EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 93245 bases
Position: chrFYBX02010683.1:3400585-3493829
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025605	HRDC	PF00570.23	2.5e-10	1	1
ENSEBUP00000025566	HRDC	PF00570.23	2.7e-10	1	1
ENSEBUP00000025579	HRDC	PF00570.23	2.8e-10	1	1
ENSEBUP00000025566	DEAD	PF00270.29	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026141	-	2067	-	ENSEBUP00000025566	688 (aa)	-	-
ENSEBUT00000026181	-	4563	-	ENSEBUP00000025605	652 (aa)	-	-
ENSEBUT00000026155	-	4701	-	ENSEBUP00000025579	698 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015743	-	59	37.705	ENSEBUG00000011061	recql5	84	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015743	-	89	56.361	ENSAPLG00000006878	BLM	52	56.640	Anas_platyrhynchos
ENSEBUG00000015743	-	85	41.063	WBGene00001865	him-6	61	41.063	Caenorhabditis_elegans
ENSEBUG00000015743	-	94	51.017	ENSCAFG00020016111	BLM	71	58.389	Canis_lupus_dingo
ENSEBUG00000015743	-	85	58.725	ENSCATG00000040609	BLM	61	67.755	Cercocebus_atys
ENSEBUG00000015743	-	99	51.364	ENSCPBG00000025000	BLM	59	57.797	Chrysemys_picta_bellii
ENSEBUG00000015743	-	58	40.351	ENSCING00000021036	-	70	40.351	Ciona_intestinalis
ENSEBUG00000015743	-	70	38.046	ENSCSAVG00000007521	-	66	41.985	Ciona_savignyi
ENSEBUG00000015743	-	99	49.697	ENSDORG00000011033	Blm	57	58.545	Dipodomys_ordii
ENSEBUG00000015743	-	53	49.731	ENSGMOG00000010772	-	84	49.731	Gadus_morhua
ENSEBUG00000015743	-	99	49.849	ENSGMOG00000016431	blm	69	52.932	Gadus_morhua
ENSEBUG00000015743	-	53	50.811	ENSGMOG00000010827	-	85	50.811	Gadus_morhua
ENSEBUG00000015743	-	53	45.213	ENSGMOG00000012988	-	87	45.213	Gadus_morhua
ENSEBUG00000015743	-	53	44.444	ENSGMOG00000013063	-	86	44.444	Gadus_morhua
ENSEBUG00000015743	-	54	49.866	ENSGMOG00000010761	-	87	49.866	Gadus_morhua
ENSEBUG00000015743	-	90	53.311	ENSGACG00000010863	blm	91	61.123	Gasterosteus_aculeatus
ENSEBUG00000015743	-	81	57.989	ENSGAGG00000005383	BLM	57	58.018	Gopherus_agassizii
ENSEBUG00000015743	-	99	50.000	ENSGGOG00000007710	BLM	61	67.206	Gorilla_gorilla
ENSEBUG00000015743	-	99	53.333	ENSHCOG00000011455	blm	62	59.801	Hippocampus_comes
ENSEBUG00000015743	-	97	50.786	ENSIPUG00000000529	blm	52	57.336	Ictalurus_punctatus
ENSEBUG00000015743	-	81	69.650	ENSJJAG00000016322	Blm	50	69.650	Jaculus_jaculus
ENSEBUG00000015743	-	84	58.834	ENSLBEG00000018729	blm	68	58.834	Labrus_bergylta
ENSEBUG00000015743	-	85	58.557	ENSMFAG00000042982	BLM	61	68.163	Macaca_fascicularis
ENSEBUG00000015743	-	85	59.060	ENSMMUG00000019526	BLM	61	68.163	Macaca_mulatta
ENSEBUG00000015743	-	85	59.060	ENSMNEG00000031251	BLM	61	67.755	Macaca_nemestrina
ENSEBUG00000015743	-	88	47.920	ENSMGAG00000010473	BLM	91	49.462	Meleagris_gallopavo
ENSEBUG00000015743	-	99	50.373	ENSNLEG00000012087	BLM	58	53.794	Nomascus_leucogenys
ENSEBUG00000015743	-	99	46.364	ENSODEG00000015373	BLM	56	54.469	Octodon_degus
ENSEBUG00000015743	-	99	49.701	ENSOANG00000009316	-	79	57.541	Ornithorhynchus_anatinus
ENSEBUG00000015743	-	99	52.128	ENSORLG00015018640	blm	60	58.685	Oryzias_latipes_hsok
ENSEBUG00000015743	-	85	58.893	ENSPANG00000018572	BLM	61	68.163	Papio_anubis
ENSEBUG00000015743	-	82	55.970	ENSPSIG00000009792	BLM	99	55.676	Pelodiscus_sinensis
ENSEBUG00000015743	-	90	53.135	ENSPMGG00000006629	blm	65	58.108	Periophthalmus_magnuspinnatus
ENSEBUG00000015743	-	85	61.681	ENSPMAG00000000445	blm	80	62.248	Petromyzon_marinus
ENSEBUG00000015743	-	85	59.060	ENSRBIG00000029656	BLM	61	67.611	Rhinopithecus_bieti
ENSEBUG00000015743	-	85	59.060	ENSRROG00000037871	BLM	61	67.611	Rhinopithecus_roxellana
ENSEBUG00000015743	-	94	49.842	ENSSPUG00000000013	BLM	53	56.689	Sphenodon_punctatus
ENSEBUG00000015743	-	88	50.965	ENSTGUG00000009959	-	50	57.317	Taeniopygia_guttata
ENSEBUG00000015743	-	99	50.152	ENSUMAG00000009105	BLM	78	58.418	Ursus_maritimus