EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000015962 (Gene tree)
Gene ID: -
Gene Symbol: dkc1 (1 of many)
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 10706 bases
Position: chrFYBX02010127.1:2053349-2064054
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000025906	TruB_N	PF01509.18	1.1e-23	1	1
ENSEBUP00000025893	TruB_N	PF01509.18	2.1e-23	1	1
ENSEBUP00000025906	PUA	PF01472.20	4.5e-14	1	1
ENSEBUP00000025893	PUA	PF01472.20	6.1e-14	1	1
ENSEBUP00000025893	DKCLD	PF08068.12	3.3e-31	1	1
ENSEBUP00000025906	DKCLD	PF08068.12	3.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026482	-	3125	-	ENSEBUP00000025906	296 (aa)	-	-
ENSEBUT00000026469	-	2449	-	ENSEBUP00000025893	351 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000015962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000015962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000015962	dkc1	99	81.911	ENSG00000130826	DKC1	99	74.561	Homo_sapiens
ENSEBUG00000015962	dkc1	98	81.787	ENSAPOG00000007799	dkc1	65	77.946	Acanthochromis_polyacanthus
ENSEBUG00000015962	dkc1	99	82.253	ENSAMEG00000002776	DKC1	67	78.107	Ailuropoda_melanoleuca
ENSEBUG00000015962	dkc1	98	81.787	ENSACIG00000022614	dkc1	85	73.381	Amphilophus_citrinellus
ENSEBUG00000015962	dkc1	98	81.443	ENSAOCG00000013159	dkc1	65	79.688	Amphiprion_ocellaris
ENSEBUG00000015962	dkc1	98	81.443	ENSAPEG00000002284	dkc1	67	78.116	Amphiprion_percula
ENSEBUG00000015962	dkc1	98	79.530	ENSATEG00000013682	dkc1	66	75.893	Anabas_testudineus
ENSEBUG00000015962	dkc1	98	81.100	ENSACAG00000015600	DKC1	57	77.576	Anolis_carolinensis
ENSEBUG00000015962	dkc1	99	81.570	ENSANAG00000022732	DKC1	66	77.515	Aotus_nancymaae
ENSEBUG00000015962	dkc1	98	82.131	ENSACLG00000015605	dkc1	67	78.116	Astatotilapia_calliptera
ENSEBUG00000015962	dkc1	98	81.787	ENSAMXG00000017108	dkc1	66	77.910	Astyanax_mexicanus
ENSEBUG00000015962	dkc1	99	82.253	ENSBTAG00000013045	DKC1	67	77.811	Bos_taurus
ENSEBUG00000015962	dkc1	99	69.283	WBGene00010478	K01G5.5	72	66.250	Caenorhabditis_elegans
ENSEBUG00000015962	dkc1	99	81.911	ENSCJAG00000004210	DKC1	85	72.862	Callithrix_jacchus
ENSEBUG00000015962	dkc1	99	81.911	ENSCAFG00000019620	-	65	77.811	Canis_familiaris
ENSEBUG00000015962	dkc1	99	72.014	ENSCAFG00000009311	-	62	71.250	Canis_familiaris
ENSEBUG00000015962	dkc1	99	70.648	ENSCAFG00020009379	-	60	70.000	Canis_lupus_dingo
ENSEBUG00000015962	dkc1	99	81.911	ENSCAFG00020008918	-	65	77.811	Canis_lupus_dingo
ENSEBUG00000015962	dkc1	99	82.253	ENSCHIG00000017392	DKC1	67	78.107	Capra_hircus
ENSEBUG00000015962	dkc1	99	82.594	ENSTSYG00000007681	DKC1	66	77.616	Carlito_syrichta
ENSEBUG00000015962	dkc1	98	82.353	ENSCAPG00000003342	DKC1	66	82.353	Cavia_aperea
ENSEBUG00000015962	dkc1	99	82.253	ENSCPOG00000008825	DKC1	66	78.107	Cavia_porcellus
