EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015780 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 14105 bases
Position: chrFYBX02009807.1:2924248-2938352
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025607	SBDS	PF01172.18	1.3e-17	1	1
ENSEBUP00000025607	SBDS_C	PF09377.10	2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026183	-	675	-	ENSEBUP00000025607	224 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015780	sbds	74	52.976	ENSEBUG00000009167	-	72	52.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015780	sbds	100	57.940	ENSG00000126524	SBDS	93	57.940	Homo_sapiens
ENSEBUG00000015780	sbds	99	59.052	ENSAPOG00000014285	sbds	93	59.052	Acanthochromis_polyacanthus
ENSEBUG00000015780	sbds	100	57.940	ENSAMEG00000018167	SBDS	93	57.940	Ailuropoda_melanoleuca
ENSEBUG00000015780	sbds	99	59.574	ENSACIG00000007308	sbds	93	59.574	Amphilophus_citrinellus
ENSEBUG00000015780	sbds	99	59.052	ENSAOCG00000016770	sbds	93	59.052	Amphiprion_ocellaris
ENSEBUG00000015780	sbds	99	59.483	ENSAPEG00000015897	sbds	93	59.483	Amphiprion_percula
ENSEBUG00000015780	sbds	99	58.621	ENSATEG00000006901	sbds	93	58.621	Anabas_testudineus
ENSEBUG00000015780	sbds	92	63.768	ENSANAG00000037501	-	100	63.768	Aotus_nancymaae
ENSEBUG00000015780	sbds	83	62.366	ENSANAG00000024342	-	81	62.366	Aotus_nancymaae
ENSEBUG00000015780	sbds	99	59.914	ENSACLG00000018750	sbds	93	59.914	Astatotilapia_calliptera
ENSEBUG00000015780	sbds	100	59.227	ENSAMXG00000005361	sbds	93	59.227	Astyanax_mexicanus
ENSEBUG00000015780	sbds	100	58.798	ENSBTAG00000004051	SBDS	93	58.798	Bos_taurus
ENSEBUG00000015780	sbds	92	50.242	WBGene00021063	sbds-1	82	50.242	Caenorhabditis_elegans
ENSEBUG00000015780	sbds	92	64.251	ENSCJAG00000041007	SBDS	93	58.369	Callithrix_jacchus
ENSEBUG00000015780	sbds	95	62.736	ENSCAFG00000010797	SBDS	84	62.736	Canis_familiaris
ENSEBUG00000015780	sbds	92	63.768	ENSCAFG00020005357	SBDS	93	57.940	Canis_lupus_dingo
ENSEBUG00000015780	sbds	100	58.369	ENSCHIG00000026854	SBDS	93	58.369	Capra_hircus
ENSEBUG00000015780	sbds	92	63.768	ENSTSYG00000033822	SBDS	93	57.940	Carlito_syrichta
ENSEBUG00000015780	sbds	73	61.585	ENSCAPG00000006634	SBDS	100	61.585	Cavia_aperea
ENSEBUG00000015780	sbds	100	58.798	ENSCPOG00000036143	SBDS	93	58.798	Cavia_porcellus
ENSEBUG00000015780	sbds	100	57.940	ENSCCAG00000020671	SBDS	93	57.940	Cebus_capucinus
ENSEBUG00000015780	sbds	92	63.768	ENSCATG00000039026	SBDS	93	57.940	Cercocebus_atys
ENSEBUG00000015780	sbds	97	42.202	ENSCLAG00000002113	-	84	42.009	Chinchilla_lanigera
ENSEBUG00000015780	sbds	100	59.227	ENSCLAG00000005721	-	93	59.227	Chinchilla_lanigera
ENSEBUG00000015780	sbds	92	63.768	ENSCSAG00000018275	SBDS	93	57.940	Chlorocebus_sabaeus
