EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015411 (Gene tree)
Gene ID: -
Gene Symbol: sf3a3
Alias: -
Full Name: splicing factor 3a%2C subunit 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 95484 bases
Position: chrFYBX02010291.1:1063483-1158966
Accession: ZDB-GENE-040908-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024975	SF3a60_bindingd	PF12108.8	1.5e-14	1	1
ENSEBUP00000024957	SF3a60_bindingd	PF12108.8	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025533	-	5374	-	ENSEBUP00000024957	568 (aa)	-	-
ENSEBUT00000025551	-	2885	-	ENSEBUP00000024975	547 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015411	sf3a3	92	81.312	ENSG00000183431	SF3A3	100	80.716	Homo_sapiens
ENSEBUG00000015411	sf3a3	92	79.722	ENSAPOG00000015608	sf3a3	100	79.324	Acanthochromis_polyacanthus
ENSEBUG00000015411	sf3a3	92	81.312	ENSAMEG00000001262	SF3A3	100	80.716	Ailuropoda_melanoleuca
ENSEBUG00000015411	sf3a3	87	74.067	ENSACIG00000009061	sf3a3	99	74.118	Amphilophus_citrinellus
ENSEBUG00000015411	sf3a3	92	79.920	ENSAOCG00000013954	sf3a3	100	79.523	Amphiprion_ocellaris
ENSEBUG00000015411	sf3a3	92	79.920	ENSAPEG00000007297	sf3a3	100	79.523	Amphiprion_percula
ENSEBUG00000015411	sf3a3	92	79.324	ENSATEG00000008754	sf3a3	100	78.926	Anabas_testudineus
ENSEBUG00000015411	sf3a3	86	81.104	ENSAPLG00000014900	SF3A3	100	80.467	Anas_platyrhynchos
ENSEBUG00000015411	sf3a3	92	80.517	ENSACAG00000017058	SF3A3	100	79.920	Anolis_carolinensis
ENSEBUG00000015411	sf3a3	92	63.817	ENSANAG00000036903	-	100	61.829	Aotus_nancymaae
ENSEBUG00000015411	sf3a3	91	78.600	ENSANAG00000014878	SF3A3	100	78.000	Aotus_nancymaae
ENSEBUG00000015411	sf3a3	92	79.523	ENSACLG00000017977	sf3a3	100	79.125	Astatotilapia_calliptera
ENSEBUG00000015411	sf3a3	98	74.128	ENSAMXG00000016855	sf3a3	94	73.761	Astyanax_mexicanus
ENSEBUG00000015411	sf3a3	92	81.113	ENSBTAG00000007299	SF3A3	100	80.716	Bos_taurus
ENSEBUG00000015411	sf3a3	92	50.693	WBGene00011758	T13H5.4	100	50.495	Caenorhabditis_elegans
ENSEBUG00000015411	sf3a3	92	81.312	ENSCJAG00000002176	SF3A3	100	80.716	Callithrix_jacchus
ENSEBUG00000015411	sf3a3	92	81.312	ENSCAFG00000003222	-	100	80.716	Canis_familiaris
ENSEBUG00000015411	sf3a3	92	81.312	ENSCAFG00000000683	-	100	80.716	Canis_familiaris
ENSEBUG00000015411	sf3a3	92	81.312	ENSCAFG00020006186	SF3A3	100	80.716	Canis_lupus_dingo
ENSEBUG00000015411	sf3a3	92	81.113	ENSCHIG00000020638	SF3A3	100	80.716	Capra_hircus
ENSEBUG00000015411	sf3a3	92	75.746	ENSTSYG00000008417	SF3A3	100	75.746	Carlito_syrichta
