EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000015959 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
SCR3
Full Name
-
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Minus strand
Length
290320 bases
Position
chrFYBX02010293.1:1007576-1297895
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000025915RRM_1PF00076.222.9e-3312
ENSEBUP00000025915RRM_1PF00076.222.9e-3322
ENSEBUP00000025895RRM_1PF00076.223.3e-3312
ENSEBUP00000025895RRM_1PF00076.223.3e-3322
ENSEBUP00000025940RRM_1PF00076.223.8e-3312
ENSEBUP00000025940RRM_1PF00076.223.8e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000026471-3816-ENSEBUP00000025895419 (aa)--
ENSEBUT00000026516-1922-ENSEBUP00000025940445 (aa)--
ENSEBUT00000026491-3771-ENSEBUP00000025915404 (aa)--
Gene Model
Click here to download ENSEBUG00000015959's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015959's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000015959-9579.795ENSEBUG00000003216-9779.284
ENSEBUG00000015959-5634.513ENSEBUG00000007835-5540.385
ENSEBUG00000015959-6556.767ENSEBUG00000005830rbms38555.849
ENSEBUG00000015959-9169.355ENSEBUG00000003357-9170.704
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000015959-8669.274ENSG00000076067RBMS210064.311Homo_sapiens
ENSEBUG00000015959-8673.926ENSAPOG00000014215rbms2b9270.940Acanthochromis_polyacanthus
ENSEBUG00000015959-8676.724ENSAPOG00000023300rbms2a9568.493Acanthochromis_polyacanthus
ENSEBUG00000015959-8569.774ENSAMEG00000004054RBMS28769.774Ailuropoda_melanoleuca
ENSEBUG00000015959-8670.977ENSACIG00000021779rbms2a9971.481Amphilophus_citrinellus
ENSEBUG00000015959-8676.571ENSAOCG00000008301rbms2a9378.019Amphiprion_ocellaris
ENSEBUG00000015959-8673.926ENSAOCG00000024245rbms2b8573.504Amphiprion_ocellaris
ENSEBUG00000015959-8676.068ENSAPEG00000010379rbms2a8876.068Amphiprion_percula
ENSEBUG00000015959-8673.926ENSAPEG00000003556rbms2b8573.504Amphiprion_percula
ENSEBUG00000015959-8773.521ENSATEG00000022569rbms2b8873.789Anabas_testudineus
ENSEBUG00000015959-8676.286ENSATEG00000024715rbms2a8776.504Anabas_testudineus
ENSEBUG00000015959-8672.238ENSACAG00000016623RBMS28671.831Anolis_carolinensis
ENSEBUG00000015959-8657.821ENSANAG00000038292RBMS28757.821Aotus_nancymaae
ENSEBUG00000015959-9370.449ENSACLG00000006706rbms2b8673.219Astatotilapia_calliptera
ENSEBUG00000015959-8675.287ENSACLG00000002393rbms2a9970.438Astatotilapia_calliptera
ENSEBUG00000015959-9567.013ENSAMXG00000024719rbms2a8770.571Astyanax_mexicanus
ENSEBUG00000015959-8673.639ENSAMXG00000017399rbms2b8673.088Astyanax_mexicanus
ENSEBUG00000015959-8668.333ENSBTAG00000017830RBMS28768.820Bos_taurus
ENSEBUG00000015959-8567.797ENSCJAG00000010803RBMS28768.644Callithrix_jacchus
ENSEBUG00000015959-6870.979ENSCJAG00000038571-6270.979Callithrix_jacchus
ENSEBUG00000015959-8668.994ENSCAFG00000000134RBMS28769.492Canis_familiaris
ENSEBUG00000015959-8668.994ENSCAFG00020024460RBMS29469.492Canis_lupus_dingo
ENSEBUG00000015959-8668.889ENSCHIG00000020791RBMS29267.257Capra_hircus
ENSEBUG00000015959-8669.274ENSTSYG00000001167RBMS28769.774Carlito_syrichta
