EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015447 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rab11b|wu:fb07g11|zgc:55760
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 24462 bases
Position: chrFYBX02010238.1:3035567-3060028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025022	MMR_HSR1	PF01926.23	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025598	-	1828	-	ENSEBUP00000025022	217 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015447	-	100	77.880	ENSEBUG00000007493	rab11a	100	77.880
ENSEBUG00000015447	-	91	34.328	ENSEBUG00000010861	-	80	34.328
ENSEBUG00000015447	-	99	43.925	ENSEBUG00000015886	-	100	43.925
ENSEBUG00000015447	-	76	36.970	ENSEBUG00000000963	-	92	36.970
ENSEBUG00000015447	-	69	31.613	ENSEBUG00000014186	-	74	33.533
ENSEBUG00000015447	-	75	41.104	ENSEBUG00000012680	-	68	41.104
ENSEBUG00000015447	-	69	32.667	ENSEBUG00000015012	kras	86	33.537
ENSEBUG00000015447	-	54	31.356	ENSEBUG00000004741	arl4cb	57	31.356
ENSEBUG00000015447	-	74	31.677	ENSEBUG00000003784	rhebl1	88	32.639
ENSEBUG00000015447	-	76	43.713	ENSEBUG00000006581	rab12	81	43.713
ENSEBUG00000015447	-	94	37.799	ENSEBUG00000004967	rab9b	97	37.799
ENSEBUG00000015447	-	73	35.849	ENSEBUG00000003339	-	76	35.849
ENSEBUG00000015447	-	94	38.164	ENSEBUG00000004971	-	95	38.164
ENSEBUG00000015447	-	75	30.061	ENSEBUG00000002306	rheb	88	30.061
ENSEBUG00000015447	-	94	42.157	ENSEBUG00000014794	rab5c	90	42.157
ENSEBUG00000015447	-	100	80.734	ENSEBUG00000011775	rab11ba	99	82.439
ENSEBUG00000015447	-	75	39.053	ENSEBUG00000009003	-	74	39.053
ENSEBUG00000015447	-	78	41.420	ENSEBUG00000015845	-	75	41.420
ENSEBUG00000015447	-	69	33.333	ENSEBUG00000004670	hrasb	85	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015447	-	100	81.651	ENSG00000185236	RAB11B	100	86.957	Homo_sapiens
ENSEBUG00000015447	-	99	80.365	ENSAMEG00000004955	RAB11B	99	80.365	Ailuropoda_melanoleuca
ENSEBUG00000015447	-	78	87.647	ENSACIG00000024374	rab11ba	70	87.647	Amphilophus_citrinellus
ENSEBUG00000015447	-	100	79.817	ENSAOCG00000018050	rab11ba	100	79.817	Amphiprion_ocellaris
ENSEBUG00000015447	-	100	79.358	ENSAPEG00000009177	rab11ba	100	79.358	Amphiprion_percula
ENSEBUG00000015447	-	100	80.275	ENSATEG00000023730	rab11ba	100	80.275	Anabas_testudineus
ENSEBUG00000015447	-	100	81.651	ENSANAG00000037616	RAB11B	95	89.412	Aotus_nancymaae
ENSEBUG00000015447	-	100	78.899	ENSACLG00000005420	rab11ba	100	78.899	Astatotilapia_calliptera
ENSEBUG00000015447	-	99	72.685	ENSACLG00000018852	-	97	72.685	Astatotilapia_calliptera
ENSEBUG00000015447	-	99	73.364	WBGene00004274	rab-11.1	99	73.364	Caenorhabditis_elegans
