EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015605 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 30313 bases
Position: chrFYBX02009163.1:94562-124874
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025298	PseudoU_synth_2	PF00849.22	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025874	RPUSD3-201	5275	-	ENSEBUP00000025298	306 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015605	RPUSD3	67	40.291	ENSG00000156990	RPUSD3	81	37.931	Homo_sapiens
ENSEBUG00000015605	RPUSD3	78	36.066	ENSAMEG00000016227	RPUSD3	67	36.066	Ailuropoda_melanoleuca
ENSEBUG00000015605	RPUSD3	70	38.140	ENSACAG00000009836	RPUSD3	61	38.140	Anolis_carolinensis
ENSEBUG00000015605	RPUSD3	50	32.727	ENSANAG00000007127	-	60	32.716	Aotus_nancymaae
ENSEBUG00000015605	RPUSD3	56	36.994	ENSANAG00000038118	-	82	36.994	Aotus_nancymaae
ENSEBUG00000015605	RPUSD3	66	33.971	ENSANAG00000019945	-	80	33.971	Aotus_nancymaae
ENSEBUG00000015605	RPUSD3	67	38.350	ENSBTAG00000007968	RPUSD3	59	38.350	Bos_taurus
ENSEBUG00000015605	RPUSD3	67	39.320	ENSCAFG00000029733	RPUSD3	60	38.208	Canis_familiaris
ENSEBUG00000015605	RPUSD3	67	39.320	ENSCAFG00020008582	RPUSD3	62	39.512	Canis_lupus_dingo
ENSEBUG00000015605	RPUSD3	67	38.350	ENSCHIG00000026027	RPUSD3	61	38.350	Capra_hircus
ENSEBUG00000015605	RPUSD3	67	35.749	ENSTSYG00000009994	RPUSD3	92	31.731	Carlito_syrichta
ENSEBUG00000015605	RPUSD3	61	39.362	ENSCAPG00000017559	RPUSD3	82	37.017	Cavia_aperea
ENSEBUG00000015605	RPUSD3	61	39.683	ENSCPOG00000037956	RPUSD3	57	39.216	Cavia_porcellus
ENSEBUG00000015605	RPUSD3	67	39.806	ENSCCAG00000029530	RPUSD3	81	37.931	Cebus_capucinus
ENSEBUG00000015605	RPUSD3	67	38.835	ENSCATG00000036939	RPUSD3	81	36.782	Cercocebus_atys
ENSEBUG00000015605	RPUSD3	67	38.350	ENSCSAG00000010506	RPUSD3	58	38.350	Chlorocebus_sabaeus
ENSEBUG00000015605	RPUSD3	55	43.787	ENSCPBG00000008825	RPUSD3	65	43.787	Chrysemys_picta_bellii
ENSEBUG00000015605	RPUSD3	67	38.835	ENSCANG00000040711	RPUSD3	81	36.782	Colobus_angolensis_palliatus
ENSEBUG00000015605	RPUSD3	88	31.852	ENSCGRG00001004923	Rpusd3	70	31.852	Cricetulus_griseus_chok1gshd
ENSEBUG00000015605	RPUSD3	88	31.852	ENSCGRG00000018315	Rpusd3	74	31.852	Cricetulus_griseus_crigri
ENSEBUG00000015605	RPUSD3	67	39.320	ENSDNOG00000039160	RPUSD3	54	39.320	Dasypus_novemcinctus
ENSEBUG00000015605	RPUSD3	62	38.614	ENSDORG00000026827	Rpusd3	69	38.614	Dipodomys_ordii
ENSEBUG00000015605	RPUSD3	63	37.629	ENSETEG00000006538	RPUSD3	54	37.629	Echinops_telfairi
ENSEBUG00000015605	RPUSD3	74	36.726	ENSEASG00005014160	RPUSD3	60	36.726	Equus_asinus_asinus