ENSEBUG00000015411	sf3a3	78	51.598	ENSCAPG00000003466	SF3A3	100	49.431	Cavia_aperea
ENSEBUG00000015411	sf3a3	92	81.511	ENSCPOG00000008660	SF3A3	100	80.915	Cavia_porcellus
ENSEBUG00000015411	sf3a3	92	81.312	ENSCCAG00000033732	SF3A3	100	80.716	Cebus_capucinus
ENSEBUG00000015411	sf3a3	92	58.416	ENSCCAG00000034048	-	100	58.218	Cebus_capucinus
ENSEBUG00000015411	sf3a3	92	60.835	ENSCATG00000043537	-	100	61.431	Cercocebus_atys
ENSEBUG00000015411	sf3a3	86	67.660	ENSCATG00000041660	-	100	67.660	Cercocebus_atys
ENSEBUG00000015411	sf3a3	92	81.312	ENSCATG00000043496	SF3A3	100	80.716	Cercocebus_atys
ENSEBUG00000015411	sf3a3	92	81.113	ENSCLAG00000010838	SF3A3	100	80.716	Chinchilla_lanigera
ENSEBUG00000015411	sf3a3	87	80.962	ENSCSAG00000001120	SF3A3	100	80.335	Chlorocebus_sabaeus
ENSEBUG00000015411	sf3a3	62	80.198	ENSCHOG00000006849	SF3A3	68	80.198	Choloepus_hoffmanni
ENSEBUG00000015411	sf3a3	92	75.896	ENSCPBG00000018291	-	100	75.299	Chrysemys_picta_bellii
ENSEBUG00000015411	sf3a3	57	62.739	ENSCPBG00000007472	-	76	63.576	Chrysemys_picta_bellii
ENSEBUG00000015411	sf3a3	92	66.667	ENSCING00000002730	-	100	66.004	Ciona_intestinalis
ENSEBUG00000015411	sf3a3	92	67.197	ENSCSAVG00000005063	-	100	66.600	Ciona_savignyi
ENSEBUG00000015411	sf3a3	92	81.312	ENSCANG00000042083	SF3A3	100	80.716	Colobus_angolensis_palliatus
ENSEBUG00000015411	sf3a3	92	57.968	ENSCANG00000035535	-	100	58.566	Colobus_angolensis_palliatus
ENSEBUG00000015411	sf3a3	92	81.511	ENSCGRG00001011320	Sf3a3	100	80.915	Cricetulus_griseus_chok1gshd
ENSEBUG00000015411	sf3a3	92	81.511	ENSCGRG00000012156	Sf3a3	100	80.915	Cricetulus_griseus_crigri
ENSEBUG00000015411	sf3a3	92	78.926	ENSCSEG00000010401	sf3a3	100	78.529	Cynoglossus_semilaevis
ENSEBUG00000015411	sf3a3	86	77.919	ENSCVAG00000010239	sf3a3	95	77.495	Cyprinodon_variegatus
ENSEBUG00000015411	sf3a3	92	79.125	ENSDARG00000100114	sf3a3	100	79.810	Danio_rerio
ENSEBUG00000015411	sf3a3	84	80.828	ENSDNOG00000046628	SF3A3	99	80.828	Dasypus_novemcinctus
ENSEBUG00000015411	sf3a3	92	81.312	ENSDORG00000008798	Sf3a3	100	80.915	Dipodomys_ordii
ENSEBUG00000015411	sf3a3	92	65.347	FBgn0014366	noi	100	65.347	Drosophila_melanogaster
ENSEBUG00000015411	sf3a3	92	81.312	ENSEASG00005012906	SF3A3	100	80.716	Equus_asinus_asinus
ENSEBUG00000015411	sf3a3	92	81.312	ENSECAG00000017333	SF3A3	100	80.716	Equus_caballus
ENSEBUG00000015411	sf3a3	92	79.324	ENSELUG00000010024	sf3a3	100	78.728	Esox_lucius
ENSEBUG00000015411	sf3a3	92	81.312	ENSFCAG00000027772	SF3A3	100	80.716	Felis_catus
ENSEBUG00000015411	sf3a3	92	81.710	ENSFALG00000001003	SF3A3	100	81.113	Ficedula_albicollis
