EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000015945 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 78969 bases
Position: chrFYBX02010138.1:1411451-1490419
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025870	DEAD	PF00270.29	8.8e-06	1	1
ENSEBUP00000025896	DEAD	PF00270.29	8.8e-06	1	1
ENSEBUP00000025870	HA2	PF04408.23	1e-14	1	1
ENSEBUP00000025896	HA2	PF04408.23	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026446	-	5043	-	ENSEBUP00000025870	1091 (aa)	-	-
ENSEBUT00000026472	-	4955	-	ENSEBUP00000025896	1091 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000015945	-	61	44.091	ENSEBUG00000014315	-	50	44.091
ENSEBUG00000015945	-	51	32.105	ENSEBUG00000004428	dhx15	82	32.105
ENSEBUG00000015945	-	70	33.888	ENSEBUG00000009761	dhx57	59	35.273
ENSEBUG00000015945	-	60	44.872	ENSEBUG00000005040	-	83	44.872
ENSEBUG00000015945	-	53	43.590	ENSEBUG00000005875	dhx38	52	31.089
ENSEBUG00000015945	-	55	33.113	ENSEBUG00000014272	dhx34	50	33.113
ENSEBUG00000015945	-	57	50.490	ENSEBUG00000016505	dhx30	62	50.490
ENSEBUG00000015945	-	54	31.879	ENSEBUG00000001802	dhx16	56	31.879
ENSEBUG00000015945	-	59	30.000	ENSEBUG00000000373	zgc:158828	85	30.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015945	-	88	69.102	ENSG00000135829	DHX9	83	65.695	Homo_sapiens
ENSEBUG00000015945	-	88	69.415	ENSAMEG00000002233	DHX9	82	65.449	Ailuropoda_melanoleuca
ENSEBUG00000015945	-	88	66.771	ENSACIG00000016431	dhx9	81	64.306	Amphilophus_citrinellus
ENSEBUG00000015945	-	79	67.674	ENSAOCG00000010719	dhx9	79	67.907	Amphiprion_ocellaris
ENSEBUG00000015945	-	88	66.493	ENSAPEG00000006339	dhx9	83	63.202	Amphiprion_percula
ENSEBUG00000015945	-	88	67.223	ENSATEG00000007101	dhx9	80	67.521	Anabas_testudineus
ENSEBUG00000015945	-	88	69.311	ENSACAG00000005023	DHX9	83	66.792	Anolis_carolinensis
ENSEBUG00000015945	-	88	68.789	ENSANAG00000030279	DHX9	83	64.822	Aotus_nancymaae
ENSEBUG00000015945	-	88	66.701	ENSACLG00000022296	dhx9	80	67.093	Astatotilapia_calliptera
ENSEBUG00000015945	-	88	69.207	ENSBTAG00000019821	DHX9	84	64.880	Bos_taurus
ENSEBUG00000015945	-	93	43.609	WBGene00004355	rha-1	83	42.624	Caenorhabditis_elegans
ENSEBUG00000015945	-	88	68.580	ENSCJAG00000004821	DHX9	99	64.540	Callithrix_jacchus
ENSEBUG00000015945	-	88	69.415	ENSCAFG00000013205	DHX9	82	65.918	Canis_familiaris
ENSEBUG00000015945	-	88	69.415	ENSCAFG00020014886	DHX9	82	65.918	Canis_lupus_dingo
ENSEBUG00000015945	-	88	67.153	ENSCHIG00000018643	DHX9	83	63.340	Capra_hircus
ENSEBUG00000015945	-	88	69.207	ENSTSYG00000007970	DHX9	80	69.730	Carlito_syrichta
ENSEBUG00000015945	-	75	58.586	ENSCAPG00000015604	DHX9	75	54.769	Cavia_aperea
ENSEBUG00000015945	-	88	69.207	ENSCPOG00000040669	DHX9	76	66.288	Cavia_porcellus
ENSEBUG00000015945	-	75	69.968	ENSCCAG00000022597	DHX9	81	70.447	Cebus_capucinus
ENSEBUG00000015945	-	88	69.102	ENSCATG00000027871	DHX9	78	70.828	Cercocebus_atys
