EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015937 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 2138 bases
Position: chrFYBX02010497.1:922497-924634
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025858	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026434	-	1137	-	ENSEBUP00000025858	378 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015937	srl	63	35.433	ENSEBUG00000010829	EHD1	74	35.433
ENSEBUG00000015937	srl	82	31.325	ENSEBUG00000009968	EHD1	60	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015937	srl	88	67.816	ENSG00000185739	SRL	85	65.508	Homo_sapiens
ENSEBUG00000015937	srl	94	65.775	ENSAPOG00000018093	srl	84	65.775	Acanthochromis_polyacanthus
ENSEBUG00000015937	srl	90	65.169	ENSAPOG00000012432	SRL	80	65.169	Acanthochromis_polyacanthus
ENSEBUG00000015937	srl	94	66.043	ENSACIG00000015799	srl	82	66.043	Amphilophus_citrinellus
ENSEBUG00000015937	srl	90	65.363	ENSACIG00000015419	SRL	81	65.363	Amphilophus_citrinellus
ENSEBUG00000015937	srl	94	65.775	ENSAOCG00000007574	srl	85	65.775	Amphiprion_ocellaris
ENSEBUG00000015937	srl	95	62.933	ENSAOCG00000017049	SRL	81	62.933	Amphiprion_ocellaris
ENSEBUG00000015937	srl	82	65.138	ENSAPEG00000006533	SRL	79	61.003	Amphiprion_percula
ENSEBUG00000015937	srl	94	65.775	ENSAPEG00000006911	srl	79	65.775	Amphiprion_percula
ENSEBUG00000015937	srl	94	66.043	ENSATEG00000024315	srl	79	66.043	Anabas_testudineus
ENSEBUG00000015937	srl	94	66.043	ENSACAG00000016380	SRL	67	66.043	Anolis_carolinensis
ENSEBUG00000015937	srl	94	65.775	ENSACLG00000027685	srl	81	65.775	Astatotilapia_calliptera
ENSEBUG00000015937	srl	90	64.607	ENSAMXG00000038693	SRL	78	64.607	Astyanax_mexicanus
ENSEBUG00000015937	srl	95	66.133	ENSAMXG00000018789	srl	72	66.133	Astyanax_mexicanus
ENSEBUG00000015937	srl	88	68.103	ENSCJAG00000019750	SRL	77	65.775	Callithrix_jacchus
ENSEBUG00000015937	srl	88	67.816	ENSCAFG00000019233	SRL	68	65.508	Canis_familiaris
ENSEBUG00000015937	srl	88	67.816	ENSTSYG00000007919	SRL	85	65.508	Carlito_syrichta
ENSEBUG00000015937	srl	88	67.816	ENSCPOG00000012643	SRL	78	65.241	Cavia_porcellus
ENSEBUG00000015937	srl	88	68.103	ENSCCAG00000032646	SRL	93	67.887	Cebus_capucinus
ENSEBUG00000015937	srl	88	67.816	ENSCATG00000032227	-	77	65.508	Cercocebus_atys
ENSEBUG00000015937	srl	88	67.816	ENSCLAG00000016242	SRL	78	65.241	Chinchilla_lanigera
ENSEBUG00000015937	srl	88	68.391	ENSCHOG00000001618	SRL	50	66.043	Choloepus_hoffmanni
ENSEBUG00000015937	srl	94	66.578	ENSCPBG00000026371	SRL	76	66.578	Chrysemys_picta_bellii
ENSEBUG00000015937	srl	91	58.427	ENSCING00000005231	-	80	58.427	Ciona_intestinalis
ENSEBUG00000015937	srl	88	67.816	ENSCANG00000035872	SRL	85	65.508	Colobus_angolensis_palliatus
ENSEBUG00000015937	srl	88	67.816	ENSCGRG00001016630	Srl	75	68.067	Cricetulus_griseus_chok1gshd
ENSEBUG00000015937	srl	88	67.816	ENSCGRG00000005458	Srl	75	68.067	Cricetulus_griseus_crigri