ENSEBUG00000015605	RPUSD3	67	38.350	ENSECAG00000019988	RPUSD3	57	38.350	Equus_caballus
ENSEBUG00000015605	RPUSD3	67	38.350	ENSFCAG00000014199	RPUSD3	58	38.350	Felis_catus
ENSEBUG00000015605	RPUSD3	66	41.584	ENSFALG00000012968	RPUSD3	75	41.584	Ficedula_albicollis
ENSEBUG00000015605	RPUSD3	61	39.683	ENSFDAG00000008350	RPUSD3	58	39.683	Fukomys_damarensis
ENSEBUG00000015605	RPUSD3	69	40.094	ENSGAGG00000007493	RPUSD3	66	40.094	Gopherus_agassizii
ENSEBUG00000015605	RPUSD3	67	40.291	ENSGGOG00000013120	RPUSD3	81	37.931	Gorilla_gorilla
ENSEBUG00000015605	RPUSD3	65	39.604	ENSHGLG00000011722	RPUSD3	51	39.604	Heterocephalus_glaber_female
ENSEBUG00000015605	RPUSD3	65	39.604	ENSHGLG00100016038	RPUSD3	51	39.604	Heterocephalus_glaber_male
ENSEBUG00000015605	RPUSD3	82	35.135	ENSSTOG00000002125	RPUSD3	71	35.135	Ictidomys_tridecemlineatus
ENSEBUG00000015605	RPUSD3	66	38.235	ENSJJAG00000012679	Rpusd3	68	38.235	Jaculus_jaculus
ENSEBUG00000015605	RPUSD3	67	37.864	ENSLAFG00000017501	RPUSD3	59	37.864	Loxodonta_africana
ENSEBUG00000015605	RPUSD3	67	38.350	ENSMFAG00000032407	RPUSD3	58	38.350	Macaca_fascicularis
ENSEBUG00000015605	RPUSD3	67	38.835	ENSMMUG00000010628	RPUSD3	77	36.571	Macaca_mulatta
ENSEBUG00000015605	RPUSD3	67	38.835	ENSMNEG00000040308	RPUSD3	58	38.835	Macaca_nemestrina
ENSEBUG00000015605	RPUSD3	67	38.835	ENSMLEG00000033940	RPUSD3	81	36.782	Mandrillus_leucophaeus
ENSEBUG00000015605	RPUSD3	66	37.745	ENSMAUG00000015473	Rpusd3	69	37.745	Mesocricetus_auratus
ENSEBUG00000015605	RPUSD3	84	35.094	ENSMICG00000002315	RPUSD3	80	35.632	Microcebus_murinus
ENSEBUG00000015605	RPUSD3	74	34.513	ENSMOCG00000022613	Rpusd3	63	34.513	Microtus_ochrogaster
ENSEBUG00000015605	RPUSD3	69	36.019	ENSMODG00000005210	RPUSD3	55	36.019	Monodelphis_domestica
ENSEBUG00000015605	RPUSD3	65	38.614	MGP_CAROLIEiJ_G0028725	Rpusd3	75	38.614	Mus_caroli
ENSEBUG00000015605	RPUSD3	65	38.119	ENSMUSG00000051169	Rpusd3	74	38.119	Mus_musculus
ENSEBUG00000015605	RPUSD3	88	32.353	MGP_PahariEiJ_G0022476	Rpusd3	81	32.353	Mus_pahari
ENSEBUG00000015605	RPUSD3	65	38.119	MGP_SPRETEiJ_G0029753	Rpusd3	75	38.119	Mus_spretus
ENSEBUG00000015605	RPUSD3	76	35.865	ENSMPUG00000017132	RPUSD3	66	35.865	Mustela_putorius_furo
ENSEBUG00000015605	RPUSD3	67	37.379	ENSMLUG00000006135	RPUSD3	59	37.379	Myotis_lucifugus
ENSEBUG00000015605	RPUSD3	66	37.561	ENSNGAG00000023704	Rpusd3	61	37.561	Nannospalax_galili
ENSEBUG00000015605	RPUSD3	57	37.931	ENSNLEG00000004214	RPUSD3	81	37.931	Nomascus_leucogenys