ENSEBUG00000015447	-	100	81.651	ENSCJAG00000010778	RAB11B	95	89.412	Callithrix_jacchus
ENSEBUG00000015447	-	100	81.651	ENSCAFG00000032060	RAB11B	100	81.651	Canis_familiaris
ENSEBUG00000015447	-	100	81.651	ENSCAFG00020022184	RAB11B	100	81.651	Canis_lupus_dingo
ENSEBUG00000015447	-	100	81.651	ENSTSYG00000014758	RAB11B	99	82.927	Carlito_syrichta
ENSEBUG00000015447	-	100	81.193	ENSCPOG00000030154	RAB11B	100	81.193	Cavia_porcellus
ENSEBUG00000015447	-	100	81.651	ENSCCAG00000031042	RAB11B	94	89.412	Cebus_capucinus
ENSEBUG00000015447	-	100	81.651	ENSCLAG00000003207	RAB11B	100	81.651	Chinchilla_lanigera
ENSEBUG00000015447	-	100	81.651	ENSCSAG00000008024	RAB11B	100	81.651	Chlorocebus_sabaeus
ENSEBUG00000015447	-	100	69.266	ENSCHOG00000013525	RAB11B	100	69.266	Choloepus_hoffmanni
ENSEBUG00000015447	-	100	76.712	ENSCING00000009526	-	100	76.712	Ciona_intestinalis
ENSEBUG00000015447	-	100	81.651	ENSCANG00000040517	RAB11B	100	81.651	Colobus_angolensis_palliatus
ENSEBUG00000015447	-	100	81.651	ENSCGRG00001013827	Rab11b	100	81.651	Cricetulus_griseus_chok1gshd
ENSEBUG00000015447	-	100	81.651	ENSCGRG00000010967	Rab11b	100	81.651	Cricetulus_griseus_crigri
ENSEBUG00000015447	-	100	80.734	ENSCSEG00000007121	rab11ba	84	80.734	Cynoglossus_semilaevis
ENSEBUG00000015447	-	100	80.734	ENSDARG00000041878	rab11ba	100	81.951	Danio_rerio
ENSEBUG00000015447	-	100	81.651	ENSDNOG00000014618	RAB11B	97	81.651	Dasypus_novemcinctus
ENSEBUG00000015447	-	100	80.275	ENSDNOG00000004134	-	100	80.275	Dasypus_novemcinctus
ENSEBUG00000015447	-	100	81.651	ENSDORG00000006304	Rab11b	100	81.651	Dipodomys_ordii
ENSEBUG00000015447	-	66	90.210	ENSEEUG00000009165	-	100	90.210	Erinaceus_europaeus
ENSEBUG00000015447	-	88	84.293	ENSELUG00000019240	-	98	84.293	Esox_lucius
ENSEBUG00000015447	-	100	81.193	ENSFCAG00000015216	RAB11B	100	81.193	Felis_catus
ENSEBUG00000015447	-	100	81.193	ENSFDAG00000019872	RAB11B	100	81.193	Fukomys_damarensis
ENSEBUG00000015447	-	100	80.275	ENSFHEG00000022642	rab11ba	100	80.275	Fundulus_heteroclitus
ENSEBUG00000015447	-	100	78.899	ENSGMOG00000007390	rab11ba	99	78.899	Gadus_morhua
ENSEBUG00000015447	-	100	80.734	ENSGAFG00000005679	rab11ba	100	80.734	Gambusia_affinis
ENSEBUG00000015447	-	100	81.193	ENSGAGG00000012557	-	100	81.193	Gopherus_agassizii
ENSEBUG00000015447	-	100	81.651	ENSHGLG00000014984	RAB11B	100	81.651	Heterocephalus_glaber_female
ENSEBUG00000015447	-	100	81.193	ENSHGLG00100003638	RAB11B	100	81.193	Heterocephalus_glaber_male
ENSEBUG00000015447	-	100	81.651	ENSSTOG00000031571	RAB11B	100	81.651	Ictidomys_tridecemlineatus