ENSEBUG00000015411	sf3a3	92	81.511	ENSFDAG00000020908	SF3A3	100	80.915	Fukomys_damarensis
ENSEBUG00000015411	sf3a3	92	78.728	ENSFHEG00000019107	sf3a3	100	78.330	Fundulus_heteroclitus
ENSEBUG00000015411	sf3a3	92	78.728	ENSGMOG00000015540	sf3a3	100	78.330	Gadus_morhua
ENSEBUG00000015411	sf3a3	92	81.113	ENSGALG00000001540	SF3A3	100	80.716	Gallus_gallus
ENSEBUG00000015411	sf3a3	92	78.728	ENSGAFG00000002320	sf3a3	100	78.330	Gambusia_affinis
ENSEBUG00000015411	sf3a3	92	79.324	ENSGACG00000007842	sf3a3	100	78.926	Gasterosteus_aculeatus
ENSEBUG00000015411	sf3a3	92	81.312	ENSGAGG00000014980	SF3A3	100	80.716	Gopherus_agassizii
ENSEBUG00000015411	sf3a3	92	81.312	ENSGGOG00000013928	SF3A3	100	80.716	Gorilla_gorilla
ENSEBUG00000015411	sf3a3	92	62.823	ENSGGOG00000022611	-	100	62.823	Gorilla_gorilla
ENSEBUG00000015411	sf3a3	92	79.523	ENSHBUG00000018158	sf3a3	100	79.125	Haplochromis_burtoni
ENSEBUG00000015411	sf3a3	92	81.511	ENSHGLG00000012502	SF3A3	100	80.915	Heterocephalus_glaber_female
ENSEBUG00000015411	sf3a3	92	81.511	ENSHGLG00100010546	SF3A3	100	80.915	Heterocephalus_glaber_male
ENSEBUG00000015411	sf3a3	92	78.131	ENSHCOG00000015109	sf3a3	100	77.734	Hippocampus_comes
ENSEBUG00000015411	sf3a3	92	78.926	ENSIPUG00000011603	sf3a3	100	78.529	Ictalurus_punctatus
ENSEBUG00000015411	sf3a3	92	81.312	ENSSTOG00000001691	SF3A3	100	80.716	Ictidomys_tridecemlineatus
ENSEBUG00000015411	sf3a3	92	81.710	ENSJJAG00000012404	Sf3a3	100	81.113	Jaculus_jaculus
ENSEBUG00000015411	sf3a3	92	78.529	ENSKMAG00000007632	sf3a3	100	78.131	Kryptolebias_marmoratus
ENSEBUG00000015411	sf3a3	92	73.757	ENSLBEG00000000816	sf3a3	100	73.360	Labrus_bergylta
ENSEBUG00000015411	sf3a3	92	80.318	ENSLOCG00000003273	sf3a3	100	79.722	Lepisosteus_oculatus
ENSEBUG00000015411	sf3a3	92	70.530	ENSLAFG00000008094	SF3A3	100	70.530	Loxodonta_africana
ENSEBUG00000015411	sf3a3	92	81.312	ENSMFAG00000043047	SF3A3	100	80.716	Macaca_fascicularis
ENSEBUG00000015411	sf3a3	86	66.170	ENSMFAG00000036706	-	100	66.596	Macaca_fascicularis
ENSEBUG00000015411	sf3a3	92	81.312	ENSMMUG00000023199	SF3A3	100	80.716	Macaca_mulatta
ENSEBUG00000015411	sf3a3	92	64.940	ENSMMUG00000038820	-	100	65.936	Macaca_mulatta
ENSEBUG00000015411	sf3a3	86	65.532	ENSMNEG00000028686	-	100	65.957	Macaca_nemestrina
ENSEBUG00000015411	sf3a3	92	81.312	ENSMNEG00000044291	SF3A3	100	80.716	Macaca_nemestrina
ENSEBUG00000015411	sf3a3	92	60.437	ENSMLEG00000028631	-	100	61.034	Mandrillus_leucophaeus
ENSEBUG00000015411	sf3a3	92	67.729	ENSMLEG00000036714	-	100	68.327	Mandrillus_leucophaeus