ENSEBUG00000015780	sbds	100	54.506	ENSCHOG00000003795	SBDS	93	54.506	Choloepus_hoffmanni
ENSEBUG00000015780	sbds	100	60.086	ENSCPBG00000014893	SBDS	93	60.086	Chrysemys_picta_bellii
ENSEBUG00000015780	sbds	92	56.731	ENSCSAVG00000011811	-	83	56.731	Ciona_savignyi
ENSEBUG00000015780	sbds	92	63.285	ENSCANG00000032368	SBDS	93	57.511	Colobus_angolensis_palliatus
ENSEBUG00000015780	sbds	73	60.976	ENSCGRG00001019886	Sbds	100	60.976	Cricetulus_griseus_chok1gshd
ENSEBUG00000015780	sbds	92	64.251	ENSCGRG00000009211	Sbds	100	64.251	Cricetulus_griseus_crigri
ENSEBUG00000015780	sbds	99	56.897	ENSCSEG00000005798	sbds	93	56.897	Cynoglossus_semilaevis
ENSEBUG00000015780	sbds	99	59.052	ENSCVAG00000001053	sbds	93	59.052	Cyprinodon_variegatus
ENSEBUG00000015780	sbds	100	57.940	ENSDARG00000027803	sbds	93	57.940	Danio_rerio
ENSEBUG00000015780	sbds	100	57.511	ENSDNOG00000041174	SBDS	93	57.511	Dasypus_novemcinctus
ENSEBUG00000015780	sbds	100	60.086	ENSDORG00000026218	Sbds	93	60.086	Dipodomys_ordii
ENSEBUG00000015780	sbds	90	46.948	FBgn0035714	CG8549	92	46.983	Drosophila_melanogaster
ENSEBUG00000015780	sbds	100	57.940	ENSEASG00005008821	SBDS	93	57.940	Equus_asinus_asinus
ENSEBUG00000015780	sbds	100	57.940	ENSECAG00000008202	SBDS	93	57.940	Equus_caballus
ENSEBUG00000015780	sbds	54	57.377	ENSEEUG00000004768	SBDS	59	57.377	Erinaceus_europaeus
ENSEBUG00000015780	sbds	100	59.227	ENSELUG00000008382	sbds	93	59.227	Esox_lucius
ENSEBUG00000015780	sbds	100	57.940	ENSFCAG00000022142	SBDS	93	57.940	Felis_catus
ENSEBUG00000015780	sbds	100	60.944	ENSFALG00000013808	SBDS	93	60.944	Ficedula_albicollis
ENSEBUG00000015780	sbds	100	58.798	ENSFDAG00000018947	-	93	58.798	Fukomys_damarensis
ENSEBUG00000015780	sbds	99	59.483	ENSFHEG00000000708	sbds	93	59.483	Fundulus_heteroclitus
ENSEBUG00000015780	sbds	100	58.798	ENSGMOG00000018356	sbds	92	58.798	Gadus_morhua
ENSEBUG00000015780	sbds	100	59.227	ENSGALG00000027989	SBDS	93	59.227	Gallus_gallus
ENSEBUG00000015780	sbds	92	66.019	ENSGAFG00000014204	sbds	90	66.019	Gambusia_affinis
ENSEBUG00000015780	sbds	99	57.328	ENSGACG00000012697	sbds	93	57.328	Gasterosteus_aculeatus
ENSEBUG00000015780	sbds	92	65.217	ENSGAGG00000022402	SBDS	97	65.217	Gopherus_agassizii
ENSEBUG00000015780	sbds	100	42.489	ENSGGOG00000040023	-	89	42.489	Gorilla_gorilla
ENSEBUG00000015780	sbds	99	59.914	ENSHBUG00000002660	sbds	93	59.914	Haplochromis_burtoni
ENSEBUG00000015780	sbds	100	57.511	ENSHGLG00000009671	SBDS	93	57.511	Heterocephalus_glaber_female
ENSEBUG00000015780	sbds	100	57.511	ENSHGLG00100011332	SBDS	93	57.511	Heterocephalus_glaber_male
ENSEBUG00000015780	sbds	92	63.107	ENSHCOG00000018606	sbds	83	63.107	Hippocampus_comes
