EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016040 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 125856 bases
Position: chrFYBX02010718.1:1140173-1266028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026080	IBN_N	PF03810.19	1.6e-13	1	1
ENSEBUP00000026108	IBN_N	PF03810.19	1.7e-13	1	1
ENSEBUP00000026032	IBN_N	PF03810.19	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026608	-	2757	-	ENSEBUP00000026032	897 (aa)	-	-
ENSEBUT00000026656	-	3193	-	ENSEBUP00000026080	928 (aa)	-	-
ENSEBUT00000026684	-	3109	-	ENSEBUP00000026108	900 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016040	-	99	60.261	ENSEBUG00000003477	ipo7	85	61.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016040	-	99	67.756	ENSG00000205339	IPO7	99	59.690	Homo_sapiens
ENSEBUG00000016040	-	99	66.892	ENSAPOG00000014238	ipo7	85	67.841	Acanthochromis_polyacanthus
ENSEBUG00000016040	-	99	67.604	ENSAMEG00000003914	IPO7	89	67.427	Ailuropoda_melanoleuca
ENSEBUG00000016040	-	95	68.160	ENSACIG00000000608	ipo7	89	67.841	Amphilophus_citrinellus
ENSEBUG00000016040	-	99	66.892	ENSAOCG00000009342	ipo7	88	67.384	Amphiprion_ocellaris
ENSEBUG00000016040	-	99	66.892	ENSAPEG00000009820	ipo7	88	67.841	Amphiprion_percula
ENSEBUG00000016040	-	99	66.441	ENSATEG00000006501	ipo7	85	67.273	Anabas_testudineus
ENSEBUG00000016040	-	99	67.450	ENSAPLG00000016161	IPO7	84	69.340	Anas_platyrhynchos
ENSEBUG00000016040	-	99	68.095	ENSACAG00000009452	IPO7	89	67.791	Anolis_carolinensis
ENSEBUG00000016040	-	99	67.756	ENSANAG00000037854	IPO7	89	67.573	Aotus_nancymaae
ENSEBUG00000016040	-	68	60.099	ENSACLG00000026148	-	87	60.099	Astatotilapia_calliptera
ENSEBUG00000016040	-	99	66.779	ENSACLG00000027247	ipo7	85	67.614	Astatotilapia_calliptera
ENSEBUG00000016040	-	99	60.398	ENSAMXG00000009895	ipo7	84	61.369	Astyanax_mexicanus
ENSEBUG00000016040	-	99	67.756	ENSBTAG00000027722	IPO7	89	67.573	Bos_taurus
ENSEBUG00000016040	-	99	67.756	ENSCJAG00000011395	IPO7	89	67.573	Callithrix_jacchus
ENSEBUG00000016040	-	99	67.756	ENSCAFG00000007259	IPO7	89	67.573	Canis_familiaris
ENSEBUG00000016040	-	98	68.114	ENSCAFG00020011426	IPO7	88	68.114	Canis_lupus_dingo
ENSEBUG00000016040	-	99	67.644	ENSCHIG00000024527	IPO7	89	67.465	Capra_hircus
ENSEBUG00000016040	-	99	67.869	ENSTSYG00000004959	IPO7	89	67.682	Carlito_syrichta
ENSEBUG00000016040	-	99	67.756	ENSCPOG00000013623	IPO7	89	67.573	Cavia_porcellus
ENSEBUG00000016040	-	95	63.090	ENSCCAG00000020955	IPO7	90	63.068	Cebus_capucinus
ENSEBUG00000016040	-	99	62.796	ENSCATG00000042452	IPO7	84	65.922	Cercocebus_atys
ENSEBUG00000016040	-	99	67.869	ENSCLAG00000015913	IPO7	89	67.682	Chinchilla_lanigera
ENSEBUG00000016040	-	99	67.756	ENSCSAG00000004504	IPO7	89	67.573	Chlorocebus_sabaeus
ENSEBUG00000016040	-	99	68.095	ENSCPBG00000022842	IPO7	87	67.900	Chrysemys_picta_bellii
ENSEBUG00000016040	-	99	50.715	ENSCING00000008592	-	84	51.790	Ciona_intestinalis
ENSEBUG00000016040	-	99	52.908	ENSCSAVG00000011751	-	90	49.200	Ciona_savignyi
ENSEBUG00000016040	-	99	66.506	ENSCANG00000032804	IPO7	88	66.219	Colobus_angolensis_palliatus
