EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015459 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 45836 bases
Position: chrFYBX02009751.1:81967-127802
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025072	Suf	PF05843.14	1.1e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025647	-	1713	-	ENSEBUP00000025072	570 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015459	cstf3	96	74.050	ENSG00000176102	CSTF3	84	74.050	Homo_sapiens
ENSEBUG00000015459	cstf3	96	74.295	ENSAPOG00000014054	cstf3	84	74.295	Acanthochromis_polyacanthus
ENSEBUG00000015459	cstf3	96	74.050	ENSAMEG00000007187	CSTF3	84	74.050	Ailuropoda_melanoleuca
ENSEBUG00000015459	cstf3	86	70.019	ENSACIG00000005539	cstf3	86	70.446	Amphilophus_citrinellus
ENSEBUG00000015459	cstf3	96	74.295	ENSAOCG00000010930	cstf3	84	74.295	Amphiprion_ocellaris
ENSEBUG00000015459	cstf3	96	74.295	ENSAPEG00000007903	cstf3	84	74.295	Amphiprion_percula
ENSEBUG00000015459	cstf3	96	74.793	ENSATEG00000000190	cstf3	84	74.793	Anabas_testudineus
ENSEBUG00000015459	cstf3	96	73.884	ENSAPLG00000007217	CSTF3	85	73.884	Anas_platyrhynchos
ENSEBUG00000015459	cstf3	96	74.050	ENSACAG00000002823	CSTF3	84	74.050	Anolis_carolinensis
ENSEBUG00000015459	cstf3	96	75.421	ENSANAG00000020699	CSTF3	92	78.910	Aotus_nancymaae
ENSEBUG00000015459	cstf3	96	75.671	ENSACLG00000007820	cstf3	84	75.671	Astatotilapia_calliptera
ENSEBUG00000015459	cstf3	96	74.338	ENSAMXG00000014198	cstf3	84	74.503	Astyanax_mexicanus
ENSEBUG00000015459	cstf3	96	74.050	ENSBTAG00000008617	CSTF3	87	73.980	Bos_taurus
ENSEBUG00000015459	cstf3	95	48.947	WBGene00006307	suf-1	84	48.947	Caenorhabditis_elegans
ENSEBUG00000015459	cstf3	96	75.421	ENSCJAG00000005533	CSTF3	86	74.954	Callithrix_jacchus
ENSEBUG00000015459	cstf3	96	74.050	ENSCAFG00000007264	CSTF3	84	74.050	Canis_familiaris
ENSEBUG00000015459	cstf3	96	75.421	ENSCAFG00020002715	CSTF3	84	75.421	Canis_lupus_dingo
ENSEBUG00000015459	cstf3	96	75.421	ENSCHIG00000016418	CSTF3	86	75.421	Capra_hircus
ENSEBUG00000015459	cstf3	96	74.050	ENSTSYG00000000451	CSTF3	95	76.905	Carlito_syrichta
ENSEBUG00000015459	cstf3	91	63.869	ENSCAPG00000010958	CSTF3	83	63.869	Cavia_aperea
ENSEBUG00000015459	cstf3	96	74.050	ENSCPOG00000005545	CSTF3	85	74.050	Cavia_porcellus
ENSEBUG00000015459	cstf3	96	74.050	ENSCCAG00000024790	CSTF3	92	77.586	Cebus_capucinus
ENSEBUG00000015459	cstf3	96	74.050	ENSCATG00000007080	CSTF3	86	74.954	Cercocebus_atys
ENSEBUG00000015459	cstf3	96	74.050	ENSCLAG00000016179	CSTF3	84	74.050	Chinchilla_lanigera
ENSEBUG00000015459	cstf3	75	84.739	ENSCHOG00000002497	CSTF3	64	84.739	Choloepus_hoffmanni
ENSEBUG00000015459	cstf3	96	73.884	ENSCPBG00000006753	CSTF3	84	73.884	Chrysemys_picta_bellii
