EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015229 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 141839 bases
Position: chrFYBX02009633.1:36899-178737
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024671	PRP4	PF08799.11	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025247	-	3483	-	ENSEBUP00000024671	499 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015229	prpf4	50	30.220	ENSEBUG00000008013	poc1a	79	30.220
ENSEBUG00000015229	prpf4	52	30.556	ENSEBUG00000004448	wdr5	89	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015229	prpf4	86	73.733	ENSG00000136875	PRPF4	95	73.272	Homo_sapiens
ENSEBUG00000015229	prpf4	88	68.610	ENSAPOG00000014132	prpf4	98	67.937	Acanthochromis_polyacanthus
ENSEBUG00000015229	prpf4	86	73.502	ENSAMEG00000013048	PRPF4	93	73.041	Ailuropoda_melanoleuca
ENSEBUG00000015229	prpf4	88	69.663	ENSACIG00000005579	prpf4	99	68.989	Amphilophus_citrinellus
ENSEBUG00000015229	prpf4	88	68.315	ENSAOCG00000005457	prpf4	99	67.640	Amphiprion_ocellaris
ENSEBUG00000015229	prpf4	88	68.090	ENSAPEG00000000776	prpf4	99	67.416	Amphiprion_percula
ENSEBUG00000015229	prpf4	88	68.989	ENSATEG00000023013	prpf4	99	68.315	Anabas_testudineus
ENSEBUG00000015229	prpf4	88	72.851	ENSAPLG00000006534	PRPF4	94	72.172	Anas_platyrhynchos
ENSEBUG00000015229	prpf4	88	72.809	ENSACAG00000015110	PRPF4	97	72.360	Anolis_carolinensis
ENSEBUG00000015229	prpf4	86	73.502	ENSANAG00000022464	PRPF4	92	73.041	Aotus_nancymaae
ENSEBUG00000015229	prpf4	88	68.989	ENSACLG00000019031	prpf4	99	68.315	Astatotilapia_calliptera
ENSEBUG00000015229	prpf4	84	59.441	ENSAMXG00000006756	prpf4	99	62.162	Astyanax_mexicanus
ENSEBUG00000015229	prpf4	86	73.502	ENSBTAG00000004571	PRPF4	95	73.041	Bos_taurus
ENSEBUG00000015229	prpf4	87	43.478	WBGene00007972	prp-4	99	43.478	Caenorhabditis_elegans
ENSEBUG00000015229	prpf4	86	73.502	ENSCJAG00000017856	PRPF4	95	73.041	Callithrix_jacchus
ENSEBUG00000015229	prpf4	86	73.502	ENSCAFG00000003224	PRPF4	93	73.041	Canis_familiaris
ENSEBUG00000015229	prpf4	86	73.502	ENSCAFG00020022637	PRPF4	96	73.041	Canis_lupus_dingo
ENSEBUG00000015229	prpf4	86	73.502	ENSCHIG00000024648	-	95	73.041	Capra_hircus
ENSEBUG00000015229	prpf4	86	73.502	ENSTSYG00000010366	PRPF4	95	73.041	Carlito_syrichta
ENSEBUG00000015229	prpf4	78	71.649	ENSCAPG00000008935	PRPF4	90	71.134	Cavia_aperea
ENSEBUG00000015229	prpf4	86	73.041	ENSCPOG00000010747	-	95	72.581	Cavia_porcellus
ENSEBUG00000015229	prpf4	86	70.737	ENSCPOG00000014729	-	85	70.276	Cavia_porcellus
ENSEBUG00000015229	prpf4	86	73.733	ENSCCAG00000028990	PRPF4	95	73.272	Cebus_capucinus