ENSEBUG00000015411	sf3a3	92	81.312	ENSMLEG00000030641	SF3A3	100	80.716	Mandrillus_leucophaeus
ENSEBUG00000015411	sf3a3	92	78.926	ENSMAMG00000001942	sf3a3	100	78.529	Mastacembelus_armatus
ENSEBUG00000015411	sf3a3	92	79.523	ENSMZEG00005016987	sf3a3	100	79.125	Maylandia_zebra
ENSEBUG00000015411	sf3a3	92	77.030	ENSMGAG00000002875	SF3A3	100	76.634	Meleagris_gallopavo
ENSEBUG00000015411	sf3a3	84	78.696	ENSMICG00000026541	-	100	78.043	Microcebus_murinus
ENSEBUG00000015411	sf3a3	92	75.746	ENSMICG00000043548	-	100	74.553	Microcebus_murinus
ENSEBUG00000015411	sf3a3	92	76.740	ENSMICG00000001485	-	100	76.143	Microcebus_murinus
ENSEBUG00000015411	sf3a3	87	78.059	ENSMOCG00000014565	-	97	77.426	Microtus_ochrogaster
ENSEBUG00000015411	sf3a3	92	78.685	ENSMOCG00000019939	-	100	78.088	Microtus_ochrogaster
ENSEBUG00000015411	sf3a3	92	79.324	ENSMMOG00000014307	sf3a3	100	78.926	Mola_mola
ENSEBUG00000015411	sf3a3	92	64.217	ENSMODG00000017729	-	100	63.532	Monodelphis_domestica
ENSEBUG00000015411	sf3a3	92	76.143	ENSMODG00000024045	-	100	75.547	Monodelphis_domestica
ENSEBUG00000015411	sf3a3	92	79.125	ENSMALG00000004836	sf3a3	100	78.821	Monopterus_albus
ENSEBUG00000015411	sf3a3	92	81.511	MGP_CAROLIEiJ_G0026449	Sf3a3	100	80.915	Mus_caroli
ENSEBUG00000015411	sf3a3	92	81.511	ENSMUSG00000028902	Sf3a3	100	80.915	Mus_musculus
ENSEBUG00000015411	sf3a3	92	78.088	MGP_PahariEiJ_G0028780	Sf3a3	100	77.490	Mus_pahari
ENSEBUG00000015411	sf3a3	92	81.511	MGP_SPRETEiJ_G0027428	Sf3a3	100	80.915	Mus_spretus
ENSEBUG00000015411	sf3a3	92	81.511	ENSMLUG00000000991	SF3A3	100	80.915	Myotis_lucifugus
ENSEBUG00000015411	sf3a3	92	77.291	ENSNGAG00000018032	Sf3a3	100	76.693	Nannospalax_galili
ENSEBUG00000015411	sf3a3	92	73.956	ENSNLEG00000011720	SF3A3	100	73.956	Nomascus_leucogenys
ENSEBUG00000015411	sf3a3	92	81.511	ENSOPRG00000012785	SF3A3	100	80.915	Ochotona_princeps
ENSEBUG00000015411	sf3a3	92	72.112	ENSODEG00000018393	-	100	72.112	Octodon_degus
ENSEBUG00000015411	sf3a3	92	78.330	ENSODEG00000006854	-	100	78.728	Octodon_degus
ENSEBUG00000015411	sf3a3	92	69.048	ENSODEG00000000937	-	100	69.643	Octodon_degus
ENSEBUG00000015411	sf3a3	92	77.888	ENSODEG00000007470	-	100	77.291	Octodon_degus
ENSEBUG00000015411	sf3a3	80	79.863	ENSONIG00000010296	sf3a3	100	79.405	Oreochromis_niloticus
ENSEBUG00000015411	sf3a3	86	81.316	ENSOANG00000002473	SF3A3	100	80.679	Ornithorhynchus_anatinus
ENSEBUG00000015411	sf3a3	92	81.511	ENSOCUG00000005407	SF3A3	100	80.915	Oryctolagus_cuniculus
ENSEBUG00000015411	sf3a3	92	77.734	ENSORLG00000008175	sf3a3	100	77.336	Oryzias_latipes
