EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015686 (Gene tree)
Gene ID: -
Gene Symbol: utp3
Alias: zgc:92127
Full Name: UTP3%2C small subunit (SSU) processome component%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 79775 bases
Position: chrFYBX02007623.1:802044-881818
Accession: ZDB-GENE-040912-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025504	Sas10_Utp3	PF04000.15	4.7e-11	1	1
ENSEBUP00000025472	Sas10_Utp3	PF04000.15	5e-11	1	1
ENSEBUP00000025489	Sas10_Utp3	PF04000.15	5e-11	1	1
ENSEBUP00000025523	Sas10_Utp3	PF04000.15	2.6e-10	1	1
ENSEBUP00000025443	Sas10_Utp3	PF04000.15	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026048	-	2457	-	ENSEBUP00000025472	444 (aa)	-	-
ENSEBUT00000026066	-	2090	-	ENSEBUP00000025489	444 (aa)	-	-
ENSEBUT00000026019	-	1589	-	ENSEBUP00000025443	492 (aa)	-	-
ENSEBUT00000026099	-	4139	-	ENSEBUP00000025523	474 (aa)	-	-
ENSEBUT00000026081	-	4732	-	ENSEBUP00000025504	420 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015686	utp3	76	40.160	ENSG00000132467	UTP3	93	38.511	Homo_sapiens
ENSEBUG00000015686	utp3	97	39.873	ENSAPOG00000018006	utp3	97	40.748	Acanthochromis_polyacanthus
ENSEBUG00000015686	utp3	76	40.653	ENSAMEG00000019540	UTP3	95	37.500	Ailuropoda_melanoleuca
ENSEBUG00000015686	utp3	96	41.151	ENSACIG00000010913	utp3	96	40.773	Amphilophus_citrinellus
ENSEBUG00000015686	utp3	96	40.764	ENSAOCG00000016134	utp3	96	40.756	Amphiprion_ocellaris
ENSEBUG00000015686	utp3	96	41.189	ENSAPEG00000003914	utp3	96	41.102	Amphiprion_percula
ENSEBUG00000015686	utp3	97	40.126	ENSATEG00000024940	utp3	100	40.000	Anabas_testudineus
ENSEBUG00000015686	utp3	77	39.221	ENSACAG00000012860	UTP3	99	36.581	Anolis_carolinensis
ENSEBUG00000015686	utp3	76	40.299	ENSANAG00000031723	UTP3	93	36.864	Aotus_nancymaae
ENSEBUG00000015686	utp3	96	42.316	ENSACLG00000015170	utp3	96	43.129	Astatotilapia_calliptera
ENSEBUG00000015686	utp3	80	39.846	ENSAMXG00000032941	utp3	94	39.744	Astyanax_mexicanus
ENSEBUG00000015686	utp3	99	37.376	ENSBTAG00000009310	UTP3	99	37.177	Bos_taurus
ENSEBUG00000015686	utp3	76	41.317	ENSCJAG00000042824	UTP3	93	39.030	Callithrix_jacchus
ENSEBUG00000015686	utp3	99	36.821	ENSCAFG00000002913	UTP3	99	36.821	Canis_familiaris
ENSEBUG00000015686	utp3	99	36.196	ENSCAFG00020027071	UTP3	99	36.605	Canis_lupus_dingo
ENSEBUG00000015686	utp3	99	37.751	ENSCHIG00000002276	UTP3	99	37.349	Capra_hircus
ENSEBUG00000015686	utp3	93	38.178	ENSCPOG00000005869	UTP3	93	39.655	Cavia_porcellus
ENSEBUG00000015686	utp3	76	40.419	ENSCCAG00000032341	UTP3	93	37.447	Cebus_capucinus
ENSEBUG00000015686	utp3	93	38.641	ENSCATG00000016403	UTP3	93	38.065	Cercocebus_atys
ENSEBUG00000015686	utp3	85	40.849	ENSCLAG00000017606	UTP3	93	38.478	Chinchilla_lanigera
ENSEBUG00000015686	utp3	76	40.426	ENSCSAG00000000420	UTP3	93	37.580	Chlorocebus_sabaeus
ENSEBUG00000015686	utp3	76	43.491	ENSCPBG00000019489	UTP3	95	39.666	Chrysemys_picta_bellii
ENSEBUG00000015686	utp3	94	32.347	ENSCING00000007582	-	95	33.548	Ciona_intestinalis