ENSEBUG00000015229	prpf4	86	73.502	ENSCATG00000021552	PRPF4	95	73.041	Cercocebus_atys
ENSEBUG00000015229	prpf4	86	73.272	ENSCLAG00000013448	PRPF4	95	72.811	Chinchilla_lanigera
ENSEBUG00000015229	prpf4	78	74.485	ENSCHOG00000007233	PRPF4	99	73.969	Choloepus_hoffmanni
ENSEBUG00000015229	prpf4	89	72.483	ENSCPBG00000019136	PRPF4	73	72.072	Chrysemys_picta_bellii
ENSEBUG00000015229	prpf4	86	60.233	ENSCING00000001299	-	95	60.233	Ciona_intestinalis
ENSEBUG00000015229	prpf4	89	59.101	ENSCSAVG00000009178	-	99	60.401	Ciona_savignyi
ENSEBUG00000015229	prpf4	86	73.502	ENSCANG00000003246	PRPF4	95	73.041	Colobus_angolensis_palliatus
ENSEBUG00000015229	prpf4	86	73.502	ENSCGRG00001016992	Prpf4	95	73.041	Cricetulus_griseus_chok1gshd
ENSEBUG00000015229	prpf4	86	73.502	ENSCGRG00000017560	Prpf4	95	73.041	Cricetulus_griseus_crigri
ENSEBUG00000015229	prpf4	88	67.800	ENSCSEG00000020451	prpf4	99	67.347	Cynoglossus_semilaevis
ENSEBUG00000015229	prpf4	88	69.820	ENSDARG00000067639	prpf4	99	69.369	Danio_rerio
ENSEBUG00000015229	prpf4	86	73.502	ENSDNOG00000013203	PRPF4	95	73.041	Dasypus_novemcinctus
ENSEBUG00000015229	prpf4	86	73.272	ENSDORG00000026275	Prpf4	95	72.811	Dipodomys_ordii
ENSEBUG00000015229	prpf4	89	49.796	FBgn0036733	U4-U6-60K	99	50.407	Drosophila_melanogaster
ENSEBUG00000015229	prpf4	86	73.733	ENSETEG00000020389	PRPF4	95	73.272	Echinops_telfairi
ENSEBUG00000015229	prpf4	86	73.502	ENSEASG00005022678	PRPF4	95	73.041	Equus_asinus_asinus
ENSEBUG00000015229	prpf4	90	72.284	ENSECAG00000007072	PRPF4	95	73.041	Equus_caballus
ENSEBUG00000015229	prpf4	71	79.498	ENSEEUG00000007480	PRPF4	79	79.498	Erinaceus_europaeus
ENSEBUG00000015229	prpf4	88	69.526	ENSELUG00000007510	prpf4	99	69.300	Esox_lucius
ENSEBUG00000015229	prpf4	86	73.502	ENSFCAG00000005514	PRPF4	95	73.041	Felis_catus
ENSEBUG00000015229	prpf4	87	73.227	ENSFALG00000005423	PRPF4	84	72.540	Ficedula_albicollis
ENSEBUG00000015229	prpf4	86	73.733	ENSFDAG00000005839	PRPF4	95	73.272	Fukomys_damarensis
ENSEBUG00000015229	prpf4	88	69.213	ENSFHEG00000001300	prpf4	99	68.539	Fundulus_heteroclitus
ENSEBUG00000015229	prpf4	88	72.624	ENSGALG00000008857	PRPF4	94	71.946	Gallus_gallus
ENSEBUG00000015229	prpf4	65	66.159	ENSGAFG00000012164	prpf4	67	65.244	Gambusia_affinis
ENSEBUG00000015229	prpf4	88	63.039	ENSGACG00000015476	prpf4	99	63.039	Gasterosteus_aculeatus
ENSEBUG00000015229	prpf4	88	72.523	ENSGAGG00000025029	PRPF4	94	72.072	Gopherus_agassizii
ENSEBUG00000015229	prpf4	86	73.733	ENSGGOG00000006943	PRPF4	95	73.272	Gorilla_gorilla
ENSEBUG00000015229	prpf4	88	68.989	ENSHBUG00000000562	prpf4	99	68.315	Haplochromis_burtoni