ENSEBUG00000015962	dkc1	99	68.601	ENSCCAG00000027418	DKC1	63	66.272	Cebus_capucinus
ENSEBUG00000015962	dkc1	99	81.911	ENSCATG00000033602	DKC1	66	77.811	Cercocebus_atys
ENSEBUG00000015962	dkc1	99	82.253	ENSCLAG00000000720	DKC1	67	77.811	Chinchilla_lanigera
ENSEBUG00000015962	dkc1	99	81.911	ENSCSAG00000006706	DKC1	66	77.811	Chlorocebus_sabaeus
ENSEBUG00000015962	dkc1	99	81.229	ENSCPBG00000005858	DKC1	68	80.000	Chrysemys_picta_bellii
ENSEBUG00000015962	dkc1	99	77.474	ENSCING00000004599	-	65	72.754	Ciona_intestinalis
ENSEBUG00000015962	dkc1	99	79.181	ENSCSAVG00000010047	-	75	73.512	Ciona_savignyi
ENSEBUG00000015962	dkc1	99	81.911	ENSCANG00000027987	DKC1	66	77.811	Colobus_angolensis_palliatus
ENSEBUG00000015962	dkc1	99	81.911	ENSCGRG00001014574	-	66	77.811	Cricetulus_griseus_chok1gshd
ENSEBUG00000015962	dkc1	99	60.616	ENSCGRG00001016789	-	71	59.215	Cricetulus_griseus_chok1gshd
ENSEBUG00000015962	dkc1	99	81.911	ENSCGRG00000016075	-	66	77.811	Cricetulus_griseus_crigri
ENSEBUG00000015962	dkc1	99	60.616	ENSCGRG00000014809	-	69	59.215	Cricetulus_griseus_crigri
ENSEBUG00000015962	dkc1	99	80.887	ENSCSEG00000012633	dkc1	70	77.273	Cynoglossus_semilaevis
ENSEBUG00000015962	dkc1	98	79.725	ENSCVAG00000010155	dkc1	62	78.302	Cyprinodon_variegatus
ENSEBUG00000015962	dkc1	98	82.818	ENSDARG00000016484	dkc1	65	79.635	Danio_rerio
ENSEBUG00000015962	dkc1	99	82.253	ENSDNOG00000004218	DKC1	66	78.107	Dasypus_novemcinctus
ENSEBUG00000015962	dkc1	83	66.397	ENSDORG00000013566	-	97	63.356	Dipodomys_ordii
ENSEBUG00000015962	dkc1	99	74.061	FBgn0259937	Nop60B	87	68.687	Drosophila_melanogaster
ENSEBUG00000015962	dkc1	99	81.570	ENSETEG00000016095	DKC1	67	78.614	Echinops_telfairi
ENSEBUG00000015962	dkc1	99	82.253	ENSEASG00005007484	DKC1	65	78.107	Equus_asinus_asinus
ENSEBUG00000015962	dkc1	99	82.253	ENSECAG00000023524	DKC1	65	78.107	Equus_caballus
ENSEBUG00000015962	dkc1	99	80.887	ENSEEUG00000003323	DKC1	74	78.549	Erinaceus_europaeus
ENSEBUG00000015962	dkc1	99	80.887	ENSELUG00000014538	dkc1	67	77.946	Esox_lucius
ENSEBUG00000015962	dkc1	99	82.253	ENSFCAG00000006577	DKC1	67	78.402	Felis_catus
ENSEBUG00000015962	dkc1	99	80.268	ENSFALG00000011496	DKC1	66	77.101	Ficedula_albicollis
ENSEBUG00000015962	dkc1	99	82.594	ENSFDAG00000002516	DKC1	68	78.571	Fukomys_damarensis
ENSEBUG00000015962	dkc1	98	80.756	ENSFHEG00000004627	dkc1	66	75.988	Fundulus_heteroclitus
ENSEBUG00000015962	dkc1	98	80.623	ENSGMOG00000017277	dkc1	81	76.415	Gadus_morhua
ENSEBUG00000015962	dkc1	99	82.253	ENSGALG00000005054	DKC1	66	78.466	Gallus_gallus
ENSEBUG00000015962	dkc1	98	81.100	ENSGAFG00000011486	dkc1	57	76.900	Gambusia_affinis
ENSEBUG00000015962	dkc1	98	81.443	ENSGACG00000004373	dkc1	85	81.315	Gasterosteus_aculeatus
ENSEBUG00000015962	dkc1	99	81.570	ENSGAGG00000011330	DKC1	62	80.312	Gopherus_agassizii