ENSEBUG00000015937	srl	89	63.380	ENSCSEG00000011866	SRL	71	63.202	Cynoglossus_semilaevis
ENSEBUG00000015937	srl	94	65.775	ENSCSEG00000016151	srl	79	65.775	Cynoglossus_semilaevis
ENSEBUG00000015937	srl	95	65.957	ENSCVAG00000003513	srl	80	65.957	Cyprinodon_variegatus
ENSEBUG00000015937	srl	89	63.842	ENSDARG00000112959	CABZ01072309.1	92	63.842	Danio_rerio
ENSEBUG00000015937	srl	94	66.578	ENSDARG00000104587	srl	79	66.578	Danio_rerio
ENSEBUG00000015937	srl	88	67.816	ENSDORG00000014807	Srl	75	68.067	Dipodomys_ordii
ENSEBUG00000015937	srl	88	68.103	ENSECAG00000024219	SRL	77	65.775	Equus_caballus
ENSEBUG00000015937	srl	94	66.845	ENSELUG00000015616	srl	76	66.845	Esox_lucius
ENSEBUG00000015937	srl	88	67.816	ENSFCAG00000022075	SRL	77	65.508	Felis_catus
ENSEBUG00000015937	srl	95	65.160	ENSFALG00000004328	SRL	52	65.160	Ficedula_albicollis
ENSEBUG00000015937	srl	88	67.816	ENSFDAG00000006199	SRL	78	65.508	Fukomys_damarensis
ENSEBUG00000015937	srl	90	64.045	ENSFHEG00000011854	SRL	79	64.387	Fundulus_heteroclitus
ENSEBUG00000015937	srl	94	65.508	ENSFHEG00000011239	srl	80	65.508	Fundulus_heteroclitus
ENSEBUG00000015937	srl	94	64.171	ENSGMOG00000014954	srl	82	64.171	Gadus_morhua
ENSEBUG00000015937	srl	95	65.691	ENSGALG00000038884	SRL	78	65.691	Gallus_gallus
ENSEBUG00000015937	srl	94	66.043	ENSGAFG00000000010	srl	80	66.043	Gambusia_affinis
ENSEBUG00000015937	srl	90	64.607	ENSGAFG00000016984	SRL	80	64.607	Gambusia_affinis
ENSEBUG00000015937	srl	94	64.706	ENSGACG00000011332	srl	82	64.706	Gasterosteus_aculeatus
ENSEBUG00000015937	srl	88	67.816	ENSGGOG00000011312	-	77	65.508	Gorilla_gorilla
ENSEBUG00000015937	srl	94	65.775	ENSHBUG00000007581	srl	81	65.775	Haplochromis_burtoni
ENSEBUG00000015937	srl	88	67.816	ENSHGLG00000015271	SRL	78	65.508	Heterocephalus_glaber_female
ENSEBUG00000015937	srl	88	67.816	ENSHGLG00100019378	SRL	78	65.508	Heterocephalus_glaber_male
ENSEBUG00000015937	srl	94	65.508	ENSHCOG00000008687	srl	82	65.508	Hippocampus_comes
ENSEBUG00000015937	srl	90	64.957	ENSIPUG00000011609	SRL	78	64.957	Ictalurus_punctatus
ENSEBUG00000015937	srl	94	66.043	ENSIPUG00000012513	srl	79	66.043	Ictalurus_punctatus
ENSEBUG00000015937	srl	88	67.529	ENSSTOG00000021151	-	75	67.507	Ictidomys_tridecemlineatus
ENSEBUG00000015937	srl	88	67.816	ENSJJAG00000016400	Srl	75	67.787	Jaculus_jaculus
ENSEBUG00000015937	srl	94	66.310	ENSKMAG00000014115	srl	82	66.133	Kryptolebias_marmoratus
ENSEBUG00000015937	srl	90	64.246	ENSKMAG00000019537	SRL	82	64.246	Kryptolebias_marmoratus
ENSEBUG00000015937	srl	94	65.508	ENSLBEG00000026643	srl	79	65.508	Labrus_bergylta
ENSEBUG00000015937	srl	95	61.333	ENSLBEG00000013811	SRL	81	61.333	Labrus_bergylta
ENSEBUG00000015937	srl	94	66.845	ENSLACG00000002825	SRL	82	66.845	Latimeria_chalumnae
ENSEBUG00000015937	srl	95	66.667	ENSLOCG00000002644	srl	78	66.667	Lepisosteus_oculatus
ENSEBUG00000015937	srl	88	67.622	ENSMFAG00000037383	SRL	85	65.508	Macaca_fascicularis
