EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015654 (Gene tree)
Gene ID: -
Gene Symbol: apex2
Alias: zgc:55889
Full Name: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 91492 bases
Position: chrFYBX02009621.1:285380-376871
Accession: ZDB-GENE-040426-835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025411	Exo_endo_phos	PF03372.23	4.7e-18	1	1
ENSEBUP00000025378	Exo_endo_phos	PF03372.23	1e-09	1	1
ENSEBUP00000025389	Exo_endo_phos	PF03372.23	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000025987	-	1401	-	ENSEBUP00000025411	466 (aa)	-	-
ENSEBUT00000025955	-	2818	-	ENSEBUP00000025378	531 (aa)	-	-
ENSEBUT00000025965	-	3788	-	ENSEBUP00000025389	520 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015654	apex2	99	46.035	ENSG00000169188	APEX2	99	46.035	Homo_sapiens
ENSEBUG00000015654	apex2	86	64.384	ENSAPOG00000005805	apex2	74	64.384	Acanthochromis_polyacanthus
ENSEBUG00000015654	apex2	99	44.595	ENSAMEG00000003608	APEX2	99	44.595	Ailuropoda_melanoleuca
ENSEBUG00000015654	apex2	86	60.274	ENSACIG00000010000	apex2	74	60.274	Amphilophus_citrinellus
ENSEBUG00000015654	apex2	86	63.014	ENSAOCG00000021774	apex2	80	63.014	Amphiprion_ocellaris
ENSEBUG00000015654	apex2	86	63.014	ENSAPEG00000020890	apex2	75	63.014	Amphiprion_percula
ENSEBUG00000015654	apex2	86	58.904	ENSATEG00000023600	apex2	73	58.904	Anabas_testudineus
ENSEBUG00000015654	apex2	100	49.012	ENSACAG00000011201	APEX2	99	49.012	Anolis_carolinensis
ENSEBUG00000015654	apex2	99	46.615	ENSANAG00000021907	-	99	46.615	Aotus_nancymaae
ENSEBUG00000015654	apex2	96	40.404	ENSANAG00000020845	-	99	40.404	Aotus_nancymaae
ENSEBUG00000015654	apex2	90	54.958	ENSAMXG00000007422	apex2	88	59.091	Astyanax_mexicanus
ENSEBUG00000015654	apex2	99	45.809	ENSBTAG00000013177	APEX2	99	45.809	Bos_taurus
ENSEBUG00000015654	apex2	99	46.228	ENSCJAG00000016584	APEX2	99	46.228	Callithrix_jacchus
ENSEBUG00000015654	apex2	99	43.977	ENSCAFG00000014310	APEX2	99	43.977	Canis_familiaris
ENSEBUG00000015654	apex2	99	44.742	ENSCAFG00020013818	APEX2	99	44.742	Canis_lupus_dingo
ENSEBUG00000015654	apex2	99	44.660	ENSCHIG00000019916	APEX2	99	45.224	Capra_hircus
ENSEBUG00000015654	apex2	99	46.875	ENSTSYG00000005612	APEX2	99	46.875	Carlito_syrichta
ENSEBUG00000015654	apex2	99	44.186	ENSCPOG00000007265	APEX2	99	45.631	Cavia_porcellus
ENSEBUG00000015654	apex2	94	40.671	ENSCCAG00000025405	-	96	42.082	Cebus_capucinus
ENSEBUG00000015654	apex2	99	45.455	ENSCATG00000044854	APEX2	99	45.455	Cercocebus_atys
ENSEBUG00000015654	apex2	99	45.543	ENSCLAG00000017315	APEX2	99	45.543	Chinchilla_lanigera
ENSEBUG00000015654	apex2	99	45.261	ENSCSAG00000012124	APEX2	99	45.261	Chlorocebus_sabaeus
ENSEBUG00000015654	apex2	100	47.154	ENSCPBG00000016631	APEX2	99	47.773	Chrysemys_picta_bellii
ENSEBUG00000015654	apex2	100	43.426	ENSCSAVG00000006052	-	100	43.227	Ciona_savignyi
ENSEBUG00000015654	apex2	99	44.874	ENSCANG00000003053	APEX2	99	45.068	Colobus_angolensis_palliatus