ENSEBUG00000015447	-	100	81.651	ENSJJAG00000018891	Rab11b	100	81.651	Jaculus_jaculus
ENSEBUG00000015447	-	100	80.734	ENSKMAG00000006082	-	100	80.734	Kryptolebias_marmoratus
ENSEBUG00000015447	-	100	80.275	ENSLBEG00000006087	rab11ba	100	80.275	Labrus_bergylta
ENSEBUG00000015447	-	78	88.824	ENSLACG00000016974	RAB11B	99	88.824	Latimeria_chalumnae
ENSEBUG00000015447	-	100	81.651	ENSLAFG00000013598	RAB11B	100	81.651	Loxodonta_africana
ENSEBUG00000015447	-	100	81.651	ENSMNEG00000039759	-	100	81.651	Macaca_nemestrina
ENSEBUG00000015447	-	100	79.817	ENSMAMG00000018556	rab11ba	100	79.817	Mastacembelus_armatus
ENSEBUG00000015447	-	99	72.685	ENSMZEG00005019251	-	97	72.685	Maylandia_zebra
ENSEBUG00000015447	-	100	78.899	ENSMZEG00005010947	rab11ba	100	78.899	Maylandia_zebra
ENSEBUG00000015447	-	100	81.193	ENSMAUG00000021579	Rab11b	100	81.193	Mesocricetus_auratus
ENSEBUG00000015447	-	100	81.193	ENSMOCG00000012667	Rab11b	100	81.193	Microtus_ochrogaster
ENSEBUG00000015447	-	100	79.358	ENSMALG00000021949	rab11ba	100	79.358	Monopterus_albus
ENSEBUG00000015447	-	100	81.651	MGP_CAROLIEiJ_G0021415	Rab11b	97	89.655	Mus_caroli
ENSEBUG00000015447	-	100	80.734	ENSMUSG00000077450	Rab11b	97	89.655	Mus_musculus
ENSEBUG00000015447	-	100	81.651	MGP_PahariEiJ_G0020420	Rab11b	100	81.651	Mus_pahari
ENSEBUG00000015447	-	100	81.651	MGP_SPRETEiJ_G0022327	Rab11b	97	89.655	Mus_spretus
ENSEBUG00000015447	-	100	81.193	ENSMPUG00000007263	RAB11B	100	81.193	Mustela_putorius_furo
ENSEBUG00000015447	-	100	77.828	ENSMLUG00000002308	-	100	77.828	Myotis_lucifugus
ENSEBUG00000015447	-	100	81.651	ENSNGAG00000015757	Rab11b	100	81.651	Nannospalax_galili
ENSEBUG00000015447	-	100	79.358	ENSNBRG00000023898	rab11ba	84	79.358	Neolamprologus_brichardi
ENSEBUG00000015447	-	100	81.651	ENSNLEG00000001733	RAB11B	99	83.010	Nomascus_leucogenys
ENSEBUG00000015447	-	100	81.651	ENSODEG00000011371	RAB11B	100	81.651	Octodon_degus
ENSEBUG00000015447	-	100	79.817	ENSONIG00000002535	rab11ba	100	79.817	Oreochromis_niloticus
ENSEBUG00000015447	-	72	92.357	ENSOCUG00000028208	RAB11B	80	76.000	Oryctolagus_cuniculus
ENSEBUG00000015447	-	99	81.106	ENSORLG00000015307	rab11ba	99	81.106	Oryzias_latipes
ENSEBUG00000015447	-	99	81.106	ENSORLG00020020816	rab11ba	99	81.106	Oryzias_latipes_hni
ENSEBUG00000015447	-	99	81.481	ENSORLG00015016946	rab11ba	81	81.481	Oryzias_latipes_hsok
ENSEBUG00000015447	-	99	81.106	ENSOMEG00000002581	rab11ba	99	81.106	Oryzias_melastigma
ENSEBUG00000015447	-	100	81.651	ENSOGAG00000003227	RAB11B	99	81.651	Otolemur_garnettii
ENSEBUG00000015447	-	100	81.651	ENSOARG00000003801	RAB11B	97	81.651	Ovis_aries