ENSEBUG00000015962	dkc1	99	81.911	ENSGGOG00000001045	DKC1	66	77.811	Gorilla_gorilla
ENSEBUG00000015962	dkc1	98	82.474	ENSHBUG00000012436	dkc1	66	78.419	Haplochromis_burtoni
ENSEBUG00000015962	dkc1	99	81.229	ENSHGLG00000000649	DKC1	65	77.219	Heterocephalus_glaber_female
ENSEBUG00000015962	dkc1	99	81.229	ENSHGLG00100001153	DKC1	66	77.219	Heterocephalus_glaber_male
ENSEBUG00000015962	dkc1	98	81.100	ENSHCOG00000021099	dkc1	66	77.477	Hippocampus_comes
ENSEBUG00000015962	dkc1	98	81.100	ENSIPUG00000010309	dkc1	62	80.251	Ictalurus_punctatus
ENSEBUG00000015962	dkc1	99	73.720	ENSSTOG00000020149	-	65	71.131	Ictidomys_tridecemlineatus
ENSEBUG00000015962	dkc1	99	82.253	ENSSTOG00000001074	-	69	78.107	Ictidomys_tridecemlineatus
ENSEBUG00000015962	dkc1	99	72.355	ENSSTOG00000011904	-	63	69.231	Ictidomys_tridecemlineatus
ENSEBUG00000015962	dkc1	83	67.206	ENSJJAG00000010086	-	97	64.948	Jaculus_jaculus
ENSEBUG00000015962	dkc1	98	78.694	ENSKMAG00000008010	dkc1	66	74.772	Kryptolebias_marmoratus
ENSEBUG00000015962	dkc1	98	81.100	ENSLBEG00000019122	dkc1	69	76.190	Labrus_bergylta
ENSEBUG00000015962	dkc1	99	78.498	ENSLACG00000014025	DKC1	73	78.125	Latimeria_chalumnae
ENSEBUG00000015962	dkc1	99	82.253	ENSLOCG00000013713	dkc1	65	82.692	Lepisosteus_oculatus
ENSEBUG00000015962	dkc1	99	81.911	ENSLAFG00000000221	DKC1	65	78.916	Loxodonta_africana
ENSEBUG00000015962	dkc1	99	81.911	ENSMFAG00000032398	DKC1	57	77.811	Macaca_fascicularis
ENSEBUG00000015962	dkc1	99	81.911	ENSMMUG00000005768	DKC1	66	77.811	Macaca_mulatta
ENSEBUG00000015962	dkc1	99	81.911	ENSMNEG00000034503	DKC1	66	77.811	Macaca_nemestrina
ENSEBUG00000015962	dkc1	99	81.911	ENSMLEG00000034422	DKC1	66	77.811	Mandrillus_leucophaeus
ENSEBUG00000015962	dkc1	98	82.818	ENSMAMG00000005427	dkc1	73	79.268	Mastacembelus_armatus
ENSEBUG00000015962	dkc1	98	82.131	ENSMZEG00005014503	dkc1	66	78.116	Maylandia_zebra
ENSEBUG00000015962	dkc1	98	82.007	ENSMGAG00000009238	DKC1	63	82.007	Meleagris_gallopavo
ENSEBUG00000015962	dkc1	83	66.802	ENSMAUG00000016454	-	97	64.384	Mesocricetus_auratus
ENSEBUG00000015962	dkc1	99	81.911	ENSMICG00000038751	-	77	76.587	Microcebus_murinus
ENSEBUG00000015962	dkc1	98	69.416	ENSMICG00000002818	-	77	66.897	Microcebus_murinus
ENSEBUG00000015962	dkc1	83	63.968	ENSMOCG00000001169	-	97	60.959	Microtus_ochrogaster
ENSEBUG00000015962	dkc1	98	80.412	ENSMMOG00000020348	dkc1	74	75.367	Mola_mola
ENSEBUG00000015962	dkc1	99	80.546	ENSMODG00000009243	DKC1	56	79.688	Monodelphis_domestica
ENSEBUG00000015962	dkc1	98	82.131	ENSMALG00000009454	dkc1	65	77.812	Monopterus_albus
ENSEBUG00000015962	dkc1	99	67.774	MGP_CAROLIEiJ_G0033191	Dkc1	95	74.820	Mus_caroli
ENSEBUG00000015962	dkc1	99	81.911	ENSMUSG00000031403	Dkc1	97	64.605	Mus_musculus
ENSEBUG00000015962	dkc1	99	81.570	MGP_PahariEiJ_G0031735	Dkc1	97	64.261	Mus_pahari