ENSEBUG00000015654	apex2	99	43.023	ENSCGRG00001008132	Apex2	99	42.176	Cricetulus_griseus_chok1gshd
ENSEBUG00000015654	apex2	99	43.023	ENSCGRG00000009667	Apex2	87	55.140	Cricetulus_griseus_crigri
ENSEBUG00000015654	apex2	86	60.274	ENSCSEG00000019900	apex2	73	60.274	Cynoglossus_semilaevis
ENSEBUG00000015654	apex2	86	54.795	ENSCVAG00000021583	apex2	73	54.795	Cyprinodon_variegatus
ENSEBUG00000015654	apex2	85	64.615	ENSDARG00000008472	apex2	74	64.615	Danio_rerio
ENSEBUG00000015654	apex2	99	43.883	ENSDNOG00000038901	APEX2	99	44.101	Dasypus_novemcinctus
ENSEBUG00000015654	apex2	99	45.455	ENSEASG00005011694	APEX2	91	45.455	Equus_asinus_asinus
ENSEBUG00000015654	apex2	99	45.455	ENSECAG00000026921	APEX2	91	45.455	Equus_caballus
ENSEBUG00000015654	apex2	99	44.597	ENSEEUG00000013172	APEX2	99	45.187	Erinaceus_europaeus
ENSEBUG00000015654	apex2	84	66.129	ENSELUG00000021417	apex2	70	66.129	Esox_lucius
ENSEBUG00000015654	apex2	99	45.224	ENSFCAG00000021990	APEX2	99	45.614	Felis_catus
ENSEBUG00000015654	apex2	99	45.648	ENSFDAG00000008076	APEX2	92	54.091	Fukomys_damarensis
ENSEBUG00000015654	apex2	85	57.143	ENSFHEG00000021411	apex2	74	57.143	Fundulus_heteroclitus
ENSEBUG00000015654	apex2	59	60.309	ENSGMOG00000019681	apex2	76	60.309	Gadus_morhua
ENSEBUG00000015654	apex2	86	54.261	ENSGAFG00000005829	apex2	74	55.301	Gambusia_affinis
ENSEBUG00000015654	apex2	53	65.385	ENSGACG00000012307	apex2	65	64.516	Gasterosteus_aculeatus
ENSEBUG00000015654	apex2	88	56.098	ENSGAGG00000011520	APEX2	78	56.098	Gopherus_agassizii
ENSEBUG00000015654	apex2	99	45.648	ENSGGOG00000002056	APEX2	99	45.648	Gorilla_gorilla
ENSEBUG00000015654	apex2	100	46.067	ENSHBUG00000009938	apex2	99	46.067	Haplochromis_burtoni
ENSEBUG00000015654	apex2	99	44.874	ENSHGLG00000000273	APEX2	92	53.636	Heterocephalus_glaber_female
ENSEBUG00000015654	apex2	100	46.226	ENSHCOG00000010165	apex2	99	46.226	Hippocampus_comes
ENSEBUG00000015654	apex2	95	54.986	ENSIPUG00000000352	APEX2	79	54.986	Ictalurus_punctatus
ENSEBUG00000015654	apex2	99	46.139	ENSSTOG00000025121	APEX2	99	46.422	Ictidomys_tridecemlineatus
ENSEBUG00000015654	apex2	99	44.874	ENSJJAG00000019611	Apex2	92	55.399	Jaculus_jaculus
ENSEBUG00000015654	apex2	86	58.904	ENSKMAG00000006985	apex2	75	58.904	Kryptolebias_marmoratus
ENSEBUG00000015654	apex2	86	57.534	ENSLBEG00000012139	apex2	74	57.534	Labrus_bergylta
ENSEBUG00000015654	apex2	100	40.687	ENSLACG00000000865	APEX2	99	40.687	Latimeria_chalumnae
ENSEBUG00000015654	apex2	84	65.079	ENSLOCG00000014467	apex2	72	65.079	Lepisosteus_oculatus
ENSEBUG00000015654	apex2	99	43.822	ENSLAFG00000018312	APEX2	99	43.822	Loxodonta_africana
ENSEBUG00000015654	apex2	99	45.648	ENSMFAG00000002486	APEX2	99	45.648	Macaca_fascicularis
ENSEBUG00000015654	apex2	99	45.648	ENSMMUG00000008428	APEX2	99	45.648	Macaca_mulatta
ENSEBUG00000015654	apex2	99	45.648	ENSMNEG00000036783	APEX2	99	45.648	Macaca_nemestrina