ENSEBUG00000015229	prpf4	86	58.525	ENSHGLG00000003838	-	81	58.065	Heterocephalus_glaber_female
ENSEBUG00000015229	prpf4	86	73.272	ENSHGLG00000015191	PRPF4	95	72.811	Heterocephalus_glaber_female
ENSEBUG00000015229	prpf4	83	64.748	ENSHGLG00000016628	-	85	64.748	Heterocephalus_glaber_female
ENSEBUG00000015229	prpf4	86	58.525	ENSHGLG00100005571	-	81	58.065	Heterocephalus_glaber_male
ENSEBUG00000015229	prpf4	88	68.018	ENSIPUG00000017956	PRPF4	99	67.117	Ictalurus_punctatus
ENSEBUG00000015229	prpf4	86	73.502	ENSSTOG00000027833	PRPF4	95	73.041	Ictidomys_tridecemlineatus
ENSEBUG00000015229	prpf4	86	73.502	ENSJJAG00000008838	Prpf4	95	73.041	Jaculus_jaculus
ENSEBUG00000015229	prpf4	88	69.283	ENSKMAG00000013236	prpf4	99	68.834	Kryptolebias_marmoratus
ENSEBUG00000015229	prpf4	88	68.849	ENSLBEG00000020611	prpf4	99	68.172	Labrus_bergylta
ENSEBUG00000015229	prpf4	88	68.610	ENSLACG00000016317	PRPF4	97	68.161	Latimeria_chalumnae
ENSEBUG00000015229	prpf4	88	70.495	ENSLOCG00000000581	prpf4	99	70.270	Lepisosteus_oculatus
ENSEBUG00000015229	prpf4	86	73.502	ENSLAFG00000018225	PRPF4	95	73.041	Loxodonta_africana
ENSEBUG00000015229	prpf4	86	73.272	ENSMFAG00000039397	PRPF4	95	72.811	Macaca_fascicularis
ENSEBUG00000015229	prpf4	86	73.502	ENSMMUG00000005844	PRPF4	95	73.041	Macaca_mulatta
ENSEBUG00000015229	prpf4	86	63.158	ENSMNEG00000033737	PRPF4	95	62.700	Macaca_nemestrina
ENSEBUG00000015229	prpf4	86	73.502	ENSMLEG00000040284	PRPF4	95	73.041	Mandrillus_leucophaeus
ENSEBUG00000015229	prpf4	96	64.213	ENSMAMG00000020141	prpf4	99	67.640	Mastacembelus_armatus
ENSEBUG00000015229	prpf4	88	68.989	ENSMZEG00005023205	prpf4	99	68.315	Maylandia_zebra
ENSEBUG00000015229	prpf4	87	73.333	ENSMGAG00000001796	PRPF4	94	71.719	Meleagris_gallopavo
ENSEBUG00000015229	prpf4	86	73.502	ENSMAUG00000018022	Prpf4	95	73.041	Mesocricetus_auratus
ENSEBUG00000015229	prpf4	86	73.733	ENSMICG00000015022	PRPF4	95	73.272	Microcebus_murinus
ENSEBUG00000015229	prpf4	86	73.733	ENSMOCG00000018273	Prpf4	95	73.272	Microtus_ochrogaster
ENSEBUG00000015229	prpf4	88	68.027	ENSMMOG00000021177	prpf4	99	67.574	Mola_mola
ENSEBUG00000015229	prpf4	88	71.946	ENSMODG00000004444	-	97	71.493	Monodelphis_domestica
ENSEBUG00000015229	prpf4	88	72.172	ENSMODG00000025096	-	94	71.719	Monodelphis_domestica
ENSEBUG00000015229	prpf4	88	69.213	ENSMALG00000013624	prpf4	99	68.539	Monopterus_albus
ENSEBUG00000015229	prpf4	86	73.502	MGP_CAROLIEiJ_G0026078	Prpf4	95	73.041	Mus_caroli
ENSEBUG00000015229	prpf4	86	73.502	ENSMUSG00000066148	Prpf4	95	73.041	Mus_musculus