ENSEBUG00000015959-8541.429ENSCAPG00000007348-9140.571Cavia_aperea
ENSEBUG00000015959-8568.644ENSCPOG00000008256RBMS28768.644Cavia_porcellus
ENSEBUG00000015959-7565.385ENSCCAG00000030291RBMS210063.251Cebus_capucinus
ENSEBUG00000015959-8569.774ENSCATG00000003342RBMS28769.774Cercocebus_atys
ENSEBUG00000015959-9465.625ENSCLAG00000012661RBMS28668.116Chinchilla_lanigera
ENSEBUG00000015959-8669.832ENSCSAG00000005074RBMS28770.339Chlorocebus_sabaeus
ENSEBUG00000015959-8550.282ENSCHOG00000007372RBMS28750.282Choloepus_hoffmanni
ENSEBUG00000015959-8673.926ENSCPBG00000014176RBMS28773.504Chrysemys_picta_bellii
ENSEBUG00000015959-8349.415ENSCING00000006391-7650.610Ciona_intestinalis
ENSEBUG00000015959-7951.227ENSCSAVG00000004539-5570.635Ciona_savignyi
ENSEBUG00000015959-8669.553ENSCANG00000038904RBMS28770.056Colobus_angolensis_palliatus
ENSEBUG00000015959-9465.365ENSCGRG00001023923Rbms28668.116Cricetulus_griseus_chok1gshd
ENSEBUG00000015959-9465.365ENSCGRG00000017259Rbms28668.116Cricetulus_griseus_crigri
ENSEBUG00000015959-8072.917ENSCSEG00000003790rbms2a8772.414Cynoglossus_semilaevis
ENSEBUG00000015959-8672.779ENSCSEG00000008180rbms2b9469.914Cynoglossus_semilaevis
ENSEBUG00000015959-9368.684ENSCVAG00000013006rbms2b9371.225Cyprinodon_variegatus
ENSEBUG00000015959-8675.287ENSCVAG00000001635rbms2a9572.414Cyprinodon_variegatus
ENSEBUG00000015959-8673.926ENSDARG00000056150rbms2b8873.504Danio_rerio
ENSEBUG00000015959-8672.000ENSDARG00000044179rbms2a8972.000Danio_rerio
ENSEBUG00000015959-8660.111ENSDNOG00000011198RBMS28860.111Dasypus_novemcinctus
ENSEBUG00000015959-8559.322ENSDORG00000009231Rbms28659.322Dipodomys_ordii
ENSEBUG00000015959-6372.539ENSETEG00000010200RBMS26772.539Echinops_telfairi
ENSEBUG00000015959-8670.112ENSEASG00005005834RBMS28770.225Equus_asinus_asinus
ENSEBUG00000015959-8670.391ENSECAG00000013470RBMS28870.904Equus_caballus
ENSEBUG00000015959-9569.870ENSELUG00000019834rbms2a8873.429Esox_lucius
ENSEBUG00000015959-9666.154ENSELUG00000007892rbms2b9169.492Esox_lucius
ENSEBUG00000015959-8570.339ENSFCAG00000012028RBMS28770.339Felis_catus
ENSEBUG00000015959-8769.492ENSFDAG00000009949RBMS28669.741Fukomys_damarensis
ENSEBUG00000015959-8672.286ENSFHEG00000023377rbms2b8572.080Fundulus_heteroclitus
ENSEBUG00000015959-8675.862ENSFHEG00000022377rbms2a8775.429Fundulus_heteroclitus
ENSEBUG00000015959-9366.053ENSGMOG00000005250rbms2b8468.571Gadus_morhua
ENSEBUG00000015959-8567.723ENSGALG00000038757RBMS28867.723Gallus_gallus
ENSEBUG00000015959-8675.000ENSGAFG00000002548rbms2a9374.571Gambusia_affinis
ENSEBUG00000015959-8671.143ENSGAFG00000009648rbms2b8570.940Gambusia_affinis
ENSEBUG00000015959-8669.054ENSGACG00000009332rbms2b8568.272Gasterosteus_aculeatus
ENSEBUG00000015959-8675.287ENSGACG00000000617rbms2a8874.857Gasterosteus_aculeatus
ENSEBUG00000015959-8674.212ENSGAGG00000000381RBMS28773.789Gopherus_agassizii
ENSEBUG00000015959-5180.000ENSGGOG00000011570-10080.000Gorilla_gorilla
ENSEBUG00000015959-8567.246ENSGGOG00000028247-9264.638Gorilla_gorilla
ENSEBUG00000015959-8073.611ENSHBUG00000023230rbms2a9573.103Haplochromis_burtoni
ENSEBUG00000015959-9360.263ENSHBUG00000005313rbms2b9162.147Haplochromis_burtoni
