EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015425 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 92201 bases
Position: chrFYBX02005980.1:1401451-1493651
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000024982	zf-C2H2	PF00096.26	2e-23	1	3
ENSEBUP00000024982	zf-C2H2	PF00096.26	2e-23	2	3
ENSEBUP00000024982	zf-C2H2	PF00096.26	2e-23	3	3
ENSEBUP00000024988	zf-C2H2	PF00096.26	3.2e-14	1	3
ENSEBUP00000024988	zf-C2H2	PF00096.26	3.2e-14	2	3
ENSEBUP00000024988	zf-C2H2	PF00096.26	3.2e-14	3	3
ENSEBUP00000024982	zf-met	PF12874.7	2.3e-13	1	3
ENSEBUP00000024982	zf-met	PF12874.7	2.3e-13	2	3
ENSEBUP00000024982	zf-met	PF12874.7	2.3e-13	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025564	-	4758	-	ENSEBUP00000024988	552 (aa)	-	-
ENSEBUT00000025558	-	2772	-	ENSEBUP00000024982	514 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015425	-	54	67.164	ENSAPOG00000002465	sall4	76	61.538	Acanthochromis_polyacanthus
ENSEBUG00000015425	-	62	57.143	ENSACAG00000012748	SALL4	65	58.333	Anolis_carolinensis
ENSEBUG00000015425	-	56	63.380	ENSCPBG00000014995	SALL4	76	61.538	Chrysemys_picta_bellii
ENSEBUG00000015425	-	59	59.722	ENSCGRG00000000462	Sall4	57	58.824	Cricetulus_griseus_crigri
ENSEBUG00000015425	-	56	75.000	ENSDARG00000044485	sall4	64	56.897	Danio_rerio
ENSEBUG00000015425	-	60	59.184	ENSELUG00000005696	sall4	64	56.897	Esox_lucius
ENSEBUG00000015425	-	100	50.000	ENSGACG00000011124	sall4	64	58.621	Gasterosteus_aculeatus
ENSEBUG00000015425	-	50	61.538	ENSGAGG00000002297	SALL4	59	61.538	Gopherus_agassizii
ENSEBUG00000015425	-	92	72.222	ENSKMAG00000002501	sall4	64	58.621	Kryptolebias_marmoratus
ENSEBUG00000015425	-	100	56.897	ENSLBEG00000019951	sall4	65	52.174	Labrus_bergylta
ENSEBUG00000015425	-	68	46.939	ENSLACG00000013898	SALL4	76	46.939	Latimeria_chalumnae
ENSEBUG00000015425	-	51	71.186	ENSMAUG00000015814	Sall4	52	70.370	Mesocricetus_auratus
ENSEBUG00000015425	-	59	61.111	ENSMOCG00000018245	Sall4	65	51.429	Microtus_ochrogaster
ENSEBUG00000015425	-	58	70.370	MGP_CAROLIEiJ_G0024723	Sall4	51	70.370	Mus_caroli
ENSEBUG00000015425	-	58	70.370	ENSMUSG00000027547	Sall4	51	70.370	Mus_musculus
ENSEBUG00000015425	-	59	69.091	MGP_PahariEiJ_G0026164	Sall4	56	58.824	Mus_pahari
ENSEBUG00000015425	-	58	70.370	MGP_SPRETEiJ_G0025643	Sall4	51	70.370	Mus_spretus
ENSEBUG00000015425	-	99	52.174	ENSPKIG00000007074	sall4	63	52.174	Paramormyrops_kingsleyae
ENSEBUG00000015425	-	54	62.319	ENSPEMG00000022706	Sall4	57	58.824	Peromyscus_maniculatus_bairdii
ENSEBUG00000015425	-	85	60.345	ENSPFOG00000001442	sall4	55	60.345	Poecilia_formosa
ENSEBUG00000015425	-	85	60.345	ENSPLAG00000008760	sall4	55	60.345	Poecilia_latipinna
ENSEBUG00000015425	-	85	60.345	ENSPMEG00000008497	sall4	55	60.345	Poecilia_mexicana
ENSEBUG00000015425	-	51	55.172	ENSPNAG00000020929	sall4	63	55.172	Pygocentrus_nattereri
ENSEBUG00000015425	-	55	75.000	ENSSFOG00015021075	sall4	62	56.897	Scleropages_formosus
ENSEBUG00000015425	-	100	58.621	ENSSMAG00000019218	sall4	64	58.621	Scophthalmus_maximus