ENSEBUG00000015780	sbds	100	58.798	ENSIPUG00000006536	sbds	93	58.798	Ictalurus_punctatus
ENSEBUG00000015780	sbds	92	43.689	ENSJJAG00000003934	-	81	43.396	Jaculus_jaculus
ENSEBUG00000015780	sbds	92	65.217	ENSJJAG00000012033	-	83	65.217	Jaculus_jaculus
ENSEBUG00000015780	sbds	92	65.534	ENSKMAG00000018542	sbds	83	65.534	Kryptolebias_marmoratus
ENSEBUG00000015780	sbds	99	59.052	ENSLBEG00000016687	sbds	93	59.052	Labrus_bergylta
ENSEBUG00000015780	sbds	100	50.000	ENSLACG00000018916	SBDS	93	50.000	Latimeria_chalumnae
ENSEBUG00000015780	sbds	100	57.940	ENSLOCG00000004073	sbds	93	57.940	Lepisosteus_oculatus
ENSEBUG00000015780	sbds	100	59.227	ENSLAFG00000008763	SBDS	93	59.227	Loxodonta_africana
ENSEBUG00000015780	sbds	92	63.768	ENSMFAG00000032620	SBDS	93	57.940	Macaca_fascicularis
ENSEBUG00000015780	sbds	92	63.768	ENSMMUG00000045653	SBDS	93	57.940	Macaca_mulatta
ENSEBUG00000015780	sbds	92	63.768	ENSMNEG00000031523	SBDS	93	57.940	Macaca_nemestrina
ENSEBUG00000015780	sbds	96	50.000	ENSMLEG00000036826	SBDS	82	50.000	Mandrillus_leucophaeus
ENSEBUG00000015780	sbds	99	59.914	ENSMAMG00000016062	sbds	93	59.914	Mastacembelus_armatus
ENSEBUG00000015780	sbds	99	59.914	ENSMZEG00005024385	sbds	93	59.914	Maylandia_zebra
ENSEBUG00000015780	sbds	100	59.227	ENSMGAG00000002119	SBDS	93	59.227	Meleagris_gallopavo
ENSEBUG00000015780	sbds	99	48.707	ENSMAUG00000022214	-	92	48.707	Mesocricetus_auratus
ENSEBUG00000015780	sbds	100	58.369	ENSMICG00000014366	SBDS	93	58.369	Microcebus_murinus
ENSEBUG00000015780	sbds	100	58.369	ENSMOCG00000011739	Sbds	93	58.369	Microtus_ochrogaster
ENSEBUG00000015780	sbds	99	52.790	ENSMMOG00000005061	sbds	93	52.542	Mola_mola
ENSEBUG00000015780	sbds	100	58.369	ENSMODG00000006644	SBDS	93	58.369	Monodelphis_domestica
ENSEBUG00000015780	sbds	99	58.190	ENSMALG00000010219	sbds	93	58.190	Monopterus_albus
ENSEBUG00000015780	sbds	100	59.227	MGP_CAROLIEiJ_G0027800	Sbds	99	63.158	Mus_caroli
ENSEBUG00000015780	sbds	100	59.657	ENSMUSG00000025337	Sbds	99	63.158	Mus_musculus
ENSEBUG00000015780	sbds	100	59.227	MGP_PahariEiJ_G0024384	Sbds	99	63.158	Mus_pahari
ENSEBUG00000015780	sbds	100	59.657	MGP_SPRETEiJ_G0028798	Sbds	97	64.072	Mus_spretus
ENSEBUG00000015780	sbds	75	62.500	ENSMPUG00000016192	SBDS	97	62.500	Mustela_putorius_furo
ENSEBUG00000015780	sbds	81	60.440	ENSMLUG00000013575	SBDS	100	60.440	Myotis_lucifugus
ENSEBUG00000015780	sbds	100	59.227	ENSNGAG00000012093	Sbds	93	59.227	Nannospalax_galili
ENSEBUG00000015780	sbds	99	59.914	ENSNBRG00000017027	sbds	93	59.914	Neolamprologus_brichardi
ENSEBUG00000015780	sbds	92	63.768	ENSNLEG00000013288	SBDS	93	57.940	Nomascus_leucogenys
ENSEBUG00000015780	sbds	92	64.251	ENSOPRG00000008721	SBDS	93	58.369	Ochotona_princeps