ENSEBUG00000015459	cstf3	96	57.635	ENSCING00000006401	-	84	57.800	Ciona_intestinalis
ENSEBUG00000015459	cstf3	96	57.895	ENSCSAVG00000004851	-	85	57.895	Ciona_savignyi
ENSEBUG00000015459	cstf3	96	74.050	ENSCANG00000035468	CSTF3	86	74.954	Colobus_angolensis_palliatus
ENSEBUG00000015459	cstf3	96	74.215	ENSCGRG00001014773	Cstf3	84	74.215	Cricetulus_griseus_chok1gshd
ENSEBUG00000015459	cstf3	96	74.215	ENSCGRG00000004142	Cstf3	84	74.215	Cricetulus_griseus_crigri
ENSEBUG00000015459	cstf3	96	74.461	ENSCSEG00000014283	cstf3	84	74.461	Cynoglossus_semilaevis
ENSEBUG00000015459	cstf3	96	73.964	ENSCVAG00000019739	cstf3	84	73.964	Cyprinodon_variegatus
ENSEBUG00000015459	cstf3	96	75.124	ENSDARG00000018904	cstf3	84	75.124	Danio_rerio
ENSEBUG00000015459	cstf3	96	74.050	ENSDNOG00000007366	CSTF3	84	74.050	Dasypus_novemcinctus
ENSEBUG00000015459	cstf3	96	67.822	ENSDORG00000005898	Cstf3	84	67.822	Dipodomys_ordii
ENSEBUG00000015459	cstf3	95	54.229	FBgn0003559	su(f)	82	54.229	Drosophila_melanogaster
ENSEBUG00000015459	cstf3	81	73.828	ENSETEG00000017097	CSTF3	71	73.828	Echinops_telfairi
ENSEBUG00000015459	cstf3	96	74.050	ENSEASG00005019884	CSTF3	93	76.905	Equus_asinus_asinus
ENSEBUG00000015459	cstf3	96	74.050	ENSECAG00000023338	CSTF3	93	76.905	Equus_caballus
ENSEBUG00000015459	cstf3	96	69.180	ENSEEUG00000015167	CSTF3	84	69.180	Erinaceus_europaeus
ENSEBUG00000015459	cstf3	96	73.964	ENSELUG00000023393	cstf3	84	73.964	Esox_lucius
ENSEBUG00000015459	cstf3	96	74.050	ENSFCAG00000030711	CSTF3	84	74.050	Felis_catus
ENSEBUG00000015459	cstf3	96	74.050	ENSFALG00000010764	CSTF3	87	73.274	Ficedula_albicollis
ENSEBUG00000015459	cstf3	96	74.050	ENSFDAG00000012082	CSTF3	84	74.050	Fukomys_damarensis
ENSEBUG00000015459	cstf3	96	73.632	ENSFHEG00000020623	cstf3	84	73.632	Fundulus_heteroclitus
ENSEBUG00000015459	cstf3	96	74.295	ENSGMOG00000012275	cstf3	84	74.295	Gadus_morhua
ENSEBUG00000015459	cstf3	96	74.050	ENSGALG00000011685	CSTF3	84	74.050	Gallus_gallus
ENSEBUG00000015459	cstf3	96	73.798	ENSGAFG00000002181	cstf3	84	73.798	Gambusia_affinis
ENSEBUG00000015459	cstf3	96	74.461	ENSGACG00000015997	cstf3	84	74.461	Gasterosteus_aculeatus
ENSEBUG00000015459	cstf3	96	73.884	ENSGAGG00000006200	CSTF3	84	73.884	Gopherus_agassizii
ENSEBUG00000015459	cstf3	96	70.370	ENSGGOG00000026591	CSTF3	92	76.303	Gorilla_gorilla
ENSEBUG00000015459	cstf3	96	75.503	ENSHBUG00000016656	cstf3	84	75.503	Haplochromis_burtoni
ENSEBUG00000015459	cstf3	96	74.050	ENSHGLG00000017834	CSTF3	84	74.050	Heterocephalus_glaber_female
ENSEBUG00000015459	cstf3	96	74.050	ENSHGLG00100018042	CSTF3	85	74.050	Heterocephalus_glaber_male
ENSEBUG00000015459	cstf3	96	74.624	ENSHCOG00000015218	cstf3	84	74.624	Hippocampus_comes
ENSEBUG00000015459	cstf3	96	74.461	ENSIPUG00000013170	CSTF3	85	74.461	Ictalurus_punctatus