ENSEBUG00000015686	utp3	100	32.427	ENSCSAVG00000010608	-	100	32.845	Ciona_savignyi
ENSEBUG00000015686	utp3	76	41.114	ENSCANG00000016915	UTP3	99	38.171	Colobus_angolensis_palliatus
ENSEBUG00000015686	utp3	93	39.103	ENSCGRG00001001299	Utp3	93	39.103	Cricetulus_griseus_chok1gshd
ENSEBUG00000015686	utp3	93	39.103	ENSCGRG00000019120	Utp3	93	39.103	Cricetulus_griseus_crigri
ENSEBUG00000015686	utp3	78	35.772	ENSCSEG00000021698	utp3	94	34.933	Cynoglossus_semilaevis
ENSEBUG00000015686	utp3	96	40.773	ENSCVAG00000011971	utp3	96	41.542	Cyprinodon_variegatus
ENSEBUG00000015686	utp3	99	38.797	ENSDARG00000056720	utp3	99	39.669	Danio_rerio
ENSEBUG00000015686	utp3	100	36.832	ENSDNOG00000002962	UTP3	99	36.149	Dasypus_novemcinctus
ENSEBUG00000015686	utp3	97	38.333	ENSDORG00000023913	Utp3	93	38.511	Dipodomys_ordii
ENSEBUG00000015686	utp3	78	31.551	FBgn0029755	Sas10	91	30.353	Drosophila_melanogaster
ENSEBUG00000015686	utp3	100	36.965	ENSEASG00005016702	UTP3	99	36.381	Equus_asinus_asinus
ENSEBUG00000015686	utp3	100	36.965	ENSECAG00000005387	UTP3	99	36.770	Equus_caballus
ENSEBUG00000015686	utp3	99	40.825	ENSELUG00000001527	utp3	99	43.033	Esox_lucius
ENSEBUG00000015686	utp3	97	37.298	ENSFCAG00000007268	UTP3	95	37.860	Felis_catus
ENSEBUG00000015686	utp3	80	38.293	ENSFALG00000014560	UTP3	79	37.621	Ficedula_albicollis
ENSEBUG00000015686	utp3	93	39.254	ENSFHEG00000018565	utp3	86	40.132	Fundulus_heteroclitus
ENSEBUG00000015686	utp3	85	38.293	ENSGMOG00000001824	utp3	99	38.107	Gadus_morhua
ENSEBUG00000015686	utp3	79	39.196	ENSGALG00000047103	UTP3	73	40.299	Gallus_gallus
ENSEBUG00000015686	utp3	96	40.213	ENSGAFG00000012330	utp3	96	40.213	Gambusia_affinis
ENSEBUG00000015686	utp3	78	38.564	ENSGACG00000007417	utp3	99	36.300	Gasterosteus_aculeatus
ENSEBUG00000015686	utp3	94	40.426	ENSGAGG00000003975	UTP3	93	40.552	Gopherus_agassizii
ENSEBUG00000015686	utp3	76	40.426	ENSGGOG00000025335	UTP3	93	38.511	Gorilla_gorilla
ENSEBUG00000015686	utp3	96	42.316	ENSHBUG00000003276	utp3	96	43.129	Haplochromis_burtoni
ENSEBUG00000015686	utp3	97	37.736	ENSHGLG00000020163	UTP3	99	37.980	Heterocephalus_glaber_female
ENSEBUG00000015686	utp3	97	37.736	ENSHGLG00100020125	UTP3	99	37.980	Heterocephalus_glaber_male
ENSEBUG00000015686	utp3	80	40.310	ENSHCOG00000020540	utp3	96	37.808	Hippocampus_comes
ENSEBUG00000015686	utp3	100	38.821	ENSIPUG00000014510	Utp3	100	39.069	Ictalurus_punctatus
ENSEBUG00000015686	utp3	93	37.716	ENSSTOG00000029126	UTP3	93	37.815	Ictidomys_tridecemlineatus
ENSEBUG00000015686	utp3	85	39.730	ENSJJAG00000014891	Utp3	95	37.866	Jaculus_jaculus
ENSEBUG00000015686	utp3	97	40.710	ENSKMAG00000004879	utp3	97	41.164	Kryptolebias_marmoratus
ENSEBUG00000015686	utp3	96	39.400	ENSLBEG00000024055	utp3	96	40.678	Labrus_bergylta
ENSEBUG00000015686	utp3	100	39.010	ENSLACG00000009975	utp3	100	39.723	Latimeria_chalumnae
ENSEBUG00000015686	utp3	84	38.983	ENSLOCG00000001449	utp3	99	40.576	Lepisosteus_oculatus