ENSEBUG00000015959-8770.799ENSHGLG00000018238RBMS28771.751Heterocephalus_glaber_female
ENSEBUG00000015959-8770.799ENSHGLG00100011594RBMS28771.751Heterocephalus_glaber_male
ENSEBUG00000015959-7978.193ENSHCOG00000020072rbms2a8477.709Hippocampus_comes
ENSEBUG00000015959-9369.393ENSHCOG00000019929rbms2b8671.795Hippocampus_comes
ENSEBUG00000015959-8673.143ENSIPUG00000021323RBMS29570.655Ictalurus_punctatus
ENSEBUG00000015959-10065.526ENSIPUG00000001757rbms2a9574.539Ictalurus_punctatus
ENSEBUG00000015959-9465.985ENSSTOG00000013442RBMS28769.492Ictidomys_tridecemlineatus
ENSEBUG00000015959-9465.394ENSJJAG00000015940-8768.362Jaculus_jaculus
ENSEBUG00000015959-8566.856ENSJJAG00000015563-8766.856Jaculus_jaculus
ENSEBUG00000015959-8671.920ENSKMAG00000021167rbms2b8771.510Kryptolebias_marmoratus
ENSEBUG00000015959-8675.575ENSLBEG00000017716rbms2a8875.143Labrus_bergylta
ENSEBUG00000015959-8672.365ENSLBEG00000010843rbms2b9962.153Labrus_bergylta
ENSEBUG00000015959-9562.374ENSLACG00000018651RBMS28865.097Latimeria_chalumnae
ENSEBUG00000015959-8677.364ENSLOCG00000006148rbms2a8876.923Lepisosteus_oculatus
ENSEBUG00000015959-8672.206ENSLAFG00000008251RBMS28672.754Loxodonta_africana
ENSEBUG00000015959-8569.492ENSMFAG00000002049RBMS28769.492Macaca_fascicularis
ENSEBUG00000015959-8569.774ENSMMUG00000019330RBMS28769.774Macaca_mulatta
ENSEBUG00000015959-8569.774ENSMNEG00000035121RBMS28769.774Macaca_nemestrina
ENSEBUG00000015959-8569.774ENSMLEG00000032780RBMS28769.774Mandrillus_leucophaeus
ENSEBUG00000015959-9069.067ENSMAMG00000007264rbms2b8970.278Mastacembelus_armatus
ENSEBUG00000015959-8675.862ENSMAMG00000003821rbms2a9568.857Mastacembelus_armatus
ENSEBUG00000015959-8675.287ENSMZEG00005006839rbms2a8774.857Maylandia_zebra
ENSEBUG00000015959-9370.449ENSMZEG00005027195rbms2b8673.219Maylandia_zebra
ENSEBUG00000015959-6558.397ENSMAUG00000016984Rbms29858.397Mesocricetus_auratus
ENSEBUG00000015959-8570.141ENSMICG00000001075RBMS28770.141Microcebus_murinus
ENSEBUG00000015959-9464.844ENSMOCG00000015140Rbms28668.012Microtus_ochrogaster
ENSEBUG00000015959-8673.639ENSMMOG00000009177rbms2b9473.219Mola_mola
ENSEBUG00000015959-8662.500ENSMMOG00000021869rbms2a9562.147Mola_mola
ENSEBUG00000015959-8672.779ENSMALG00000014520rbms2b8572.365Monopterus_albus
ENSEBUG00000015959-8676.437ENSMALG00000016900rbms2a8776.000Monopterus_albus
ENSEBUG00000015959-8566.957MGP_CAROLIEiJ_G0015921Rbms28566.957Mus_caroli
ENSEBUG00000015959-8566.957ENSMUSG00000040043Rbms29266.957Mus_musculus
ENSEBUG00000015959-9464.675MGP_PahariEiJ_G0031163Rbms28667.052Mus_pahari
ENSEBUG00000015959-8566.957MGP_SPRETEiJ_G0016746Rbms28566.957Mus_spretus
ENSEBUG00000015959-9565.239ENSMPUG00000001490-8768.644Mustela_putorius_furo
ENSEBUG00000015959-8668.715ENSMLUG00000000530RBMS28768.644Myotis_lucifugus
ENSEBUG00000015959-8569.014ENSNGAG00000001476Rbms28768.732Nannospalax_galili
ENSEBUG00000015959-8675.575ENSNBRG00000019651rbms2a8775.143Neolamprologus_brichardi
ENSEBUG00000015959-8570.725ENSNBRG00000017934rbms2b8873.148Neolamprologus_brichardi
ENSEBUG00000015959-8668.994ENSNLEG00000017466RBMS28769.492Nomascus_leucogenys