ENSEBUG00000015605	RPUSD3	61	37.234	ENSMEUG00000013098	-	72	37.634	Notamacropus_eugenii
ENSEBUG00000015605	RPUSD3	67	32.039	ENSOPRG00000002300	RPUSD3	58	32.039	Ochotona_princeps
ENSEBUG00000015605	RPUSD3	61	38.830	ENSODEG00000018137	RPUSD3	70	36.842	Octodon_degus
ENSEBUG00000015605	RPUSD3	75	33.193	ENSOCUG00000027885	RPUSD3	68	33.193	Oryctolagus_cuniculus
ENSEBUG00000015605	RPUSD3	70	39.070	ENSOGAG00000012592	RPUSD3	68	39.070	Otolemur_garnettii
ENSEBUG00000015605	RPUSD3	82	34.646	ENSOARG00000005928	RPUSD3	71	34.646	Ovis_aries
ENSEBUG00000015605	RPUSD3	67	39.806	ENSPPAG00000038083	RPUSD3	81	37.356	Pan_paniscus
ENSEBUG00000015605	RPUSD3	67	37.864	ENSPPRG00000024433	RPUSD3	71	34.118	Panthera_pardus
ENSEBUG00000015605	RPUSD3	67	37.864	ENSPTIG00000006828	RPUSD3	73	34.118	Panthera_tigris_altaica
ENSEBUG00000015605	RPUSD3	67	39.806	ENSPTRG00000051760	RPUSD3	81	37.356	Pan_troglodytes
ENSEBUG00000015605	RPUSD3	67	38.835	ENSPANG00000023885	RPUSD3	81	36.782	Papio_anubis
ENSEBUG00000015605	RPUSD3	82	34.615	ENSPEMG00000017245	Rpusd3	75	34.615	Peromyscus_maniculatus_bairdii
ENSEBUG00000015605	RPUSD3	75	36.957	ENSPCIG00000021901	RPUSD3	66	36.957	Phascolarctos_cinereus
ENSEBUG00000015605	RPUSD3	67	40.291	ENSPPYG00000013676	RPUSD3	58	40.291	Pongo_abelii
ENSEBUG00000015605	RPUSD3	67	37.864	ENSPCOG00000018314	RPUSD3	58	37.864	Propithecus_coquereli
ENSEBUG00000015605	RPUSD3	67	38.350	ENSPVAG00000011107	RPUSD3	58	38.350	Pteropus_vampyrus
ENSEBUG00000015605	RPUSD3	67	38.835	ENSRBIG00000041230	RPUSD3	81	36.782	Rhinopithecus_bieti
ENSEBUG00000015605	RPUSD3	67	38.835	ENSRROG00000043328	RPUSD3	81	36.782	Rhinopithecus_roxellana
ENSEBUG00000015605	RPUSD3	67	39.806	ENSSBOG00000036106	RPUSD3	59	39.806	Saimiri_boliviensis_boliviensis
ENSEBUG00000015605	RPUSD3	67	35.437	ENSSHAG00000015536	RPUSD3	66	35.437	Sarcophilus_harrisii
ENSEBUG00000015605	RPUSD3	67	38.835	ENSSSCG00000011555	RPUSD3	58	38.835	Sus_scrofa
ENSEBUG00000015605	RPUSD3	64	42.640	ENSTGUG00000008744	RPUSD3	84	42.640	Taeniopygia_guttata
ENSEBUG00000015605	RPUSD3	67	35.610	ENSTBEG00000000176	RPUSD3	70	37.379	Tupaia_belangeri
ENSEBUG00000015605	RPUSD3	67	38.350	ENSTTRG00000007544	RPUSD3	58	38.350	Tursiops_truncatus
ENSEBUG00000015605	RPUSD3	79	35.366	ENSUAMG00000011354	RPUSD3	74	35.366	Ursus_americanus
ENSEBUG00000015605	RPUSD3	78	35.246	ENSUMAG00000018830	RPUSD3	67	35.246	Ursus_maritimus
ENSEBUG00000015605	RPUSD3	78	35.656	ENSVVUG00000023735	RPUSD3	89	33.182	Vulpes_vulpes
ENSEBUG00000015605	RPUSD3	75	39.565	ENSXETG00000023546	rpusd3	81	39.565	Xenopus_tropicalis