ENSEBUG00000015411	sf3a3	92	77.932	ENSORLG00020013708	sf3a3	100	77.535	Oryzias_latipes_hni
ENSEBUG00000015411	sf3a3	92	77.535	ENSORLG00015004104	sf3a3	100	77.137	Oryzias_latipes_hsok
ENSEBUG00000015411	sf3a3	92	78.330	ENSOMEG00000020177	sf3a3	100	77.932	Oryzias_melastigma
ENSEBUG00000015411	sf3a3	92	81.113	ENSOARG00000019950	SF3A3	100	80.716	Ovis_aries
ENSEBUG00000015411	sf3a3	92	81.312	ENSPPAG00000034066	SF3A3	100	80.716	Pan_paniscus
ENSEBUG00000015411	sf3a3	92	62.425	ENSPPAG00000039955	-	100	62.425	Pan_paniscus
ENSEBUG00000015411	sf3a3	92	81.312	ENSPPRG00000001258	SF3A3	100	80.716	Panthera_pardus
ENSEBUG00000015411	sf3a3	92	81.312	ENSPTIG00000007515	SF3A3	100	80.716	Panthera_tigris_altaica
ENSEBUG00000015411	sf3a3	92	81.312	ENSPTRG00000000559	SF3A3	100	80.716	Pan_troglodytes
ENSEBUG00000015411	sf3a3	92	63.419	ENSPTRG00000046013	-	100	63.618	Pan_troglodytes
ENSEBUG00000015411	sf3a3	79	75.294	ENSPANG00000031214	-	100	60.359	Papio_anubis
ENSEBUG00000015411	sf3a3	92	70.319	ENSPANG00000029393	-	100	70.916	Papio_anubis
ENSEBUG00000015411	sf3a3	92	81.312	ENSPANG00000021859	SF3A3	100	80.716	Papio_anubis
ENSEBUG00000015411	sf3a3	92	79.920	ENSPKIG00000004719	sf3a3	100	79.324	Paramormyrops_kingsleyae
ENSEBUG00000015411	sf3a3	92	79.208	ENSPSIG00000004273	SF3A3	100	78.614	Pelodiscus_sinensis
ENSEBUG00000015411	sf3a3	84	76.906	ENSPMGG00000003610	sf3a3	94	76.906	Periophthalmus_magnuspinnatus
ENSEBUG00000015411	sf3a3	92	81.511	ENSPEMG00000020805	Sf3a3	100	80.915	Peromyscus_maniculatus_bairdii
ENSEBUG00000015411	sf3a3	92	80.915	ENSPCIG00000025719	SF3A3	100	80.318	Phascolarctos_cinereus
ENSEBUG00000015411	sf3a3	92	78.728	ENSPFOG00000005284	sf3a3	100	78.330	Poecilia_formosa
ENSEBUG00000015411	sf3a3	91	76.152	ENSPLAG00000003979	sf3a3	92	75.752	Poecilia_latipinna
ENSEBUG00000015411	sf3a3	72	72.658	ENSPMEG00000021132	sf3a3	88	72.658	Poecilia_mexicana
ENSEBUG00000015411	sf3a3	92	78.728	ENSPREG00000013802	sf3a3	100	78.330	Poecilia_reticulata
ENSEBUG00000015411	sf3a3	92	79.125	ENSPPYG00000001519	SF3A3	100	78.529	Pongo_abelii
ENSEBUG00000015411	sf3a3	92	75.944	ENSPCAG00000010734	SF3A3	100	75.348	Procavia_capensis
ENSEBUG00000015411	sf3a3	92	73.413	ENSPCOG00000020389	-	100	72.817	Propithecus_coquereli
ENSEBUG00000015411	sf3a3	92	66.799	ENSPCOG00000017131	-	100	66.402	Propithecus_coquereli
ENSEBUG00000015411	sf3a3	81	86.772	ENSPVAG00000010158	SF3A3	88	86.772	Pteropus_vampyrus
ENSEBUG00000015411	sf3a3	92	79.523	ENSPNYG00000000786	sf3a3	100	79.125	Pundamilia_nyererei