ENSEBUG00000016040	-	99	67.756	ENSCGRG00001019770	Ipo7	89	67.573	Cricetulus_griseus_chok1gshd
ENSEBUG00000016040	-	99	67.756	ENSCGRG00000016689	Ipo7	89	67.573	Cricetulus_griseus_crigri
ENSEBUG00000016040	-	99	66.779	ENSCSEG00000009451	ipo7	85	67.727	Cynoglossus_semilaevis
ENSEBUG00000016040	-	99	66.104	ENSCVAG00000017260	ipo7	85	67.045	Cyprinodon_variegatus
ENSEBUG00000016040	-	99	66.892	ENSDARG00000035751	ipo7	85	67.386	Danio_rerio
ENSEBUG00000016040	-	99	67.644	ENSDNOG00000016138	IPO7	89	67.465	Dasypus_novemcinctus
ENSEBUG00000016040	-	99	67.869	ENSDORG00000013699	Ipo7	89	67.682	Dipodomys_ordii
ENSEBUG00000016040	-	99	50.337	FBgn0026252	msk	84	51.357	Drosophila_melanogaster
ENSEBUG00000016040	-	91	64.312	ENSETEG00000001023	IPO7	81	64.312	Echinops_telfairi
ENSEBUG00000016040	-	98	68.000	ENSEASG00005003575	IPO7	88	68.000	Equus_asinus_asinus
ENSEBUG00000016040	-	99	67.756	ENSECAG00000015965	IPO7	89	67.573	Equus_caballus
ENSEBUG00000016040	-	82	64.615	ENSEEUG00000014059	IPO7	74	64.615	Erinaceus_europaeus
ENSEBUG00000016040	-	99	66.629	ENSELUG00000007853	ipo7	92	64.309	Esox_lucius
ENSEBUG00000016040	-	99	67.756	ENSFCAG00000030327	IPO7	89	67.573	Felis_catus
ENSEBUG00000016040	-	98	68.343	ENSFALG00000000979	IPO7	88	68.343	Ficedula_albicollis
ENSEBUG00000016040	-	99	67.644	ENSFDAG00000011342	IPO7	89	67.465	Fukomys_damarensis
ENSEBUG00000016040	-	99	64.374	ENSFHEG00000007582	ipo7	90	64.200	Fundulus_heteroclitus
ENSEBUG00000016040	-	89	67.358	ENSGMOG00000001681	ipo7	86	67.358	Gadus_morhua
ENSEBUG00000016040	-	99	68.095	ENSGALG00000005807	IPO7	89	67.900	Gallus_gallus
ENSEBUG00000016040	-	99	66.104	ENSGAFG00000017037	ipo7	85	67.045	Gambusia_affinis
ENSEBUG00000016040	-	99	66.441	ENSGACG00000015677	ipo7	85	67.386	Gasterosteus_aculeatus
ENSEBUG00000016040	-	99	67.982	ENSGAGG00000020412	IPO7	87	67.791	Gopherus_agassizii
ENSEBUG00000016040	-	95	52.781	ENSGGOG00000026484	-	96	42.667	Gorilla_gorilla
ENSEBUG00000016040	-	99	67.756	ENSGGOG00000002260	IPO7	88	67.756	Gorilla_gorilla
ENSEBUG00000016040	-	99	66.892	ENSHBUG00000017323	ipo7	88	67.727	Haplochromis_burtoni
ENSEBUG00000016040	-	99	67.756	ENSHGLG00000005147	IPO7	89	67.573	Heterocephalus_glaber_female
ENSEBUG00000016040	-	93	52.500	ENSHGLG00000000256	-	85	52.500	Heterocephalus_glaber_female
ENSEBUG00000016040	-	99	67.756	ENSHGLG00100013871	IPO7	90	67.573	Heterocephalus_glaber_male
ENSEBUG00000016040	-	93	52.738	ENSHGLG00100017940	-	85	52.738	Heterocephalus_glaber_male
ENSEBUG00000016040	-	99	65.878	ENSHCOG00000002290	ipo7	85	67.045	Hippocampus_comes
ENSEBUG00000016040	-	99	66.667	ENSIPUG00000020136	ipo7	88	67.386	Ictalurus_punctatus
ENSEBUG00000016040	-	99	67.644	ENSSTOG00000009601	IPO7	89	67.465	Ictidomys_tridecemlineatus
ENSEBUG00000016040	-	99	63.991	ENSJJAG00000018743	Ipo7	88	63.991	Jaculus_jaculus
ENSEBUG00000016040	-	99	66.667	ENSKMAG00000004961	ipo7	85	67.386	Kryptolebias_marmoratus
ENSEBUG00000016040	-	99	66.779	ENSLBEG00000027402	ipo7	88	67.614	Labrus_bergylta
ENSEBUG00000016040	-	99	67.684	ENSLACG00000017593	IPO7	89	67.101	Latimeria_chalumnae