ENSEBUG00000015937	srl	88	67.816	ENSMNEG00000019236	-	77	65.508	Macaca_nemestrina
ENSEBUG00000015937	srl	88	69.006	ENSMLEG00000032156	SRL	83	66.576	Mandrillus_leucophaeus
ENSEBUG00000015937	srl	94	65.775	ENSMAMG00000023322	srl	79	65.775	Mastacembelus_armatus
ENSEBUG00000015937	srl	94	65.775	ENSMZEG00005004548	srl	81	65.775	Maylandia_zebra
ENSEBUG00000015937	srl	95	65.691	ENSMGAG00000009342	SRL	77	71.242	Meleagris_gallopavo
ENSEBUG00000015937	srl	88	68.678	ENSMICG00000032307	SRL	77	66.310	Microcebus_murinus
ENSEBUG00000015937	srl	88	67.529	ENSMOCG00000008208	Srl	75	67.787	Microtus_ochrogaster
ENSEBUG00000015937	srl	95	61.600	ENSMMOG00000021572	SRL	81	61.600	Mola_mola
ENSEBUG00000015937	srl	94	64.973	ENSMMOG00000013970	srl	82	64.973	Mola_mola
ENSEBUG00000015937	srl	94	66.043	ENSMALG00000005039	srl	82	66.043	Monopterus_albus
ENSEBUG00000015937	srl	90	64.607	ENSMALG00000000670	SRL	85	64.607	Monopterus_albus
ENSEBUG00000015937	srl	90	68.067	MGP_CAROLIEiJ_G0020400	Srl	75	68.067	Mus_caroli
ENSEBUG00000015937	srl	90	68.067	ENSMUSG00000022519	Srl	75	68.067	Mus_musculus
ENSEBUG00000015937	srl	90	68.067	MGP_SPRETEiJ_G0021294	Srl	75	68.067	Mus_spretus
ENSEBUG00000015937	srl	88	68.103	ENSNGAG00000019741	Srl	75	68.067	Nannospalax_galili
ENSEBUG00000015937	srl	94	65.775	ENSNBRG00000023775	srl	79	65.775	Neolamprologus_brichardi
ENSEBUG00000015937	srl	88	67.816	ENSNLEG00000029051	SRL	83	65.508	Nomascus_leucogenys
ENSEBUG00000015937	srl	88	68.103	ENSODEG00000013256	SRL	78	65.508	Octodon_degus
ENSEBUG00000015937	srl	94	65.775	ENSONIG00000005192	srl	79	65.775	Oreochromis_niloticus
ENSEBUG00000015937	srl	90	65.266	ENSORLG00000015064	SRL	79	65.266	Oryzias_latipes
ENSEBUG00000015937	srl	94	65.508	ENSORLG00000008291	srl	88	65.508	Oryzias_latipes
ENSEBUG00000015937	srl	90	64.986	ENSORLG00020018173	SRL	79	64.986	Oryzias_latipes_hni
ENSEBUG00000015937	srl	94	65.508	ENSORLG00020019784	srl	76	65.508	Oryzias_latipes_hni
ENSEBUG00000015937	srl	90	65.266	ENSORLG00015019063	SRL	79	65.266	Oryzias_latipes_hsok
ENSEBUG00000015937	srl	94	65.508	ENSORLG00015009342	srl	76	65.508	Oryzias_latipes_hsok
ENSEBUG00000015937	srl	94	65.508	ENSOMEG00000010006	srl	82	65.508	Oryzias_melastigma
ENSEBUG00000015937	srl	88	67.816	ENSPPAG00000024919	-	85	65.508	Pan_paniscus
ENSEBUG00000015937	srl	88	67.816	ENSPPRG00000010274	SRL	85	65.508	Panthera_pardus
ENSEBUG00000015937	srl	88	67.816	ENSPTIG00000015162	SRL	85	65.508	Panthera_tigris_altaica
ENSEBUG00000015937	srl	88	67.816	ENSPTRG00000007712	SRL	85	65.508	Pan_troglodytes
ENSEBUG00000015937	srl	88	67.816	ENSPANG00000013804	SRL	79	65.508	Papio_anubis
ENSEBUG00000015937	srl	95	62.933	ENSPKIG00000024974	SRL	74	62.933	Paramormyrops_kingsleyae
ENSEBUG00000015937	srl	95	66.223	ENSPKIG00000006405	srl	78	66.223	Paramormyrops_kingsleyae
ENSEBUG00000015937	srl	94	65.508	ENSPMGG00000021081	srl	80	65.508	Periophthalmus_magnuspinnatus
ENSEBUG00000015937	srl	90	62.745	ENSPMGG00000023505	-	82	62.745	Periophthalmus_magnuspinnatus