ENSEBUG00000015780	sbds	95	61.792	ENSODEG00000019253	-	71	61.792	Octodon_degus
ENSEBUG00000015780	sbds	88	56.122	ENSODEG00000000137	-	74	56.122	Octodon_degus
ENSEBUG00000015780	sbds	92	49.515	ENSODEG00000001116	-	82	48.804	Octodon_degus
ENSEBUG00000015780	sbds	99	60.345	ENSONIG00000005874	sbds	93	60.345	Oreochromis_niloticus
ENSEBUG00000015780	sbds	92	63.768	ENSOANG00000007674	-	100	63.768	Ornithorhynchus_anatinus
ENSEBUG00000015780	sbds	92	64.734	ENSOCUG00000003170	SBDS	93	58.798	Oryctolagus_cuniculus
ENSEBUG00000015780	sbds	99	60.776	ENSORLG00000023489	sbds	93	60.776	Oryzias_latipes
ENSEBUG00000015780	sbds	99	59.914	ENSORLG00020019282	sbds	93	59.914	Oryzias_latipes_hni
ENSEBUG00000015780	sbds	99	59.914	ENSORLG00015008005	sbds	93	59.914	Oryzias_latipes_hsok
ENSEBUG00000015780	sbds	99	59.914	ENSOMEG00000022747	sbds	93	59.914	Oryzias_melastigma
ENSEBUG00000015780	sbds	100	58.798	ENSOGAG00000009011	-	93	58.798	Otolemur_garnettii
ENSEBUG00000015780	sbds	92	60.386	ENSOGAG00000015036	-	83	60.386	Otolemur_garnettii
ENSEBUG00000015780	sbds	100	58.369	ENSOARG00000010609	SBDS	93	58.369	Ovis_aries
ENSEBUG00000015780	sbds	100	57.082	ENSPPAG00000043889	-	93	57.082	Pan_paniscus
ENSEBUG00000015780	sbds	100	57.940	ENSPPRG00000002307	SBDS	93	57.940	Panthera_pardus
ENSEBUG00000015780	sbds	100	57.940	ENSPTIG00000021308	SBDS	93	57.940	Panthera_tigris_altaica
ENSEBUG00000015780	sbds	84	55.851	ENSPTRG00000047744	-	81	55.851	Pan_troglodytes
ENSEBUG00000015780	sbds	92	63.768	ENSPTRG00000019254	SBDS	93	57.940	Pan_troglodytes
ENSEBUG00000015780	sbds	84	55.851	ENSPTRG00000050835	-	81	55.851	Pan_troglodytes
ENSEBUG00000015780	sbds	81	56.545	ENSPTRG00000048174	-	85	56.545	Pan_troglodytes
ENSEBUG00000015780	sbds	100	57.940	ENSPANG00000004078	SBDS	93	57.940	Papio_anubis
ENSEBUG00000015780	sbds	100	59.227	ENSPKIG00000006489	sbds	93	59.227	Paramormyrops_kingsleyae
ENSEBUG00000015780	sbds	92	65.217	ENSPSIG00000014603	SBDS	99	65.217	Pelodiscus_sinensis
ENSEBUG00000015780	sbds	99	58.190	ENSPMGG00000004246	sbds	93	58.190	Periophthalmus_magnuspinnatus
ENSEBUG00000015780	sbds	100	59.227	ENSPEMG00000008728	Sbds	93	59.227	Peromyscus_maniculatus_bairdii
ENSEBUG00000015780	sbds	100	60.086	ENSPCIG00000029718	SBDS	93	60.086	Phascolarctos_cinereus
ENSEBUG00000015780	sbds	99	60.345	ENSPFOG00000015837	sbds	93	60.345	Poecilia_formosa
ENSEBUG00000015780	sbds	99	60.345	ENSPLAG00000003641	sbds	93	60.345	Poecilia_latipinna
ENSEBUG00000015780	sbds	99	60.345	ENSPMEG00000019483	sbds	93	60.345	Poecilia_mexicana
ENSEBUG00000015780	sbds	99	59.483	ENSPREG00000018758	sbds	93	59.483	Poecilia_reticulata
ENSEBUG00000015780	sbds	92	63.768	ENSPPYG00000017513	SBDS	93	57.940	Pongo_abelii