ENSEBUG00000015229	prpf4	86	73.733	MGP_PahariEiJ_G0028413	Prpf4	95	73.272	Mus_pahari
ENSEBUG00000015229	prpf4	86	73.502	MGP_SPRETEiJ_G0027042	Prpf4	95	73.041	Mus_spretus
ENSEBUG00000015229	prpf4	86	73.502	ENSMPUG00000007883	PRPF4	95	73.041	Mustela_putorius_furo
ENSEBUG00000015229	prpf4	86	73.502	ENSMLUG00000015309	-	93	73.041	Myotis_lucifugus
ENSEBUG00000015229	prpf4	86	72.581	ENSMLUG00000008626	-	93	72.120	Myotis_lucifugus
ENSEBUG00000015229	prpf4	86	67.512	ENSNGAG00000000468	Prpf4	95	67.051	Nannospalax_galili
ENSEBUG00000015229	prpf4	88	69.213	ENSNBRG00000007972	prpf4	99	68.539	Neolamprologus_brichardi
ENSEBUG00000015229	prpf4	86	73.502	ENSNLEG00000016647	PRPF4	95	73.041	Nomascus_leucogenys
ENSEBUG00000015229	prpf4	88	71.946	ENSMEUG00000013256	PRPF4	98	71.493	Notamacropus_eugenii
ENSEBUG00000015229	prpf4	86	73.272	ENSOPRG00000005302	PRPF4	95	72.811	Ochotona_princeps
ENSEBUG00000015229	prpf4	86	73.502	ENSODEG00000018147	PRPF4	95	73.041	Octodon_degus
ENSEBUG00000015229	prpf4	88	68.764	ENSONIG00000012671	prpf4	99	68.090	Oreochromis_niloticus
ENSEBUG00000015229	prpf4	86	73.502	ENSOCUG00000005046	PRPF4	95	73.041	Oryctolagus_cuniculus
ENSEBUG00000015229	prpf4	88	67.727	ENSORLG00000019641	prpf4	99	67.727	Oryzias_latipes
ENSEBUG00000015229	prpf4	88	67.727	ENSORLG00020019438	prpf4	99	67.727	Oryzias_latipes_hni
ENSEBUG00000015229	prpf4	88	68.182	ENSOMEG00000020941	prpf4	99	68.182	Oryzias_melastigma
ENSEBUG00000015229	prpf4	86	68.894	ENSOGAG00000007802	PRPF4	93	68.433	Otolemur_garnettii
ENSEBUG00000015229	prpf4	86	73.502	ENSOARG00000006319	PRPF4	92	73.041	Ovis_aries
ENSEBUG00000015229	prpf4	86	73.733	ENSPPAG00000041797	PRPF4	95	73.272	Pan_paniscus
ENSEBUG00000015229	prpf4	86	73.502	ENSPPRG00000014360	PRPF4	95	73.041	Panthera_pardus
ENSEBUG00000015229	prpf4	86	73.502	ENSPTIG00000009574	PRPF4	95	73.041	Panthera_tigris_altaica
ENSEBUG00000015229	prpf4	86	73.733	ENSPTRG00000021274	PRPF4	95	73.272	Pan_troglodytes
ENSEBUG00000015229	prpf4	86	73.502	ENSPANG00000025776	PRPF4	92	73.041	Papio_anubis
ENSEBUG00000015229	prpf4	88	70.880	ENSPKIG00000017259	prpf4	99	70.429	Paramormyrops_kingsleyae
ENSEBUG00000015229	prpf4	88	71.396	ENSPSIG00000010713	PRPF4	89	70.946	Pelodiscus_sinensis
ENSEBUG00000015229	prpf4	88	49.474	ENSPMGG00000000997	prpf4	97	49.474	Periophthalmus_magnuspinnatus
ENSEBUG00000015229	prpf4	86	73.502	ENSPEMG00000024115	Prpf4	95	73.041	Peromyscus_maniculatus_bairdii
ENSEBUG00000015229	prpf4	88	71.946	ENSPCIG00000003821	PRPF4	98	71.493	Phascolarctos_cinereus
ENSEBUG00000015229	prpf4	88	62.138	ENSPFOG00000013524	prpf4	99	64.634	Poecilia_formosa