ENSEBUG00000015959-8373.279ENSMEUG00000015616RBMS27481.132Notamacropus_eugenii
ENSEBUG00000015959-5489.216ENSOPRG00000001667RBMS25189.216Ochotona_princeps
ENSEBUG00000015959-8762.606ENSODEG00000006249RBMS28170.707Octodon_degus
ENSEBUG00000015959-8671.858ENSONIG00000019162rbms2a8776.780Oreochromis_niloticus
ENSEBUG00000015959-8671.788ENSONIG00000012198rbms2b8671.389Oreochromis_niloticus
ENSEBUG00000015959-8568.644ENSOCUG00000006073RBMS28768.644Oryctolagus_cuniculus
ENSEBUG00000015959-8173.636ENSORLG00000007807rbms2b8573.846Oryzias_latipes
ENSEBUG00000015959-8676.437ENSORLG00000015426rbms2a9576.000Oryzias_latipes
ENSEBUG00000015959-8870.868ENSORLG00020007010rbms2b8671.023Oryzias_latipes_hni
ENSEBUG00000015959-8676.149ENSORLG00020016803rbms2a9173.066Oryzias_latipes_hni
ENSEBUG00000015959-8676.437ENSORLG00015012519rbms2a9173.352Oryzias_latipes_hsok
ENSEBUG00000015959-8871.429ENSORLG00015022556rbms2b9071.591Oryzias_latipes_hsok
ENSEBUG00000015959-8676.149ENSOMEG00000021369rbms2a9575.714Oryzias_melastigma
ENSEBUG00000015959-8771.629ENSOMEG00000016468rbms2b9471.795Oryzias_melastigma
ENSEBUG00000015959-5166.986ENSOMEG00000014637-7966.986Oryzias_melastigma
ENSEBUG00000015959-8668.436ENSOGAG00000003534RBMS28768.539Otolemur_garnettii
ENSEBUG00000015959-8668.889ENSOARG00000008570RBMS28769.382Ovis_aries
ENSEBUG00000015959-8669.553ENSPPAG00000042975-8770.056Pan_paniscus
ENSEBUG00000015959-8668.436ENSPPAG00000033767-8968.927Pan_paniscus
ENSEBUG00000015959-8570.056ENSPPRG00000007678RBMS29965.233Panthera_pardus
ENSEBUG00000015959-8570.339ENSPTIG00000017925RBMS29965.591Panthera_tigris_altaica
ENSEBUG00000015959-8669.553ENSPTRG00000005104RBMS28770.056Pan_troglodytes
ENSEBUG00000015959-8569.774ENSPANG00000014113RBMS28769.774Papio_anubis
ENSEBUG00000015959-8674.571ENSPKIG00000006676rbms2a8874.571Paramormyrops_kingsleyae
ENSEBUG00000015959-8573.699ENSPMGG00000022594rbms2a8773.276Periophthalmus_magnuspinnatus
ENSEBUG00000015959-9465.051ENSPEMG00000012948Rbms28768.272Peromyscus_maniculatus_bairdii
ENSEBUG00000015959-7470.427ENSPMAG00000004916-10070.427Petromyzon_marinus
ENSEBUG00000015959-9676.429ENSPMAG00000004019-9776.429Petromyzon_marinus
ENSEBUG00000015959-9662.679ENSPMAG00000007358-9264.921Petromyzon_marinus
ENSEBUG00000015959-7471.947ENSPCIG00000018048RBMS210066.551Phascolarctos_cinereus
ENSEBUG00000015959-8675.575ENSPFOG00000002734rbms2a8775.143Poecilia_formosa
ENSEBUG00000015959-9364.524ENSPFOG00000002923rbms2b9365.395Poecilia_formosa
ENSEBUG00000015959-8675.575ENSPLAG00000001303rbms2a9075.143Poecilia_latipinna
ENSEBUG00000015959-9367.866ENSPLAG00000012535-8572.365Poecilia_latipinna
ENSEBUG00000015959-9354.000ENSPMEG00000015689rbms2b8768.165Poecilia_mexicana
ENSEBUG00000015959-8675.575ENSPMEG00000020550rbms2a8775.143Poecilia_mexicana
ENSEBUG00000015959-8666.857ENSPREG00000020560rbms2b9166.017Poecilia_reticulata
ENSEBUG00000015959-8073.611ENSPREG00000015038rbms2a8973.103Poecilia_reticulata
ENSEBUG00000015959-8669.553ENSPPYG00000004665RBMS28770.056Pongo_abelii
ENSEBUG00000015959-8661.732ENSPCAG00000010311RBMS28760.112Procavia_capensis