ENSEBUG00000015411	sf3a3	92	78.529	ENSPNAG00000010298	sf3a3	100	78.131	Pygocentrus_nattereri
ENSEBUG00000015411	sf3a3	92	81.511	ENSRNOG00000007629	Sf3a3	100	80.915	Rattus_norvegicus
ENSEBUG00000015411	sf3a3	92	81.312	ENSRBIG00000043567	SF3A3	100	80.716	Rhinopithecus_bieti
ENSEBUG00000015411	sf3a3	92	60.159	ENSRBIG00000043833	-	100	60.159	Rhinopithecus_bieti
ENSEBUG00000015411	sf3a3	92	61.355	ENSRBIG00000041123	-	100	61.753	Rhinopithecus_bieti
ENSEBUG00000015411	sf3a3	92	81.312	ENSRROG00000033888	SF3A3	100	80.716	Rhinopithecus_roxellana
ENSEBUG00000015411	sf3a3	86	64.468	ENSRROG00000032346	-	100	65.319	Rhinopithecus_roxellana
ENSEBUG00000015411	sf3a3	83	79.420	ENSSBOG00000032688	SF3A3	100	78.551	Saimiri_boliviensis_boliviensis
ENSEBUG00000015411	sf3a3	79	73.438	ENSSBOG00000026932	-	100	60.437	Saimiri_boliviensis_boliviensis
ENSEBUG00000015411	sf3a3	83	81.538	ENSSHAG00000014530	SF3A3	100	80.879	Sarcophilus_harrisii
ENSEBUG00000015411	sf3a3	92	80.119	ENSSFOG00015005975	sf3a3	100	79.523	Scleropages_formosus
ENSEBUG00000015411	sf3a3	92	79.125	ENSSMAG00000020213	sf3a3	100	78.728	Scophthalmus_maximus
ENSEBUG00000015411	sf3a3	92	76.541	ENSSDUG00000011590	sf3a3	100	76.143	Seriola_dumerili
ENSEBUG00000015411	sf3a3	92	79.523	ENSSLDG00000020635	sf3a3	100	79.125	Seriola_lalandi_dorsalis
ENSEBUG00000015411	sf3a3	92	81.113	ENSSPUG00000004010	SF3A3	100	80.517	Sphenodon_punctatus
ENSEBUG00000015411	sf3a3	92	79.523	ENSSPAG00000018653	sf3a3	100	79.125	Stegastes_partitus
ENSEBUG00000015411	sf3a3	92	81.312	ENSSSCG00000003643	SF3A3	100	80.716	Sus_scrofa
ENSEBUG00000015411	sf3a3	80	81.693	ENSTGUG00000001466	SF3A3	100	80.822	Taeniopygia_guttata
ENSEBUG00000015411	sf3a3	92	77.932	ENSTRUG00000009089	sf3a3	100	77.535	Takifugu_rubripes
ENSEBUG00000015411	sf3a3	92	77.030	ENSTNIG00000009800	sf3a3	100	76.634	Tetraodon_nigroviridis
ENSEBUG00000015411	sf3a3	92	70.577	ENSTBEG00000007614	SF3A3	100	69.980	Tupaia_belangeri
ENSEBUG00000015411	sf3a3	92	81.113	ENSTTRG00000013519	SF3A3	100	81.113	Tursiops_truncatus
ENSEBUG00000015411	sf3a3	92	81.312	ENSUAMG00000006134	SF3A3	100	80.716	Ursus_americanus
ENSEBUG00000015411	sf3a3	92	81.312	ENSUMAG00000021250	SF3A3	100	80.716	Ursus_maritimus
ENSEBUG00000015411	sf3a3	61	86.047	ENSVPAG00000004778	SF3A3	73	86.047	Vicugna_pacos
ENSEBUG00000015411	sf3a3	92	78.131	ENSVVUG00000022908	SF3A3	100	78.131	Vulpes_vulpes
ENSEBUG00000015411	sf3a3	92	79.324	ENSXETG00000022923	sf3a3	100	78.926	Xenopus_tropicalis
ENSEBUG00000015411	sf3a3	92	78.728	ENSXMAG00000017165	sf3a3	100	78.330	Xiphophorus_maculatus