EuRBPDB

Description

Ensembl ID: ENSEBUG00000016062 (Gene tree)
Gene ID: -
Gene Symbol: dkc1 (1 of many)
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 44370 bases
Position: chrFYBX02009991.1:712348-756717
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026086	PUA	PF01472.20	4.3e-20	1	1
ENSEBUP00000026057	PUA	PF01472.20	5.3e-20	1	1
ENSEBUP00000026072	PUA	PF01472.20	5.3e-20	1	1
ENSEBUP00000026095	PUA	PF01472.20	5.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026633	-	2042	-	ENSEBUP00000026057	281 (aa)	-	-
ENSEBUT00000026662	-	1862	-	ENSEBUP00000026086	251 (aa)	-	-
ENSEBUT00000026671	-	1748	-	ENSEBUP00000026095	281 (aa)	-	-
ENSEBUT00000026648	-	1952	-	ENSEBUP00000026072	281 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016062	dkc1	93	65.236	ENSG00000130826	DKC1	86	79.096	Homo_sapiens
ENSEBUG00000016062	dkc1	71	77.401	ENSCSAVG00000010047	-	69	71.362	Ciona_savignyi
ENSEBUG00000016062	dkc1	98	60.985	ENSGALG00000005054	DKC1	51	60.985	Gallus_gallus
ENSEBUG00000016062	dkc1	98	63.454	ENSGACG00000004373	dkc1	92	64.000	Gasterosteus_aculeatus
ENSEBUG00000016062	dkc1	98	61.265	ENSHBUG00000012436	dkc1	51	61.265	Haplochromis_burtoni
ENSEBUG00000016062	dkc1	82	69.524	ENSHCOG00000021099	dkc1	50	63.780	Hippocampus_comes
ENSEBUG00000016062	dkc1	98	61.265	ENSMZEG00005014503	dkc1	51	61.265	Maylandia_zebra
ENSEBUG00000016062	dkc1	76	73.196	ENSODEG00000011816	-	50	63.281	Octodon_degus
ENSEBUG00000016062	dkc1	98	54.577	ENSPNAG00000005780	dkc1	52	53.608	Pygocentrus_nattereri
ENSEBUG00000016062	dkc1	98	58.635	ENSSDUG00000009963	dkc1	51	59.449	Seriola_dumerili
ENSEBUG00000016062	dkc1	93	65.236	ENSTBEG00000011262	DKC1	61	68.919	Tupaia_belangeri