ENSEBUG00000015959-8670.112ENSPCOG00000016699-8770.621Propithecus_coquereli
ENSEBUG00000015959-6658.273ENSPCOG00000014899-10058.273Propithecus_coquereli
ENSEBUG00000015959-8669.748ENSPVAG00000007616RBMS28770.255Pteropus_vampyrus
ENSEBUG00000015959-8675.575ENSPNYG00000020829rbms2a8775.143Pundamilia_nyererei
ENSEBUG00000015959-9370.712ENSPNYG00000017656rbms2b8673.504Pundamilia_nyererei
ENSEBUG00000015959-9570.649ENSPNAG00000000408rbms2a8775.143Pygocentrus_nattereri
ENSEBUG00000015959-8674.785ENSPNAG00000019569rbms2b9571.510Pygocentrus_nattereri
ENSEBUG00000015959-9464.583ENSRNOG00000003076Rbms28768.644Rattus_norvegicus
ENSEBUG00000015959-8669.274ENSRBIG00000036293RBMS28769.774Rhinopithecus_bieti
ENSEBUG00000015959-8669.274ENSRROG00000044831RBMS29469.774Rhinopithecus_roxellana
ENSEBUG00000015959-8563.557ENSSBOG00000028640RBMS28284.974Saimiri_boliviensis_boliviensis
ENSEBUG00000015959-5183.810ENSSHAG00000004939RBMS28783.019Sarcophilus_harrisii
ENSEBUG00000015959-8675.358ENSSFOG00015006642-9273.669Scleropages_formosus
ENSEBUG00000015959-8675.287ENSSFOG00015015788rbms2a9571.429Scleropages_formosus
ENSEBUG00000015959-9370.866ENSSMAG00000004221rbms2b8774.359Scophthalmus_maximus
ENSEBUG00000015959-8672.701ENSSMAG00000003683rbms2a9671.875Scophthalmus_maximus
ENSEBUG00000015959-8674.499ENSSDUG00000013574rbms2b8574.074Seriola_dumerili
ENSEBUG00000015959-8676.437ENSSDUG00000005666rbms2a9274.688Seriola_dumerili
ENSEBUG00000015959-8676.437ENSSLDG00000003394rbms2a9274.688Seriola_lalandi_dorsalis
ENSEBUG00000015959-8674.499ENSSLDG00000004447rbms2b9173.457Seriola_lalandi_dorsalis
ENSEBUG00000015959-6886.154ENSSARG00000012553RBMS26886.154Sorex_araneus
ENSEBUG00000015959-8676.437ENSSPAG00000000639rbms2a9572.571Stegastes_partitus
ENSEBUG00000015959-8673.352ENSSPAG00000022418rbms2b8572.934Stegastes_partitus
ENSEBUG00000015959-8669.553ENSSSCG00000000402RBMS28770.056Sus_scrofa
ENSEBUG00000015959-8673.851ENSTRUG00000008492rbms2a8773.429Takifugu_rubripes
ENSEBUG00000015959-8970.166ENSTRUG00000006839rbms2b9270.940Takifugu_rubripes
ENSEBUG00000015959-8971.271ENSTNIG00000015056rbms2b8872.365Tetraodon_nigroviridis
ENSEBUG00000015959-8670.959ENSTNIG00000014563rbms2a8970.572Tetraodon_nigroviridis
ENSEBUG00000015959-6683.439ENSTBEG00000009515RBMS26483.439Tupaia_belangeri
ENSEBUG00000015959-9562.025ENSTTRG00000002117RBMS28765.537Tursiops_truncatus
ENSEBUG00000015959-8569.492ENSUAMG00000021435RBMS28969.492Ursus_americanus
ENSEBUG00000015959-7970.695ENSUMAG00000017426RBMS28073.026Ursus_maritimus
ENSEBUG00000015959-7971.601ENSVPAG00000004022RBMS28771.601Vicugna_pacos
ENSEBUG00000015959-8668.715ENSVVUG00000021554RBMS28769.209Vulpes_vulpes
ENSEBUG00000015959-8570.879ENSXETG00000021787rbms29970.879Xenopus_tropicalis
ENSEBUG00000015959-7974.613ENSXCOG00000006995rbms2b8974.383Xiphophorus_couchianus
ENSEBUG00000015959-8664.183ENSXCOG00000018635rbms2a9968.539Xiphophorus_couchianus
ENSEBUG00000015959-8675.575ENSXMAG00000002318rbms2a9575.143Xiphophorus_maculatus
ENSEBUG00000015959-8672.000ENSXMAG00000011428rbms2b9371.795Xiphophorus_maculatus

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