ENSEBUG00000015937	srl	88	67.816	ENSPEMG00000015842	Srl	75	67.787	Peromyscus_maniculatus_bairdii
ENSEBUG00000015937	srl	95	68.351	ENSPMAG00000004786	srl	85	68.351	Petromyzon_marinus
ENSEBUG00000015937	srl	94	65.775	ENSPCIG00000012128	SRL	80	65.775	Phascolarctos_cinereus
ENSEBUG00000015937	srl	94	66.043	ENSPFOG00000011408	srl	76	66.043	Poecilia_formosa
ENSEBUG00000015937	srl	93	62.331	ENSPLAG00000002932	SRL	83	62.331	Poecilia_latipinna
ENSEBUG00000015937	srl	94	66.043	ENSPLAG00000008017	srl	80	66.043	Poecilia_latipinna
ENSEBUG00000015937	srl	94	66.043	ENSPMEG00000006745	srl	80	66.043	Poecilia_mexicana
ENSEBUG00000015937	srl	94	66.043	ENSPREG00000007751	srl	82	66.043	Poecilia_reticulata
ENSEBUG00000015937	srl	93	62.331	ENSPREG00000000315	SRL	83	62.331	Poecilia_reticulata
ENSEBUG00000015937	srl	88	67.816	ENSPPYG00000007053	SRL	85	65.508	Pongo_abelii
ENSEBUG00000015937	srl	88	68.678	ENSPCOG00000023135	SRL	85	66.310	Propithecus_coquereli
ENSEBUG00000015937	srl	94	65.775	ENSPNYG00000001200	srl	81	65.775	Pundamilia_nyererei
ENSEBUG00000015937	srl	90	64.888	ENSPNAG00000007361	-	73	64.888	Pygocentrus_nattereri
ENSEBUG00000015937	srl	94	65.508	ENSPNAG00000023106	srl	79	65.508	Pygocentrus_nattereri
ENSEBUG00000015937	srl	88	68.103	ENSSBOG00000029273	SRL	77	65.775	Saimiri_boliviensis_boliviensis
ENSEBUG00000015937	srl	95	66.667	ENSSFOG00015009773	srl	78	66.667	Scleropages_formosus
ENSEBUG00000015937	srl	94	64.973	ENSSMAG00000016274	srl	81	64.973	Scophthalmus_maximus
ENSEBUG00000015937	srl	91	61.202	ENSSDUG00000009161	SRL	82	61.202	Seriola_dumerili
ENSEBUG00000015937	srl	94	65.508	ENSSDUG00000010808	srl	82	65.508	Seriola_dumerili
ENSEBUG00000015937	srl	90	63.408	ENSSLDG00000014601	SRL	79	63.056	Seriola_lalandi_dorsalis
ENSEBUG00000015937	srl	94	65.508	ENSSLDG00000022024	srl	80	65.508	Seriola_lalandi_dorsalis
ENSEBUG00000015937	srl	94	65.241	ENSSPUG00000016859	SRL	81	65.241	Sphenodon_punctatus
ENSEBUG00000015937	srl	90	65.449	ENSSPAG00000014254	SRL	80	65.449	Stegastes_partitus
ENSEBUG00000015937	srl	94	66.043	ENSSPAG00000019105	srl	79	66.043	Stegastes_partitus
ENSEBUG00000015937	srl	88	67.529	ENSSSCG00000007949	SRL	82	65.241	Sus_scrofa
ENSEBUG00000015937	srl	90	66.760	ENSTGUG00000016121	-	98	66.760	Taeniopygia_guttata
ENSEBUG00000015937	srl	95	65.160	ENSTGUG00000003951	-	81	65.160	Taeniopygia_guttata
ENSEBUG00000015937	srl	94	65.775	ENSTRUG00000006005	srl	79	65.775	Takifugu_rubripes
ENSEBUG00000015937	srl	94	65.775	ENSTNIG00000009739	srl	79	65.775	Tetraodon_nigroviridis
ENSEBUG00000015937	srl	95	64.628	ENSXETG00000017313	srl	82	64.628	Xenopus_tropicalis
ENSEBUG00000015937	srl	94	65.775	ENSXCOG00000010424	srl	85	65.775	Xiphophorus_couchianus
ENSEBUG00000015937	srl	90	64.607	ENSXCOG00000014584	SRL	80	64.607	Xiphophorus_couchianus
ENSEBUG00000015937	srl	94	65.775	ENSXMAG00000004625	srl	75	65.775	Xiphophorus_maculatus