ENSEBUG00000015447	-	80	87.931	ENSPPRG00000010160	RAB11B	85	87.931	Panthera_pardus
ENSEBUG00000015447	-	100	81.651	ENSPEMG00000014536	Rab11b	100	81.651	Peromyscus_maniculatus_bairdii
ENSEBUG00000015447	-	94	80.676	ENSPMAG00000009335	-	100	80.676	Petromyzon_marinus
ENSEBUG00000015447	-	100	80.734	ENSPFOG00000006159	rab11ba	100	80.734	Poecilia_formosa
ENSEBUG00000015447	-	100	80.734	ENSPLAG00000014243	rab11ba	100	80.734	Poecilia_latipinna
ENSEBUG00000015447	-	100	80.734	ENSPMEG00000007917	rab11ba	75	80.734	Poecilia_mexicana
ENSEBUG00000015447	-	100	80.734	ENSPREG00000006357	rab11ba	78	80.734	Poecilia_reticulata
ENSEBUG00000015447	-	100	81.651	ENSPPYG00000009504	RAB11B	100	81.651	Pongo_abelii
ENSEBUG00000015447	-	100	74.312	ENSPCAG00000016118	RAB11B	100	74.312	Procavia_capensis
ENSEBUG00000015447	-	67	88.356	ENSPCOG00000008655	-	100	88.356	Propithecus_coquereli
ENSEBUG00000015447	-	100	81.651	ENSPCOG00000028053	RAB11B	93	89.412	Propithecus_coquereli
ENSEBUG00000015447	-	100	81.651	ENSPVAG00000009645	RAB11B	100	81.651	Pteropus_vampyrus
ENSEBUG00000015447	-	100	78.899	ENSPNYG00000019644	rab11ba	100	78.899	Pundamilia_nyererei
ENSEBUG00000015447	-	94	65.700	ENSPNYG00000023810	-	90	65.700	Pundamilia_nyererei
ENSEBUG00000015447	-	100	81.651	ENSPNAG00000006431	-	100	81.651	Pygocentrus_nattereri
ENSEBUG00000015447	-	100	80.734	ENSPNAG00000020475	rab11ba	100	80.734	Pygocentrus_nattereri
ENSEBUG00000015447	-	100	81.651	ENSRNOG00000007648	Rab11b	100	81.651	Rattus_norvegicus
ENSEBUG00000015447	-	100	81.651	ENSSBOG00000035094	RAB11B	95	89.412	Saimiri_boliviensis_boliviensis
ENSEBUG00000015447	-	100	80.734	ENSSDUG00000002965	rab11ba	100	80.734	Seriola_dumerili
ENSEBUG00000015447	-	100	80.734	ENSSLDG00000005221	rab11ba	100	80.734	Seriola_lalandi_dorsalis
ENSEBUG00000015447	-	100	79.358	ENSSPAG00000017313	rab11ba	100	79.358	Stegastes_partitus
ENSEBUG00000015447	-	100	81.651	ENSSSCG00000013600	RAB11B	100	81.651	Sus_scrofa
ENSEBUG00000015447	-	59	93.798	ENSTBEG00000014750	-	100	93.798	Tupaia_belangeri
ENSEBUG00000015447	-	100	81.651	ENSTTRG00000009758	RAB11B	100	81.651	Tursiops_truncatus
ENSEBUG00000015447	-	94	69.268	ENSUMAG00000014594	RAB11B	97	69.268	Ursus_maritimus
ENSEBUG00000015447	-	100	81.651	ENSVVUG00000025210	RAB11B	100	81.651	Vulpes_vulpes
ENSEBUG00000015447	-	100	79.817	ENSXETG00000021890	rab11b.2	99	79.817	Xenopus_tropicalis
ENSEBUG00000015447	-	61	90.226	ENSXCOG00000009194	-	98	90.226	Xiphophorus_couchianus
ENSEBUG00000015447	-	100	80.734	ENSXMAG00000013416	rab11ba	100	80.734	Xiphophorus_maculatus