ENSEBUG00000015459	cstf3	96	74.050	ENSSTOG00000013306	CSTF3	84	74.050	Ictidomys_tridecemlineatus
ENSEBUG00000015459	cstf3	96	68.143	ENSJJAG00000018430	Cstf3	82	68.143	Jaculus_jaculus
ENSEBUG00000015459	cstf3	96	73.798	ENSKMAG00000010916	cstf3	87	73.595	Kryptolebias_marmoratus
ENSEBUG00000015459	cstf3	96	74.295	ENSLBEG00000002306	cstf3	84	74.295	Labrus_bergylta
ENSEBUG00000015459	cstf3	96	73.632	ENSLACG00000017296	CSTF3	84	73.632	Latimeria_chalumnae
ENSEBUG00000015459	cstf3	96	74.338	ENSLOCG00000004415	cstf3	84	74.338	Lepisosteus_oculatus
ENSEBUG00000015459	cstf3	96	74.050	ENSLAFG00000008712	CSTF3	84	74.050	Loxodonta_africana
ENSEBUG00000015459	cstf3	96	74.050	ENSMFAG00000029516	CSTF3	91	76.905	Macaca_fascicularis
ENSEBUG00000015459	cstf3	96	74.050	ENSMMUG00000002542	CSTF3	84	74.050	Macaca_mulatta
ENSEBUG00000015459	cstf3	96	74.050	ENSMNEG00000021807	CSTF3	86	74.954	Macaca_nemestrina
ENSEBUG00000015459	cstf3	96	74.050	ENSMLEG00000039594	CSTF3	94	76.905	Mandrillus_leucophaeus
ENSEBUG00000015459	cstf3	96	75.845	ENSMAMG00000020423	cstf3	84	75.845	Mastacembelus_armatus
ENSEBUG00000015459	cstf3	96	75.671	ENSMZEG00005012082	cstf3	85	75.671	Maylandia_zebra
ENSEBUG00000015459	cstf3	96	74.050	ENSMGAG00000001383	CSTF3	84	74.050	Meleagris_gallopavo
ENSEBUG00000015459	cstf3	96	74.215	ENSMAUG00000002487	Cstf3	84	74.215	Mesocricetus_auratus
ENSEBUG00000015459	cstf3	96	74.050	ENSMICG00000004784	CSTF3	86	74.954	Microcebus_murinus
ENSEBUG00000015459	cstf3	96	74.215	ENSMOCG00000017583	Cstf3	86	73.411	Microtus_ochrogaster
ENSEBUG00000015459	cstf3	96	74.129	ENSMMOG00000016026	cstf3	80	74.129	Mola_mola
ENSEBUG00000015459	cstf3	96	73.884	ENSMODG00000009745	-	84	74.050	Monodelphis_domestica
ENSEBUG00000015459	cstf3	96	67.438	ENSMODG00000025205	-	84	67.438	Monodelphis_domestica
ENSEBUG00000015459	cstf3	96	74.709	ENSMALG00000012050	cstf3	84	74.709	Monopterus_albus
ENSEBUG00000015459	cstf3	96	74.215	MGP_CAROLIEiJ_G0024026	Cstf3	84	74.215	Mus_caroli
ENSEBUG00000015459	cstf3	96	74.215	ENSMUSG00000027176	Cstf3	84	74.215	Mus_musculus
ENSEBUG00000015459	cstf3	96	74.215	MGP_PahariEiJ_G0025464	Cstf3	84	74.215	Mus_pahari
ENSEBUG00000015459	cstf3	96	74.215	MGP_SPRETEiJ_G0024939	Cstf3	84	74.215	Mus_spretus
ENSEBUG00000015459	cstf3	96	74.050	ENSMPUG00000011457	CSTF3	84	74.050	Mustela_putorius_furo
ENSEBUG00000015459	cstf3	96	74.050	ENSMLUG00000003073	-	84	74.050	Myotis_lucifugus
ENSEBUG00000015459	cstf3	96	72.562	ENSMLUG00000026022	-	84	72.562	Myotis_lucifugus
ENSEBUG00000015459	cstf3	96	74.215	ENSNGAG00000010677	Cstf3	85	74.215	Nannospalax_galili
ENSEBUG00000015459	cstf3	86	75.791	ENSNBRG00000007345	cstf3	86	75.791	Neolamprologus_brichardi
ENSEBUG00000015459	cstf3	96	75.421	ENSNLEG00000017901	CSTF3	93	78.910	Nomascus_leucogenys