ENSEBUG00000015686	utp3	95	34.475	ENSLAFG00000017017	UTP3	93	35.897	Loxodonta_africana
ENSEBUG00000015686	utp3	76	40.691	ENSMFAG00000013579	UTP3	93	38.248	Macaca_fascicularis
ENSEBUG00000015686	utp3	76	40.691	ENSMMUG00000014229	UTP3	93	38.034	Macaca_mulatta
ENSEBUG00000015686	utp3	76	40.691	ENSMNEG00000005112	UTP3	93	38.248	Macaca_nemestrina
ENSEBUG00000015686	utp3	76	40.691	ENSMLEG00000022236	UTP3	93	38.248	Mandrillus_leucophaeus
ENSEBUG00000015686	utp3	100	40.241	ENSMAMG00000015467	utp3	100	39.715	Mastacembelus_armatus
ENSEBUG00000015686	utp3	96	42.316	ENSMZEG00005014455	utp3	96	43.129	Maylandia_zebra
ENSEBUG00000015686	utp3	58	36.237	ENSMGAG00000009998	UTP3	89	34.615	Meleagris_gallopavo
ENSEBUG00000015686	utp3	93	37.473	ENSMAUG00000017935	Utp3	93	37.908	Mesocricetus_auratus
ENSEBUG00000015686	utp3	93	38.362	ENSMOCG00000005434	Utp3	93	38.806	Microtus_ochrogaster
ENSEBUG00000015686	utp3	97	39.278	ENSMMOG00000010804	utp3	97	38.429	Mola_mola
ENSEBUG00000015686	utp3	93	38.397	ENSMODG00000019084	UTP3	96	40.042	Monodelphis_domestica
ENSEBUG00000015686	utp3	96	40.795	ENSMALG00000003443	utp3	96	41.545	Monopterus_albus
ENSEBUG00000015686	utp3	93	37.391	MGP_CAROLIEiJ_G0027375	Utp3	93	38.248	Mus_caroli
ENSEBUG00000015686	utp3	93	38.043	ENSMUSG00000070697	Utp3	93	38.229	Mus_musculus
ENSEBUG00000015686	utp3	63	36.452	MGP_PahariEiJ_G0017153	-	61	36.593	Mus_pahari
ENSEBUG00000015686	utp3	93	37.609	MGP_SPRETEiJ_G0028372	Utp3	93	38.495	Mus_spretus
ENSEBUG00000015686	utp3	97	38.008	ENSMPUG00000019074	UTP3	95	37.372	Mustela_putorius_furo
ENSEBUG00000015686	utp3	85	39.353	ENSMLUG00000003722	UTP3	93	37.554	Myotis_lucifugus
ENSEBUG00000015686	utp3	93	37.446	ENSNGAG00000012521	Utp3	92	37.554	Nannospalax_galili
ENSEBUG00000015686	utp3	96	41.909	ENSNBRG00000020374	utp3	96	43.340	Neolamprologus_brichardi
ENSEBUG00000015686	utp3	76	40.476	ENSNLEG00000018563	UTP3	93	38.559	Nomascus_leucogenys
ENSEBUG00000015686	utp3	93	38.627	ENSODEG00000018723	UTP3	92	38.841	Octodon_degus
ENSEBUG00000015686	utp3	96	42.797	ENSONIG00000003918	utp3	96	43.158	Oreochromis_niloticus
ENSEBUG00000015686	utp3	73	61.905	ENSOANG00000013694	-	98	61.905	Ornithorhynchus_anatinus
ENSEBUG00000015686	utp3	94	36.774	ENSOCUG00000010003	UTP3	93	36.559	Oryctolagus_cuniculus
ENSEBUG00000015686	utp3	96	43.038	ENSORLG00000004019	utp3	96	42.380	Oryzias_latipes
ENSEBUG00000015686	utp3	96	43.644	ENSORLG00020020306	utp3	96	42.300	Oryzias_latipes_hni
ENSEBUG00000015686	utp3	96	43.038	ENSORLG00015016052	utp3	96	42.316	Oryzias_latipes_hsok
ENSEBUG00000015686	utp3	96	41.962	ENSOMEG00000022073	utp3	96	41.423	Oryzias_melastigma
ENSEBUG00000015686	utp3	100	35.771	ENSOGAG00000012878	UTP3	99	36.078	Otolemur_garnettii
ENSEBUG00000015686	utp3	99	37.751	ENSOARG00000007800	UTP3	99	37.349	Ovis_aries
ENSEBUG00000015686	utp3	76	40.160	ENSPPAG00000019684	UTP3	93	38.723	Pan_paniscus
ENSEBUG00000015686	utp3	97	37.551	ENSPPRG00000015468	UTP3	95	36.810	Panthera_pardus
