamacropus_eugenii
ENSEBUG00000015164	rbm38	88	67.808	ENSODEG00000007980	RBM38	61	67.808	Octodon_degus
ENSEBUG00000015164	rbm38	88	67.347	ENSOGAG00000029136	RBM38	61	67.347	Otolemur_garnettii
ENSEBUG00000015164	rbm38	88	66.438	ENSPPRG00000009507	RBM38	88	83.178	Panthera_pardus
ENSEBUG00000015164	rbm38	75	73.387	ENSPTRG00000045845	-	68	73.387	Pan_troglodytes
ENSEBUG00000015164	rbm38	85	68.085	ENSPTRG00000013661	RBM38	88	84.112	Pan_troglodytes
ENSEBUG00000015164	rbm38	66	85.047	ENSPANG00000020919	-	88	85.047	Papio_anubis
ENSEBUG00000015164	rbm38	59	86.316	ENSPKIG00000018122	-	79	87.097	Paramormyrops_kingsleyae
ENSEBUG00000015164	rbm38	66	84.259	ENSPCOG00000026201	RBM38	89	84.259	Propithecus_coquereli
ENSEBUG00000015164	rbm38	62	82.353	ENSPNYG00000019727	-	85	83.838	Pundamilia_nyererei
ENSEBUG00000015164	rbm38	62	82.353	ENSPNAG00000015123	-	74	85.263	Pygocentrus_nattereri
ENSEBUG00000015164	rbm38	68	74.545	ENSRROG00000036388	-	83	59.494	Rhinopithecus_roxellana
ENSEBUG00000015164	rbm38	66	85.047	ENSSBOG00000031053	RBM38	100	85.047	Saimiri_boliviensis_boliviensis
ENSEBUG00000015164	rbm38	88	67.123	ENSSSCG00000007504	RBM38	61	67.123	Sus_scrofa
ENSEBUG00000015164	rbm38	88	67.123	ENSUAMG00000019780	RBM38	61	67.123	Ursus_americanus
ENSEBUG00000015164	rbm38	88	67.123	ENSVVUG00000017246	RBM38	61	67.123	Vulpes_vulpes