ENSEBUG00000015654	apex2	99	45.455	ENSMLEG00000028208	APEX2	99	45.455	Mandrillus_leucophaeus
ENSEBUG00000015654	apex2	86	60.563	ENSMAMG00000024220	apex2	72	61.429	Mastacembelus_armatus
ENSEBUG00000015654	apex2	100	45.880	ENSMZEG00005026322	apex2	99	45.880	Maylandia_zebra
ENSEBUG00000015654	apex2	99	45.000	ENSMICG00000043181	APEX2	99	45.000	Microcebus_murinus
ENSEBUG00000015654	apex2	99	43.931	ENSMOCG00000004339	Apex2	87	57.212	Microtus_ochrogaster
ENSEBUG00000015654	apex2	85	58.571	ENSMMOG00000017340	apex2	86	54.545	Mola_mola
ENSEBUG00000015654	apex2	99	49.167	ENSMODG00000005341	APEX2	99	49.167	Monodelphis_domestica
ENSEBUG00000015654	apex2	90	54.444	ENSMALG00000014179	apex2	73	54.444	Monopterus_albus
ENSEBUG00000015654	apex2	99	44.788	MGP_CAROLIEiJ_G0033484	Apex2	99	49.064	Mus_caroli
ENSEBUG00000015654	apex2	99	44.788	ENSMUSG00000025269	Apex2	99	49.064	Mus_musculus
ENSEBUG00000015654	apex2	99	43.822	MGP_PahariEiJ_G0032023	Apex2	99	49.064	Mus_pahari
ENSEBUG00000015654	apex2	99	44.788	MGP_SPRETEiJ_G0034654	Apex2	99	49.064	Mus_spretus
ENSEBUG00000015654	apex2	99	45.543	ENSMPUG00000003293	APEX2	99	45.543	Mustela_putorius_furo
ENSEBUG00000015654	apex2	99	45.168	ENSMLUG00000004562	-	99	45.168	Myotis_lucifugus
ENSEBUG00000015654	apex2	99	45.401	ENSMLUG00000016298	-	99	45.401	Myotis_lucifugus
ENSEBUG00000015654	apex2	99	43.133	ENSNGAG00000013576	Apex2	99	43.133	Nannospalax_galili
ENSEBUG00000015654	apex2	85	61.429	ENSNBRG00000010099	apex2	74	61.429	Neolamprologus_brichardi
ENSEBUG00000015654	apex2	66	55.556	ENSNLEG00000032067	-	78	55.556	Nomascus_leucogenys
ENSEBUG00000015654	apex2	100	46.756	ENSONIG00000016881	apex2	99	46.756	Oreochromis_niloticus
ENSEBUG00000015654	apex2	86	59.167	ENSOANG00000000689	-	96	47.619	Ornithorhynchus_anatinus
ENSEBUG00000015654	apex2	99	39.122	ENSOCUG00000000570	APEX2	99	39.122	Oryctolagus_cuniculus
ENSEBUG00000015654	apex2	85	59.420	ENSORLG00000014053	apex2	74	59.420	Oryzias_latipes
ENSEBUG00000015654	apex2	85	59.420	ENSORLG00020013253	apex2	74	59.420	Oryzias_latipes_hni
ENSEBUG00000015654	apex2	85	59.420	ENSORLG00015007515	apex2	74	59.420	Oryzias_latipes_hsok
ENSEBUG00000015654	apex2	100	44.604	ENSOMEG00000003655	apex2	99	44.604	Oryzias_melastigma
ENSEBUG00000015654	apex2	99	45.946	ENSOGAG00000007797	APEX2	99	45.946	Otolemur_garnettii
ENSEBUG00000015654	apex2	99	44.466	ENSOARG00000005742	APEX2	99	45.029	Ovis_aries
ENSEBUG00000015654	apex2	99	45.648	ENSPPAG00000035747	APEX2	99	45.648	Pan_paniscus
ENSEBUG00000015654	apex2	99	45.331	ENSPPRG00000002440	APEX2	99	45.331	Panthera_pardus
ENSEBUG00000015654	apex2	99	45.331	ENSPTIG00000021651	APEX2	99	45.331	Panthera_tigris_altaica
ENSEBUG00000015654	apex2	99	45.841	ENSPTRG00000021946	APEX2	99	45.841	Pan_troglodytes
ENSEBUG00000015654	apex2	99	45.455	ENSPANG00000003595	APEX2	99	45.455	Papio_anubis
ENSEBUG00000015654	apex2	91	54.802	ENSPKIG00000007752	apex2	82	39.509	Paramormyrops_kingsleyae