ENSEBUG00000016040	-	99	68.166	ENSLOCG00000003606	ipo7	89	67.861	Lepisosteus_oculatus
ENSEBUG00000016040	-	99	67.418	ENSLAFG00000014194	IPO7	89	67.247	Loxodonta_africana
ENSEBUG00000016040	-	92	68.624	ENSMFAG00000040326	IPO7	88	68.312	Macaca_fascicularis
ENSEBUG00000016040	-	99	61.371	ENSMMUG00000023636	IPO7	88	61.413	Macaca_mulatta
ENSEBUG00000016040	-	99	67.756	ENSMNEG00000034866	IPO7	89	67.573	Macaca_nemestrina
ENSEBUG00000016040	-	99	67.756	ENSMLEG00000043163	IPO7	89	67.573	Mandrillus_leucophaeus
ENSEBUG00000016040	-	99	66.104	ENSMAMG00000021798	ipo7	88	67.045	Mastacembelus_armatus
ENSEBUG00000016040	-	99	66.779	ENSMZEG00005015042	ipo7	85	67.614	Maylandia_zebra
ENSEBUG00000016040	-	99	67.942	ENSMGAG00000006243	IPO7	86	67.942	Meleagris_gallopavo
ENSEBUG00000016040	-	85	64.409	ENSMAUG00000014758	Ipo7	85	64.409	Mesocricetus_auratus
ENSEBUG00000016040	-	99	67.756	ENSMICG00000007465	IPO7	89	67.573	Microcebus_murinus
ENSEBUG00000016040	-	99	67.756	ENSMOCG00000005483	Ipo7	89	67.573	Microtus_ochrogaster
ENSEBUG00000016040	-	99	62.838	ENSMMOG00000017072	ipo7	84	63.864	Mola_mola
ENSEBUG00000016040	-	99	67.644	ENSMODG00000007836	IPO7	89	67.465	Monodelphis_domestica
ENSEBUG00000016040	-	99	66.892	ENSMALG00000020135	ipo7	87	67.841	Monopterus_albus
ENSEBUG00000016040	-	99	67.869	ENSMUSG00000066232	Ipo7	89	67.682	Mus_musculus
ENSEBUG00000016040	-	99	67.756	ENSMPUG00000012785	IPO7	89	67.573	Mustela_putorius_furo
ENSEBUG00000016040	-	99	67.303	ENSMLUG00000027687	IPO7	85	68.636	Myotis_lucifugus
ENSEBUG00000016040	-	99	65.727	ENSNGAG00000006507	Ipo7	88	65.615	Nannospalax_galili
ENSEBUG00000016040	-	99	67.756	ENSNLEG00000017560	IPO7	89	67.573	Nomascus_leucogenys
ENSEBUG00000016040	-	95	68.514	ENSMEUG00000001986	IPO7	86	68.514	Notamacropus_eugenii
ENSEBUG00000016040	-	99	65.502	ENSOPRG00000005430	IPO7	88	65.502	Ochotona_princeps
ENSEBUG00000016040	-	99	64.938	ENSODEG00000008218	IPO7	82	69.424	Octodon_degus
ENSEBUG00000016040	-	99	66.892	ENSONIG00000006069	ipo7	85	67.727	Oreochromis_niloticus
ENSEBUG00000016040	-	95	59.417	ENSOCUG00000000045	-	86	59.505	Oryctolagus_cuniculus
ENSEBUG00000016040	-	99	67.717	ENSOCUG00000007093	-	89	67.356	Oryctolagus_cuniculus
ENSEBUG00000016040	-	99	67.117	ENSORLG00000007093	ipo7	85	67.955	Oryzias_latipes
ENSEBUG00000016040	-	99	67.005	ENSORLG00020011226	ipo7	85	67.841	Oryzias_latipes_hni
ENSEBUG00000016040	-	99	67.117	ENSORLG00015009331	ipo7	88	67.955	Oryzias_latipes_hsok
ENSEBUG00000016040	-	99	66.667	ENSOMEG00000001444	ipo7	82	67.761	Oryzias_melastigma
ENSEBUG00000016040	-	99	67.756	ENSOGAG00000011507	IPO7	89	67.573	Otolemur_garnettii
ENSEBUG00000016040	-	99	67.756	ENSOARG00000012687	IPO7	89	67.573	Ovis_aries
ENSEBUG00000016040	-	99	67.756	ENSPPAG00000039367	IPO7	89	67.573	Pan_paniscus
ENSEBUG00000016040	-	99	67.756	ENSPPRG00000013728	IPO7	89	67.573	Panthera_pardus
ENSEBUG00000016040	-	99	67.644	ENSPTIG00000011093	IPO7	89	67.465	Panthera_tigris_altaica
ENSEBUG00000016040	-	99	67.756	ENSPTRG00000028713	IPO7	89	67.573	Pan_troglodytes
ENSEBUG00000016040	-	99	67.756	ENSPANG00000017378	IPO7	89	67.573	Papio_anubis