ENSEBUG00000015945	-	88	69.624	ENSCLAG00000010684	DHX9	75	66.381	Chinchilla_lanigera
ENSEBUG00000015945	-	88	69.207	ENSCSAG00000012549	DHX9	94	65.144	Chlorocebus_sabaeus
ENSEBUG00000015945	-	85	61.514	ENSCHOG00000012736	DHX9	80	61.622	Choloepus_hoffmanni
ENSEBUG00000015945	-	88	69.119	ENSCPBG00000015757	DHX9	82	65.295	Chrysemys_picta_bellii
ENSEBUG00000015945	-	91	56.212	ENSCSAVG00000001493	-	82	58.830	Ciona_savignyi
ENSEBUG00000015945	-	88	69.102	ENSCANG00000032888	DHX9	83	65.602	Colobus_angolensis_palliatus
ENSEBUG00000015945	-	88	69.624	ENSCGRG00001015796	Dhx9	82	66.826	Cricetulus_griseus_chok1gshd
ENSEBUG00000015945	-	86	66.596	ENSCSEG00000017621	dhx9	89	66.596	Cynoglossus_semilaevis
ENSEBUG00000015945	-	88	67.641	ENSDARG00000079725	dhx9	83	63.662	Danio_rerio
ENSEBUG00000015945	-	89	69.183	ENSDNOG00000004038	DHX9	83	66.224	Dasypus_novemcinctus
ENSEBUG00000015945	-	88	68.926	ENSDORG00000012610	Dhx9	78	65.485	Dipodomys_ordii
ENSEBUG00000015945	-	89	52.994	FBgn0002774	mle	99	51.979	Drosophila_melanogaster
ENSEBUG00000015945	-	82	62.775	ENSETEG00000009729	DHX9	75	58.993	Echinops_telfairi
ENSEBUG00000015945	-	88	69.833	ENSEASG00005006589	DHX9	82	65.463	Equus_asinus_asinus
ENSEBUG00000015945	-	88	69.833	ENSECAG00000011933	DHX9	82	66.762	Equus_caballus
ENSEBUG00000015945	-	76	67.806	ENSEEUG00000004824	DHX9	65	67.949	Erinaceus_europaeus
ENSEBUG00000015945	-	88	67.537	ENSELUG00000010512	dhx9	78	66.567	Esox_lucius
ENSEBUG00000015945	-	88	68.998	ENSFCAG00000019306	DHX9	82	65.543	Felis_catus
ENSEBUG00000015945	-	88	67.469	ENSFALG00000002992	DHX9	84	64.203	Ficedula_albicollis
ENSEBUG00000015945	-	88	69.729	ENSFDAG00000011454	DHX9	76	66.382	Fukomys_damarensis
ENSEBUG00000015945	-	88	68.808	ENSGAGG00000024443	DHX9	79	69.501	Gopherus_agassizii
ENSEBUG00000015945	-	89	53.830	ENSGGOG00000040887	-	79	53.481	Gorilla_gorilla
ENSEBUG00000015945	-	88	69.102	ENSGGOG00000013533	DHX9	83	65.695	Gorilla_gorilla
ENSEBUG00000015945	-	88	66.493	ENSHBUG00000004129	dhx9	81	64.211	Haplochromis_burtoni
ENSEBUG00000015945	-	88	69.415	ENSHGLG00000005769	DHX9	77	66.635	Heterocephalus_glaber_female
ENSEBUG00000015945	-	88	69.415	ENSHGLG00100015628	DHX9	74	66.635	Heterocephalus_glaber_male
ENSEBUG00000015945	-	87	66.457	ENSHCOG00000012968	dhx9	82	62.710	Hippocampus_comes
ENSEBUG00000015945	-	88	67.294	ENSIPUG00000016675	dhx9	93	65.473	Ictalurus_punctatus
ENSEBUG00000015945	-	89	68.976	ENSSTOG00000016288	DHX9	80	65.356	Ictidomys_tridecemlineatus
ENSEBUG00000015945	-	89	68.107	ENSJJAG00000003249	Dhx9	79	65.448	Jaculus_jaculus
ENSEBUG00000015945	-	88	47.751	ENSLACG00000017767	DHX9	82	46.623	Latimeria_chalumnae
ENSEBUG00000015945	-	88	67.812	ENSLOCG00000002158	dhx9	82	64.426	Lepisosteus_oculatus
ENSEBUG00000015945	-	89	69.493	ENSLAFG00000022058	DHX9	83	66.098	Loxodonta_africana