ENSEBUG00000015962	dkc1	99	81.911	MGP_SPRETEiJ_G0034351	Dkc1	97	64.605	Mus_spretus
ENSEBUG00000015962	dkc1	99	82.253	ENSMPUG00000016136	DKC1	63	78.107	Mustela_putorius_furo
ENSEBUG00000015962	dkc1	95	80.714	ENSMLUG00000011918	DKC1	63	76.308	Myotis_lucifugus
ENSEBUG00000015962	dkc1	83	67.206	ENSNGAG00000015724	-	97	64.605	Nannospalax_galili
ENSEBUG00000015962	dkc1	98	82.131	ENSNBRG00000005638	dkc1	66	78.116	Neolamprologus_brichardi
ENSEBUG00000015962	dkc1	99	81.911	ENSNLEG00000014323	DKC1	66	77.811	Nomascus_leucogenys
ENSEBUG00000015962	dkc1	93	81.022	ENSMEUG00000001066	DKC1	66	80.399	Notamacropus_eugenii
ENSEBUG00000015962	dkc1	88	83.784	ENSOPRG00000005248	DKC1	67	71.598	Ochotona_princeps
ENSEBUG00000015962	dkc1	99	81.570	ENSODEG00000011816	-	67	77.126	Octodon_degus
ENSEBUG00000015962	dkc1	83	67.206	ENSODEG00000000549	-	97	64.726	Octodon_degus
ENSEBUG00000015962	dkc1	98	81.787	ENSONIG00000013889	dkc1	66	77.812	Oreochromis_niloticus
ENSEBUG00000015962	dkc1	99	81.570	ENSOANG00000008713	-	64	81.410	Ornithorhynchus_anatinus
ENSEBUG00000015962	dkc1	99	82.253	ENSOCUG00000012646	DKC1	65	78.916	Oryctolagus_cuniculus
ENSEBUG00000015962	dkc1	98	81.443	ENSORLG00000018748	dkc1	65	76.900	Oryzias_latipes
ENSEBUG00000015962	dkc1	98	81.443	ENSOMEG00000005786	dkc1	85	74.899	Oryzias_melastigma
ENSEBUG00000015962	dkc1	99	82.253	ENSOGAG00000003399	DKC1	65	77.811	Otolemur_garnettii
ENSEBUG00000015962	dkc1	99	82.253	ENSOARG00000003047	DKC1	67	78.402	Ovis_aries
ENSEBUG00000015962	dkc1	99	81.911	ENSPPAG00000023820	DKC1	66	77.811	Pan_paniscus
ENSEBUG00000015962	dkc1	99	82.253	ENSPPRG00000009104	DKC1	67	78.402	Panthera_pardus
ENSEBUG00000015962	dkc1	99	82.253	ENSPTIG00000017469	DKC1	70	77.681	Panthera_tigris_altaica
ENSEBUG00000015962	dkc1	99	81.911	ENSPTRG00000043416	-	57	77.811	Pan_troglodytes
ENSEBUG00000015962	dkc1	99	81.911	ENSPTRG00000022449	DKC1	66	77.811	Pan_troglodytes
ENSEBUG00000015962	dkc1	99	81.911	ENSPANG00000011978	DKC1	66	77.811	Papio_anubis
ENSEBUG00000015962	dkc1	99	83.276	ENSPKIG00000008443	dkc1	68	81.931	Paramormyrops_kingsleyae
ENSEBUG00000015962	dkc1	99	81.570	ENSPSIG00000013765	DKC1	76	80.189	Pelodiscus_sinensis
ENSEBUG00000015962	dkc1	98	78.351	ENSPMGG00000004097	dkc1	60	76.292	Periophthalmus_magnuspinnatus
ENSEBUG00000015962	dkc1	77	54.694	ENSPEMG00000013348	Dkc1	60	83.333	Peromyscus_maniculatus_bairdii
ENSEBUG00000015962	dkc1	99	80.546	ENSPCIG00000016706	DKC1	56	77.778	Phascolarctos_cinereus
ENSEBUG00000015962	dkc1	98	81.100	ENSPFOG00000018653	dkc1	66	76.900	Poecilia_formosa
ENSEBUG00000015962	dkc1	98	81.100	ENSPLAG00000003272	dkc1	59	76.900	Poecilia_latipinna
ENSEBUG00000015962	dkc1	98	81.100	ENSPMEG00000010413	dkc1	66	76.900	Poecilia_mexicana
ENSEBUG00000015962	dkc1	98	81.100	ENSPREG00000004100	dkc1	67	74.344	Poecilia_reticulata