ENSEBUG00000016040	-	99	65.991	ENSPKIG00000022252	ipo7	88	66.932	Paramormyrops_kingsleyae
ENSEBUG00000016040	-	99	67.756	ENSPSIG00000006313	IPO7	88	67.756	Pelodiscus_sinensis
ENSEBUG00000016040	-	99	68.095	ENSPEMG00000005751	Ipo7	89	67.900	Peromyscus_maniculatus_bairdii
ENSEBUG00000016040	-	99	67.869	ENSPCIG00000005946	IPO7	89	67.682	Phascolarctos_cinereus
ENSEBUG00000016040	-	99	66.329	ENSPFOG00000009302	ipo7	86	67.273	Poecilia_formosa
ENSEBUG00000016040	-	99	66.216	ENSPLAG00000014371	ipo7	85	67.159	Poecilia_latipinna
ENSEBUG00000016040	-	99	66.329	ENSPMEG00000002604	ipo7	85	67.273	Poecilia_mexicana
ENSEBUG00000016040	-	99	66.554	ENSPREG00000023089	ipo7	85	67.500	Poecilia_reticulata
ENSEBUG00000016040	-	78	72.269	ENSPCAG00000007493	IPO7	70	72.269	Procavia_capensis
ENSEBUG00000016040	-	75	68.627	ENSPVAG00000013029	IPO7	68	68.627	Pteropus_vampyrus
ENSEBUG00000016040	-	99	66.667	ENSPNYG00000008534	ipo7	88	67.500	Pundamilia_nyererei
ENSEBUG00000016040	-	99	66.216	ENSPNAG00000028115	ipo7	85	67.045	Pygocentrus_nattereri
ENSEBUG00000016040	-	99	67.869	ENSRNOG00000010427	Ipo7	89	67.682	Rattus_norvegicus
ENSEBUG00000016040	-	99	67.756	ENSRBIG00000031871	IPO7	89	67.573	Rhinopithecus_bieti
ENSEBUG00000016040	-	99	67.756	ENSRROG00000031816	IPO7	89	67.573	Rhinopithecus_roxellana
ENSEBUG00000016040	-	99	65.017	ENSSBOG00000029640	IPO7	88	64.679	Saimiri_boliviensis_boliviensis
ENSEBUG00000016040	-	99	66.667	ENSSFOG00015013937	ipo7	85	67.500	Scleropages_formosus
ENSEBUG00000016040	-	99	66.929	ENSSMAG00000021418	ipo7	85	67.727	Scophthalmus_maximus
ENSEBUG00000016040	-	99	66.779	ENSSDUG00000000611	ipo7	85	67.841	Seriola_dumerili
ENSEBUG00000016040	-	99	66.779	ENSSLDG00000021417	ipo7	85	67.841	Seriola_lalandi_dorsalis
ENSEBUG00000016040	-	90	65.612	ENSSARG00000005190	IPO7	83	60.905	Sorex_araneus
ENSEBUG00000016040	-	99	62.677	ENSSPUG00000014319	IPO7	88	62.133	Sphenodon_punctatus
ENSEBUG00000016040	-	99	67.005	ENSSPAG00000020296	ipo7	85	67.841	Stegastes_partitus
ENSEBUG00000016040	-	99	67.531	ENSSSCG00000028886	IPO7	91	67.356	Sus_scrofa
ENSEBUG00000016040	-	99	67.942	ENSTGUG00000008189	IPO7	88	67.942	Taeniopygia_guttata
ENSEBUG00000016040	-	99	65.124	ENSTRUG00000017414	ipo7	85	66.136	Takifugu_rubripes
ENSEBUG00000016040	-	99	65.730	ENSTNIG00000009369	ipo7	86	67.157	Tetraodon_nigroviridis
ENSEBUG00000016040	-	99	66.159	ENSTTRG00000015352	IPO7	89	66.159	Tursiops_truncatus
ENSEBUG00000016040	-	99	67.905	ENSUAMG00000001673	IPO7	92	67.573	Ursus_americanus
ENSEBUG00000016040	-	99	67.756	ENSUMAG00000012870	IPO7	89	67.573	Ursus_maritimus
ENSEBUG00000016040	-	99	66.516	ENSVPAG00000003917	IPO7	89	66.376	Vicugna_pacos
ENSEBUG00000016040	-	99	67.418	ENSVVUG00000025822	IPO7	92	64.744	Vulpes_vulpes
ENSEBUG00000016040	-	99	63.923	ENSVVUG00000013293	-	88	63.385	Vulpes_vulpes
ENSEBUG00000016040	-	99	67.005	ENSXETG00000024201	ipo7	89	66.739	Xenopus_tropicalis
ENSEBUG00000016040	-	99	63.288	ENSXCOG00000011269	ipo7	88	64.205	Xiphophorus_couchianus
ENSEBUG00000016040	-	99	66.329	ENSXMAG00000009410	ipo7	85	67.273	Xiphophorus_maculatus