ENSEBUG00000015945	-	88	69.102	ENSMFAG00000041152	DHX9	78	70.828	Macaca_fascicularis
ENSEBUG00000015945	-	88	69.102	ENSMMUG00000005635	DHX9	83	65.051	Macaca_mulatta
ENSEBUG00000015945	-	88	69.102	ENSMNEG00000041195	DHX9	83	65.051	Macaca_nemestrina
ENSEBUG00000015945	-	88	69.102	ENSMLEG00000039925	DHX9	81	68.269	Mandrillus_leucophaeus
ENSEBUG00000015945	-	88	67.119	ENSMAMG00000018644	dhx9	82	66.940	Mastacembelus_armatus
ENSEBUG00000015945	-	88	66.701	ENSMZEG00005014167	dhx9	81	64.402	Maylandia_zebra
ENSEBUG00000015945	-	88	69.624	ENSMAUG00000020414	Dhx9	77	66.263	Mesocricetus_auratus
ENSEBUG00000015945	-	88	69.207	ENSMICG00000008285	DHX9	99	66.131	Microcebus_murinus
ENSEBUG00000015945	-	88	69.447	ENSMOCG00000019404	Dhx9	78	66.111	Microtus_ochrogaster
ENSEBUG00000015945	-	88	62.422	ENSMMOG00000001268	dhx9	99	61.585	Mola_mola
ENSEBUG00000015945	-	88	69.969	ENSMODG00000006955	DHX9	82	66.257	Monodelphis_domestica
ENSEBUG00000015945	-	87	68.249	ENSMALG00000000318	dhx9	80	68.590	Monopterus_albus
ENSEBUG00000015945	-	88	69.311	MGP_CAROLIEiJ_G0014709	Dhx9	78	66.078	Mus_caroli
ENSEBUG00000015945	-	88	69.311	ENSMUSG00000042699	Dhx9	78	65.559	Mus_musculus
ENSEBUG00000015945	-	88	69.311	MGP_SPRETEiJ_G0015516	Dhx9	77	81.250	Mus_spretus
ENSEBUG00000015945	-	88	69.080	ENSMPUG00000011544	DHX9	80	69.183	Mustela_putorius_furo
ENSEBUG00000015945	-	88	69.102	ENSMLUG00000011163	DHX9	82	65.511	Myotis_lucifugus
ENSEBUG00000015945	-	88	69.102	ENSNLEG00000018013	DHX9	83	65.602	Nomascus_leucogenys
ENSEBUG00000015945	-	53	75.926	ENSMEUG00000001470	-	50	75.926	Notamacropus_eugenii
ENSEBUG00000015945	-	86	62.500	ENSOPRG00000016111	DHX9	81	62.500	Ochotona_princeps
ENSEBUG00000015945	-	88	69.729	ENSODEG00000012659	DHX9	78	65.438	Octodon_degus
ENSEBUG00000015945	-	88	66.910	ENSONIG00000000293	dhx9	82	63.858	Oreochromis_niloticus
ENSEBUG00000015945	-	88	69.311	ENSOCUG00000014651	DHX9	83	66.319	Oryctolagus_cuniculus
ENSEBUG00000015945	-	88	68.058	ENSORLG00000007454	dhx9	82	64.728	Oryzias_latipes
ENSEBUG00000015945	-	88	67.850	ENSORLG00020015369	dhx9	81	65.276	Oryzias_latipes_hni
ENSEBUG00000015945	-	88	67.850	ENSORLG00015000892	dhx9	82	64.380	Oryzias_latipes_hsok
ENSEBUG00000015945	-	88	67.432	ENSOMEG00000002437	dhx9	81	67.043	Oryzias_melastigma
ENSEBUG00000015945	-	88	69.520	ENSOGAG00000002620	DHX9	82	65.945	Otolemur_garnettii
ENSEBUG00000015945	-	88	69.135	ENSOARG00000019089	DHX9	82	65.302	Ovis_aries
ENSEBUG00000015945	-	88	69.102	ENSPPAG00000030190	DHX9	78	70.828	Pan_paniscus
ENSEBUG00000015945	-	88	69.102	ENSPPRG00000005890	DHX9	82	65.385	Panthera_pardus
ENSEBUG00000015945	-	88	69.102	ENSPTIG00000021059	DHX9	82	65.385	Panthera_tigris_altaica
ENSEBUG00000015945	-	88	69.102	ENSPTRG00000001759	DHX9	83	65.695	Pan_troglodytes
ENSEBUG00000015945	-	88	69.102	ENSPANG00000012826	DHX9	83	65.051	Papio_anubis