ENSEBUG00000015459	cstf3	83	69.482	ENSMEUG00000005640	-	99	69.482	Notamacropus_eugenii
ENSEBUG00000015459	cstf3	59	80.645	ENSOPRG00000000199	-	51	80.645	Ochotona_princeps
ENSEBUG00000015459	cstf3	96	75.421	ENSODEG00000016737	-	84	75.421	Octodon_degus
ENSEBUG00000015459	cstf3	85	71.881	ENSODEG00000006311	-	81	71.881	Octodon_degus
ENSEBUG00000015459	cstf3	96	74.793	ENSONIG00000005563	cstf3	84	74.793	Oreochromis_niloticus
ENSEBUG00000015459	cstf3	88	74.234	ENSOANG00000015140	CSTF3	85	74.234	Ornithorhynchus_anatinus
ENSEBUG00000015459	cstf3	96	74.050	ENSOCUG00000015417	CSTF3	84	74.050	Oryctolagus_cuniculus
ENSEBUG00000015459	cstf3	96	73.964	ENSORLG00000009762	cstf3	84	73.964	Oryzias_latipes
ENSEBUG00000015459	cstf3	96	74.210	ENSORLG00020005540	cstf3	84	74.210	Oryzias_latipes_hni
ENSEBUG00000015459	cstf3	96	75.507	ENSORLG00015003551	cstf3	84	75.507	Oryzias_latipes_hsok
ENSEBUG00000015459	cstf3	96	74.129	ENSOMEG00000003848	cstf3	84	74.129	Oryzias_melastigma
ENSEBUG00000015459	cstf3	96	73.684	ENSOGAG00000010229	CSTF3	84	73.684	Otolemur_garnettii
ENSEBUG00000015459	cstf3	88	74.684	ENSOARG00000017271	CSTF3	85	74.684	Ovis_aries
ENSEBUG00000015459	cstf3	96	73.569	ENSPPAG00000027358	CSTF3	85	73.569	Pan_paniscus
ENSEBUG00000015459	cstf3	96	74.050	ENSPPRG00000016852	CSTF3	84	74.050	Panthera_pardus
ENSEBUG00000015459	cstf3	96	74.050	ENSPTIG00000008716	CSTF3	84	74.050	Panthera_tigris_altaica
ENSEBUG00000015459	cstf3	96	74.050	ENSPTRG00000003485	CSTF3	84	74.050	Pan_troglodytes
ENSEBUG00000015459	cstf3	96	74.050	ENSPANG00000013722	CSTF3	94	76.905	Papio_anubis
ENSEBUG00000015459	cstf3	96	73.798	ENSPKIG00000023648	cstf3	84	73.798	Paramormyrops_kingsleyae
ENSEBUG00000015459	cstf3	96	74.215	ENSPSIG00000009173	CSTF3	84	74.215	Pelodiscus_sinensis
ENSEBUG00000015459	cstf3	85	78.394	ENSPMGG00000000164	cstf3	95	78.394	Periophthalmus_magnuspinnatus
ENSEBUG00000015459	cstf3	96	74.957	ENSPEMG00000011481	Cstf3	84	74.957	Peromyscus_maniculatus_bairdii
ENSEBUG00000015459	cstf3	96	73.026	ENSPMAG00000007282	cstf3	85	73.026	Petromyzon_marinus
ENSEBUG00000015459	cstf3	96	65.557	ENSPCIG00000030419	-	75	65.557	Phascolarctos_cinereus
ENSEBUG00000015459	cstf3	96	71.452	ENSPCIG00000026406	-	86	74.954	Phascolarctos_cinereus
ENSEBUG00000015459	cstf3	96	73.964	ENSPFOG00000017239	cstf3	84	73.964	Poecilia_formosa
ENSEBUG00000015459	cstf3	96	73.798	ENSPLAG00000009456	cstf3	84	73.798	Poecilia_latipinna
ENSEBUG00000015459	cstf3	96	73.964	ENSPMEG00000010320	cstf3	84	73.964	Poecilia_mexicana
ENSEBUG00000015459	cstf3	96	75.338	ENSPREG00000013549	cstf3	84	75.338	Poecilia_reticulata
ENSEBUG00000015459	cstf3	96	74.050	ENSPPYG00000003375	CSTF3	84	74.050	Pongo_abelii