ENSEBUG00000015654	apex2	100	44.224	ENSPMGG00000009151	apex2	99	44.224	Periophthalmus_magnuspinnatus
ENSEBUG00000015654	apex2	99	42.500	ENSPEMG00000016475	Apex2	98	50.000	Peromyscus_maniculatus_bairdii
ENSEBUG00000015654	apex2	99	49.485	ENSPCIG00000007633	APEX2	98	50.312	Phascolarctos_cinereus
ENSEBUG00000015654	apex2	86	56.164	ENSPFOG00000000408	apex2	74	56.164	Poecilia_formosa
ENSEBUG00000015654	apex2	87	59.504	ENSPLAG00000023814	apex2	74	56.164	Poecilia_latipinna
ENSEBUG00000015654	apex2	86	56.164	ENSPMEG00000023222	apex2	74	56.164	Poecilia_mexicana
ENSEBUG00000015654	apex2	99	45.192	ENSPPYG00000020388	APEX2	99	46.035	Pongo_abelii
ENSEBUG00000015654	apex2	99	45.211	ENSPCOG00000016083	APEX2	99	45.211	Propithecus_coquereli
ENSEBUG00000015654	apex2	80	56.338	ENSPVAG00000007851	APEX2	99	44.635	Pteropus_vampyrus
ENSEBUG00000015654	apex2	86	58.904	ENSPNYG00000015698	apex2	74	58.904	Pundamilia_nyererei
ENSEBUG00000015654	apex2	97	54.155	ENSPNAG00000011666	apex2	79	54.155	Pygocentrus_nattereri
ENSEBUG00000015654	apex2	99	43.411	ENSRNOG00000000166	Apex2	99	43.411	Rattus_norvegicus
ENSEBUG00000015654	apex2	99	45.455	ENSRBIG00000036500	APEX2	99	45.648	Rhinopithecus_bieti
ENSEBUG00000015654	apex2	99	45.455	ENSRROG00000032674	APEX2	99	45.455	Rhinopithecus_roxellana
ENSEBUG00000015654	apex2	94	38.806	ENSSBOG00000003489	-	96	38.462	Saimiri_boliviensis_boliviensis
ENSEBUG00000015654	apex2	99	46.035	ENSSBOG00000030500	-	99	46.615	Saimiri_boliviensis_boliviensis
ENSEBUG00000015654	apex2	99	50.936	ENSSHAG00000007846	APEX2	99	50.936	Sarcophilus_harrisii
ENSEBUG00000015654	apex2	87	64.062	ENSSFOG00015010354	apex2	99	48.851	Scleropages_formosus
ENSEBUG00000015654	apex2	84	66.667	ENSSMAG00000012753	apex2	73	66.667	Scophthalmus_maximus
ENSEBUG00000015654	apex2	86	58.108	ENSSDUG00000022892	apex2	76	58.108	Seriola_dumerili
ENSEBUG00000015654	apex2	100	45.880	ENSSLDG00000024347	apex2	99	46.382	Seriola_lalandi_dorsalis
ENSEBUG00000015654	apex2	99	44.681	ENSSARG00000010297	APEX2	99	45.068	Sorex_araneus
ENSEBUG00000015654	apex2	86	60.274	ENSSPAG00000016279	apex2	74	60.274	Stegastes_partitus
ENSEBUG00000015654	apex2	99	45.136	ENSSSCG00000012348	-	99	45.136	Sus_scrofa
ENSEBUG00000015654	apex2	99	60.563	ENSTRUG00000015660	apex2	87	60.563	Takifugu_rubripes
ENSEBUG00000015654	apex2	100	40.192	ENSTNIG00000003725	apex2	99	45.742	Tetraodon_nigroviridis
ENSEBUG00000015654	apex2	90	47.732	ENSTBEG00000010520	APEX2	99	47.732	Tupaia_belangeri
ENSEBUG00000015654	apex2	99	45.068	ENSUAMG00000004720	APEX2	99	45.068	Ursus_americanus
ENSEBUG00000015654	apex2	99	42.248	ENSUMAG00000002892	APEX2	99	42.829	Ursus_maritimus
ENSEBUG00000015654	apex2	99	44.359	ENSVVUG00000005989	APEX2	99	44.359	Vulpes_vulpes
ENSEBUG00000015654	apex2	99	44.186	ENSXETG00000022026	apex2	98	43.403	Xenopus_tropicalis
ENSEBUG00000015654	apex2	91	55.331	ENSXMAG00000025740	apex2	78	55.331	Xiphophorus_maculatus