ENSEBUG00000015962	dkc1	99	81.911	ENSPPYG00000020892	DKC1	66	77.811	Pongo_abelii
ENSEBUG00000015962	dkc1	98	82.353	ENSPCAG00000015034	DKC1	56	82.353	Procavia_capensis
ENSEBUG00000015962	dkc1	99	82.253	ENSPCOG00000026874	DKC1	66	78.107	Propithecus_coquereli
ENSEBUG00000015962	dkc1	99	81.570	ENSPVAG00000009222	DKC1	68	77.219	Pteropus_vampyrus
ENSEBUG00000015962	dkc1	98	82.131	ENSPNYG00000020063	dkc1	66	78.116	Pundamilia_nyererei
ENSEBUG00000015962	dkc1	98	80.412	ENSPNAG00000005780	dkc1	69	75.145	Pygocentrus_nattereri
ENSEBUG00000015962	dkc1	99	78.425	ENSRNOG00000055562	Dkc1	66	73.669	Rattus_norvegicus
ENSEBUG00000015962	dkc1	99	81.911	ENSRBIG00000028457	DKC1	57	77.811	Rhinopithecus_bieti
ENSEBUG00000015962	dkc1	99	81.911	ENSRROG00000044780	DKC1	66	77.811	Rhinopithecus_roxellana
ENSEBUG00000015962	dkc1	99	70.990	YLR175W	-	65	70.513	Saccharomyces_cerevisiae
ENSEBUG00000015962	dkc1	99	81.911	ENSSBOG00000033746	DKC1	66	77.811	Saimiri_boliviensis_boliviensis
ENSEBUG00000015962	dkc1	99	80.546	ENSSHAG00000002463	DKC1	70	76.877	Sarcophilus_harrisii
ENSEBUG00000015962	dkc1	99	81.911	ENSSFOG00015009585	dkc1	63	80.997	Scleropages_formosus
ENSEBUG00000015962	dkc1	98	81.443	ENSSMAG00000002552	dkc1	64	80.063	Scophthalmus_maximus
ENSEBUG00000015962	dkc1	98	82.131	ENSSDUG00000009963	dkc1	66	78.419	Seriola_dumerili
ENSEBUG00000015962	dkc1	98	82.131	ENSSLDG00000019342	dkc1	69	78.419	Seriola_lalandi_dorsalis
ENSEBUG00000015962	dkc1	99	76.792	ENSSARG00000001822	DKC1	67	73.373	Sorex_araneus
ENSEBUG00000015962	dkc1	99	80.887	ENSSPUG00000018907	DKC1	61	79.375	Sphenodon_punctatus
ENSEBUG00000015962	dkc1	98	80.756	ENSSPAG00000002585	dkc1	63	76.737	Stegastes_partitus
ENSEBUG00000015962	dkc1	99	82.253	ENSSSCG00000012823	DKC1	71	78.107	Sus_scrofa
ENSEBUG00000015962	dkc1	98	82.699	ENSTGUG00000006781	DKC1	64	82.699	Taeniopygia_guttata
ENSEBUG00000015962	dkc1	98	81.443	ENSTRUG00000004413	dkc1	66	78.116	Takifugu_rubripes
ENSEBUG00000015962	dkc1	98	59.797	ENSTNIG00000002582	dkc1	66	56.522	Tetraodon_nigroviridis
ENSEBUG00000015962	dkc1	66	78.571	ENSTBEG00000011262	DKC1	54	78.571	Tupaia_belangeri
ENSEBUG00000015962	dkc1	85	81.746	ENSTTRG00000008089	DKC1	55	80.866	Tursiops_truncatus
ENSEBUG00000015962	dkc1	99	82.253	ENSUAMG00000022721	DKC1	81	77.108	Ursus_americanus
ENSEBUG00000015962	dkc1	99	81.570	ENSUMAG00000016899	DKC1	81	76.305	Ursus_maritimus
ENSEBUG00000015962	dkc1	99	63.823	ENSVVUG00000021671	-	58	63.551	Vulpes_vulpes
ENSEBUG00000015962	dkc1	99	80.000	ENSVVUG00000020734	-	59	76.232	Vulpes_vulpes
ENSEBUG00000015962	dkc1	99	80.546	ENSXETG00000032517	DKC1	66	78.916	Xenopus_tropicalis
ENSEBUG00000015962	dkc1	98	80.412	ENSXCOG00000005498	dkc1	68	78.616	Xiphophorus_couchianus
ENSEBUG00000015962	dkc1	98	80.412	ENSXMAG00000004919	dkc1	69	73.699	Xiphophorus_maculatus