ENSEBUG00000015459	cstf3	69	75.926	ENSPCAG00000008025	-	60	75.926	Procavia_capensis
ENSEBUG00000015459	cstf3	96	71.212	ENSPCOG00000014417	CSTF3	83	71.212	Propithecus_coquereli
ENSEBUG00000015459	cstf3	96	70.909	ENSPVAG00000002350	CSTF3	84	70.909	Pteropus_vampyrus
ENSEBUG00000015459	cstf3	96	75.503	ENSPNYG00000018259	cstf3	85	75.503	Pundamilia_nyererei
ENSEBUG00000015459	cstf3	96	74.461	ENSPNAG00000020182	cstf3	84	74.461	Pygocentrus_nattereri
ENSEBUG00000015459	cstf3	86	74.768	ENSRNOG00000012089	Cstf3	86	74.768	Rattus_norvegicus
ENSEBUG00000015459	cstf3	96	74.050	ENSRBIG00000044258	CSTF3	86	74.954	Rhinopithecus_bieti
ENSEBUG00000015459	cstf3	96	74.050	ENSRROG00000043450	CSTF3	86	74.954	Rhinopithecus_roxellana
ENSEBUG00000015459	cstf3	96	74.050	ENSSBOG00000024764	CSTF3	94	76.905	Saimiri_boliviensis_boliviensis
ENSEBUG00000015459	cstf3	96	73.884	ENSSHAG00000018128	-	84	73.719	Sarcophilus_harrisii
ENSEBUG00000015459	cstf3	96	69.154	ENSSHAG00000003135	-	84	69.154	Sarcophilus_harrisii
ENSEBUG00000015459	cstf3	96	73.798	ENSSFOG00015022133	cstf3	84	73.798	Scleropages_formosus
ENSEBUG00000015459	cstf3	96	74.461	ENSSMAG00000002197	cstf3	93	74.300	Scophthalmus_maximus
ENSEBUG00000015459	cstf3	96	74.627	ENSSDUG00000020426	cstf3	84	74.627	Seriola_dumerili
ENSEBUG00000015459	cstf3	96	75.000	ENSSLDG00000025649	cstf3	87	75.000	Seriola_lalandi_dorsalis
ENSEBUG00000015459	cstf3	96	74.050	ENSSARG00000000391	CSTF3	84	74.050	Sorex_araneus
ENSEBUG00000015459	cstf3	96	73.884	ENSSPUG00000010546	CSTF3	87	73.884	Sphenodon_punctatus
ENSEBUG00000015459	cstf3	96	74.295	ENSSPAG00000004958	cstf3	84	74.295	Stegastes_partitus
ENSEBUG00000015459	cstf3	96	73.884	ENSSSCG00000040954	CSTF3	84	73.884	Sus_scrofa
ENSEBUG00000015459	cstf3	96	74.050	ENSTGUG00000005010	CSTF3	85	74.050	Taeniopygia_guttata
ENSEBUG00000015459	cstf3	96	73.964	ENSTRUG00000004959	cstf3	88	73.684	Takifugu_rubripes
ENSEBUG00000015459	cstf3	96	74.627	ENSTNIG00000013811	cstf3	84	74.627	Tetraodon_nigroviridis
ENSEBUG00000015459	cstf3	88	74.503	ENSTBEG00000001544	CSTF3	78	74.503	Tupaia_belangeri
ENSEBUG00000015459	cstf3	96	71.973	ENSTTRG00000016366	CSTF3	84	71.973	Tursiops_truncatus
ENSEBUG00000015459	cstf3	96	74.050	ENSUMAG00000018971	CSTF3	90	77.629	Ursus_maritimus
ENSEBUG00000015459	cstf3	96	73.884	ENSVPAG00000007800	CSTF3	84	73.884	Vicugna_pacos
ENSEBUG00000015459	cstf3	96	75.421	ENSVVUG00000014938	CSTF3	86	74.954	Vulpes_vulpes
ENSEBUG00000015459	cstf3	88	64.758	ENSXETG00000021399	cstf3	89	64.727	Xenopus_tropicalis
ENSEBUG00000015459	cstf3	73	34.979	ENSXETG00000017946	-	96	34.979	Xenopus_tropicalis
ENSEBUG00000015459	cstf3	86	74.302	ENSXCOG00000011741	cstf3	86	74.302	Xiphophorus_couchianus
ENSEBUG00000015459	cstf3	96	73.798	ENSXMAG00000009545	cstf3	84	73.798	Xiphophorus_maculatus