ENSEBUG00000015945	-	89	67.387	ENSPKIG00000006698	dhx9	81	65.414	Paramormyrops_kingsleyae
ENSEBUG00000015945	-	88	69.119	ENSPSIG00000006241	DHX9	82	66.794	Pelodiscus_sinensis
ENSEBUG00000015945	-	88	67.641	ENSPMGG00000009280	dhx9	82	63.704	Periophthalmus_magnuspinnatus
ENSEBUG00000015945	-	88	69.415	ENSPEMG00000001238	Dhx9	77	66.354	Peromyscus_maniculatus_bairdii
ENSEBUG00000015945	-	88	69.969	ENSPCIG00000003716	DHX9	82	68.649	Phascolarctos_cinereus
ENSEBUG00000015945	-	87	67.053	ENSPFOG00000019152	-	81	67.053	Poecilia_formosa
ENSEBUG00000015945	-	88	67.119	ENSPLAG00000001496	dhx9	84	64.763	Poecilia_latipinna
ENSEBUG00000015945	-	87	66.842	ENSPMEG00000019991	dhx9	80	67.053	Poecilia_mexicana
ENSEBUG00000015945	-	88	66.806	ENSPREG00000019307	dhx9	81	66.097	Poecilia_reticulata
ENSEBUG00000015945	-	88	69.102	ENSPPYG00000000431	DHX9	83	65.070	Pongo_abelii
ENSEBUG00000015945	-	88	68.841	ENSPCOG00000018029	DHX9	83	65.625	Propithecus_coquereli
ENSEBUG00000015945	-	88	68.300	ENSPVAG00000000836	DHX9	82	64.459	Pteropus_vampyrus
ENSEBUG00000015945	-	88	66.701	ENSPNYG00000008480	dhx9	83	63.346	Pundamilia_nyererei
ENSEBUG00000015945	-	88	68.025	ENSPNAG00000021343	dhx9	83	65.103	Pygocentrus_nattereri
ENSEBUG00000015945	-	88	69.239	ENSRNOG00000002735	Dhx9	81	69.415	Rattus_norvegicus
ENSEBUG00000015945	-	88	69.102	ENSRBIG00000041202	DHX9	83	65.602	Rhinopithecus_bieti
ENSEBUG00000015945	-	88	69.102	ENSRROG00000044740	DHX9	99	65.602	Rhinopithecus_roxellana
ENSEBUG00000015945	-	88	65.073	ENSSBOG00000026174	DHX9	82	61.856	Saimiri_boliviensis_boliviensis
ENSEBUG00000015945	-	88	69.969	ENSSHAG00000008540	DHX9	81	69.467	Sarcophilus_harrisii
ENSEBUG00000015945	-	88	68.685	ENSSFOG00015017378	dhx9	88	64.962	Scleropages_formosus
ENSEBUG00000015945	-	86	66.986	ENSSDUG00000017407	dhx9	79	67.306	Seriola_dumerili
ENSEBUG00000015945	-	86	67.093	ENSSLDG00000003926	dhx9	82	67.093	Seriola_lalandi_dorsalis
ENSEBUG00000015945	-	78	69.760	ENSSARG00000003931	DHX9	73	70.240	Sorex_araneus
ENSEBUG00000015945	-	88	69.311	ENSSPUG00000003934	DHX9	83	65.983	Sphenodon_punctatus
ENSEBUG00000015945	-	88	66.910	ENSSPAG00000009690	dhx9	83	64.004	Stegastes_partitus
ENSEBUG00000015945	-	88	68.894	ENSSSCG00000026806	DHX9	89	65.856	Sus_scrofa
ENSEBUG00000015945	-	59	67.385	ENSTGUG00000004038	-	76	67.385	Taeniopygia_guttata
ENSEBUG00000015945	-	71	69.872	ENSTBEG00000014052	DHX9	62	69.872	Tupaia_belangeri
ENSEBUG00000015945	-	86	67.415	ENSTTRG00000007665	DHX9	81	67.521	Tursiops_truncatus
ENSEBUG00000015945	-	88	69.415	ENSUAMG00000012201	DHX9	82	69.765	Ursus_americanus
ENSEBUG00000015945	-	88	69.311	ENSUMAG00000016482	DHX9	82	65.262	Ursus_maritimus
ENSEBUG00000015945	-	80	67.391	ENSVPAG00000008097	DHX9	69	67.391	Vicugna_pacos
ENSEBUG00000015945	-	88	69.415	ENSVVUG00000008915	DHX9	82	66.011	Vulpes_vulpes
ENSEBUG00000015945	-	89	68.285	ENSXETG00000012515	dhx9	99	62.991	Xenopus_tropicalis