ENSEBUG00000015229	prpf4	64	65.031	ENSPLAG00000011620	prpf4	99	62.805	Poecilia_latipinna
ENSEBUG00000015229	prpf4	67	66.568	ENSPMEG00000006813	prpf4	99	65.680	Poecilia_mexicana
ENSEBUG00000015229	prpf4	86	73.041	ENSPCAG00000002561	PRPF4	97	72.581	Procavia_capensis
ENSEBUG00000015229	prpf4	86	73.272	ENSPCOG00000011975	PRPF4	95	72.811	Propithecus_coquereli
ENSEBUG00000015229	prpf4	86	70.507	ENSPVAG00000004708	PRPF4	95	70.046	Pteropus_vampyrus
ENSEBUG00000015229	prpf4	88	68.989	ENSPNYG00000008013	prpf4	99	68.315	Pundamilia_nyererei
ENSEBUG00000015229	prpf4	88	69.820	ENSPNAG00000000697	prpf4	99	69.595	Pygocentrus_nattereri
ENSEBUG00000015229	prpf4	86	73.502	ENSRNOG00000014777	Prpf4	95	73.041	Rattus_norvegicus
ENSEBUG00000015229	prpf4	86	73.502	ENSRBIG00000040221	PRPF4	95	73.041	Rhinopithecus_bieti
ENSEBUG00000015229	prpf4	86	73.502	ENSRROG00000040240	PRPF4	95	73.041	Rhinopithecus_roxellana
ENSEBUG00000015229	prpf4	88	72.172	ENSSHAG00000017658	PRPF4	97	71.719	Sarcophilus_harrisii
ENSEBUG00000015229	prpf4	88	71.622	ENSSFOG00015008963	prpf4	99	71.171	Scleropages_formosus
ENSEBUG00000015229	prpf4	88	68.161	ENSSMAG00000008889	prpf4	99	67.489	Scophthalmus_maximus
ENSEBUG00000015229	prpf4	88	68.764	ENSSDUG00000022083	prpf4	94	68.315	Seriola_dumerili
ENSEBUG00000015229	prpf4	88	68.764	ENSSLDG00000008115	prpf4	86	68.315	Seriola_lalandi_dorsalis
ENSEBUG00000015229	prpf4	88	72.398	ENSSPUG00000015582	PRPF4	97	71.946	Sphenodon_punctatus
ENSEBUG00000015229	prpf4	88	62.946	ENSSPAG00000011286	prpf4	99	62.946	Stegastes_partitus
ENSEBUG00000015229	prpf4	86	73.502	ENSSSCG00000024648	PRPF4	95	73.041	Sus_scrofa
ENSEBUG00000015229	prpf4	87	73.121	ENSTGUG00000002623	PRPF4	100	73.239	Taeniopygia_guttata
ENSEBUG00000015229	prpf4	88	70.495	ENSTRUG00000008853	prpf4	99	69.595	Takifugu_rubripes
ENSEBUG00000015229	prpf4	88	69.161	ENSTNIG00000013250	prpf4	99	68.481	Tetraodon_nigroviridis
ENSEBUG00000015229	prpf4	86	67.051	ENSTBEG00000000821	PRPF4	95	66.590	Tupaia_belangeri
ENSEBUG00000015229	prpf4	74	74.832	ENSTTRG00000003246	PRPF4	66	74.161	Tursiops_truncatus
ENSEBUG00000015229	prpf4	62	68.167	ENSUAMG00000018288	PRPF4	88	67.857	Ursus_americanus
ENSEBUG00000015229	prpf4	86	72.811	ENSUMAG00000019375	PRPF4	95	72.350	Ursus_maritimus
ENSEBUG00000015229	prpf4	87	73.227	ENSVPAG00000005281	PRPF4	96	72.769	Vicugna_pacos
ENSEBUG00000015229	prpf4	86	72.374	ENSVVUG00000002476	PRPF4	99	71.918	Vulpes_vulpes
ENSEBUG00000015229	prpf4	64	53.239	ENSXCOG00000006101	prpf4	92	52.394	Xiphophorus_couchianus
ENSEBUG00000015229	prpf4	84	57.826	ENSXMAG00000002750	prpf4	99	57.174	Xiphophorus_maculatus