ENSEBUG00000015780	sbds	100	58.369	ENSPCOG00000021098	SBDS	93	58.369	Propithecus_coquereli
ENSEBUG00000015780	sbds	100	58.369	ENSPVAG00000009369	SBDS	93	58.369	Pteropus_vampyrus
ENSEBUG00000015780	sbds	99	60.345	ENSPNYG00000022403	sbds	93	60.345	Pundamilia_nyererei
ENSEBUG00000015780	sbds	100	59.657	ENSPNAG00000001120	sbds	93	59.657	Pygocentrus_nattereri
ENSEBUG00000015780	sbds	100	59.227	ENSRNOG00000000888	Sbds	93	59.227	Rattus_norvegicus
ENSEBUG00000015780	sbds	92	63.768	ENSRBIG00000035557	SBDS	90	63.768	Rhinopithecus_bieti
ENSEBUG00000015780	sbds	92	63.768	ENSRROG00000040842	-	90	63.768	Rhinopithecus_roxellana
ENSEBUG00000015780	sbds	92	54.106	ENSRROG00000041986	-	81	54.106	Rhinopithecus_roxellana
ENSEBUG00000015780	sbds	82	40.000	YLR022C	-	76	40.000	Saccharomyces_cerevisiae
ENSEBUG00000015780	sbds	92	63.285	ENSSBOG00000022460	SBDS	89	63.285	Saimiri_boliviensis_boliviensis
ENSEBUG00000015780	sbds	95	53.521	ENSSHAG00000010263	SBDS	84	53.521	Sarcophilus_harrisii
ENSEBUG00000015780	sbds	100	60.515	ENSSFOG00015001108	sbds	93	60.515	Scleropages_formosus
ENSEBUG00000015780	sbds	99	58.621	ENSSMAG00000020506	sbds	93	58.621	Scophthalmus_maximus
ENSEBUG00000015780	sbds	99	58.621	ENSSDUG00000001528	sbds	93	58.621	Seriola_dumerili
ENSEBUG00000015780	sbds	99	58.190	ENSSLDG00000003659	sbds	93	58.190	Seriola_lalandi_dorsalis
ENSEBUG00000015780	sbds	57	59.559	ENSSARG00000013132	-	89	59.559	Sorex_araneus
ENSEBUG00000015780	sbds	70	59.794	ENSSARG00000001899	-	66	59.794	Sorex_araneus
ENSEBUG00000015780	sbds	100	59.227	ENSSPUG00000002699	SBDS	93	59.227	Sphenodon_punctatus
ENSEBUG00000015780	sbds	99	59.914	ENSSPAG00000016419	sbds	93	55.310	Stegastes_partitus
ENSEBUG00000015780	sbds	100	58.369	ENSSSCG00000007732	SBDS	93	58.369	Sus_scrofa
ENSEBUG00000015780	sbds	74	63.636	ENSTGUG00000003426	SBDS	99	63.636	Taeniopygia_guttata
ENSEBUG00000015780	sbds	99	59.052	ENSTRUG00000021443	sbds	93	59.052	Takifugu_rubripes
ENSEBUG00000015780	sbds	99	58.621	ENSTNIG00000019000	sbds	93	58.621	Tetraodon_nigroviridis
ENSEBUG00000015780	sbds	81	47.644	ENSTBEG00000001178	SBDS	91	47.644	Tupaia_belangeri
ENSEBUG00000015780	sbds	92	49.275	ENSTTRG00000003921	SBDS	83	49.275	Tursiops_truncatus
ENSEBUG00000015780	sbds	100	57.940	ENSUAMG00000001326	SBDS	93	57.940	Ursus_americanus
ENSEBUG00000015780	sbds	100	57.940	ENSUMAG00000015353	SBDS	93	57.940	Ursus_maritimus
ENSEBUG00000015780	sbds	92	63.768	ENSVVUG00000016478	SBDS	93	57.940	Vulpes_vulpes
ENSEBUG00000015780	sbds	100	59.227	ENSXETG00000010093	sbds	93	59.227	Xenopus_tropicalis
ENSEBUG00000015780	sbds	99	55.603	ENSXCOG00000010639	sbds	92	55.603	Xiphophorus_couchianus
ENSEBUG00000015780	sbds	99	60.345	ENSXMAG00000006065	sbds	93	60.345	Xiphophorus_maculatus