ENSEBUG00000015686	utp3	97	37.602	ENSPTIG00000006703	UTP3	95	36.810	Panthera_tigris_altaica
ENSEBUG00000015686	utp3	93	38.065	ENSPANG00000008263	UTP3	93	38.462	Papio_anubis
ENSEBUG00000015686	utp3	99	38.017	ENSPKIG00000012883	utp3	99	38.683	Paramormyrops_kingsleyae
ENSEBUG00000015686	utp3	76	42.690	ENSPSIG00000000105	UTP3	60	41.131	Pelodiscus_sinensis
ENSEBUG00000015686	utp3	97	36.798	ENSPMGG00000023527	utp3	98	37.581	Periophthalmus_magnuspinnatus
ENSEBUG00000015686	utp3	97	38.622	ENSPEMG00000019223	Utp3	99	37.751	Peromyscus_maniculatus_bairdii
ENSEBUG00000015686	utp3	96	40.678	ENSPFOG00000014528	utp3	96	40.552	Poecilia_formosa
ENSEBUG00000015686	utp3	96	40.506	ENSPLAG00000005600	utp3	96	40.381	Poecilia_latipinna
ENSEBUG00000015686	utp3	96	40.466	ENSPMEG00000019359	utp3	96	40.340	Poecilia_mexicana
ENSEBUG00000015686	utp3	96	40.084	ENSPREG00000005341	utp3	99	38.956	Poecilia_reticulata
ENSEBUG00000015686	utp3	76	41.317	ENSPPYG00000014810	UTP3	93	39.149	Pongo_abelii
ENSEBUG00000015686	utp3	100	36.523	ENSPCAG00000012879	UTP3	99	35.603	Procavia_capensis
ENSEBUG00000015686	utp3	100	35.857	ENSPVAG00000004333	UTP3	99	37.302	Pteropus_vampyrus
ENSEBUG00000015686	utp3	96	40.215	ENSPNYG00000017771	utp3	96	39.262	Pundamilia_nyererei
ENSEBUG00000015686	utp3	99	38.821	ENSPNAG00000000182	utp3	99	38.821	Pygocentrus_nattereri
ENSEBUG00000015686	utp3	93	38.661	ENSRNOG00000003599	Utp3	93	38.661	Rattus_norvegicus
ENSEBUG00000015686	utp3	93	38.641	ENSRBIG00000030025	UTP3	93	38.065	Rhinopithecus_bieti
ENSEBUG00000015686	utp3	93	38.641	ENSRROG00000006709	UTP3	93	38.065	Rhinopithecus_roxellana
ENSEBUG00000015686	utp3	76	40.719	ENSSBOG00000019914	UTP3	99	37.059	Saimiri_boliviensis_boliviensis
ENSEBUG00000015686	utp3	92	38.961	ENSSHAG00000018226	UTP3	94	40.299	Sarcophilus_harrisii
ENSEBUG00000015686	utp3	100	39.794	ENSSFOG00015007775	utp3	100	40.373	Scleropages_formosus
ENSEBUG00000015686	utp3	97	40.928	ENSSMAG00000015156	utp3	97	40.461	Scophthalmus_maximus
ENSEBUG00000015686	utp3	96	41.649	ENSSDUG00000014843	utp3	96	41.649	Seriola_dumerili
ENSEBUG00000015686	utp3	80	35.556	ENSSPUG00000007404	UTP3	98	33.936	Sphenodon_punctatus
ENSEBUG00000015686	utp3	96	40.928	ENSSPAG00000007106	utp3	96	40.966	Stegastes_partitus
ENSEBUG00000015686	utp3	93	39.241	ENSSSCG00000028466	UTP3	93	39.103	Sus_scrofa
ENSEBUG00000015686	utp3	94	39.159	ENSTRUG00000014591	utp3	100	39.130	Takifugu_rubripes
ENSEBUG00000015686	utp3	99	37.370	ENSTNIG00000014783	utp3	99	37.238	Tetraodon_nigroviridis
ENSEBUG00000015686	utp3	100	36.667	ENSTTRG00000008390	UTP3	99	37.747	Tursiops_truncatus
ENSEBUG00000015686	utp3	93	38.380	ENSUAMG00000008914	UTP3	93	38.166	Ursus_americanus
ENSEBUG00000015686	utp3	76	41.246	ENSUMAG00000003743	UTP3	93	38.380	Ursus_maritimus
ENSEBUG00000015686	utp3	54	35.145	ENSVVUG00000004285	UTP3	78	34.770	Vulpes_vulpes
ENSEBUG00000015686	utp3	99	39.331	ENSXETG00000026859	utp3	98	38.737	Xenopus_tropicalis
ENSEBUG00000015686	utp3	96	39.915	ENSXMAG00000017071	utp3	96	39.490	Xiphophorus_maculatus