EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016090 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 64967 bases
Position: chrFYBX02010634.1:3623678-3688644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026121	zf-C2H2	PF00096.26	2.7e-31	1	5
ENSEBUP00000026121	zf-C2H2	PF00096.26	2.7e-31	2	5
ENSEBUP00000026121	zf-C2H2	PF00096.26	2.7e-31	3	5
ENSEBUP00000026121	zf-C2H2	PF00096.26	2.7e-31	4	5
ENSEBUP00000026121	zf-C2H2	PF00096.26	2.7e-31	5	5
ENSEBUP00000026116	zf-C2H2	PF00096.26	7.4e-09	1	2
ENSEBUP00000026116	zf-C2H2	PF00096.26	7.4e-09	2	2
ENSEBUP00000026121	zf-met	PF12874.7	5.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026692	-	2400	-	ENSEBUP00000026116	362 (aa)	-	-
ENSEBUT00000026697	-	3549	-	ENSEBUP00000026121	547 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016090	-	89	44.872	ENSEBUG00000004026	-	99	55.729
ENSEBUG00000016090	-	51	46.369	ENSEBUG00000005703	-	97	43.779
ENSEBUG00000016090	-	91	44.643	ENSEBUG00000008039	-	92	48.744
ENSEBUG00000016090	-	92	43.590	ENSEBUG00000008229	-	85	51.220
ENSEBUG00000016090	-	93	51.266	ENSEBUG00000012543	-	84	51.266
ENSEBUG00000016090	-	92	41.250	ENSEBUG00000000967	-	93	40.506
ENSEBUG00000016090	-	93	48.438	ENSEBUG00000013622	-	82	51.042
ENSEBUG00000016090	-	91	42.857	ENSEBUG00000009330	-	81	52.604
ENSEBUG00000016090	-	58	38.462	ENSEBUG00000008852	ZNF845	87	44.271
ENSEBUG00000016090	-	74	42.105	ENSEBUG00000000422	-	64	50.521
ENSEBUG00000016090	-	61	45.226	ENSEBUG00000017017	-	80	46.734
ENSEBUG00000016090	-	53	46.392	ENSEBUG00000002032	-	90	46.392
ENSEBUG00000016090	-	61	43.069	ENSEBUG00000010472	-	95	43.069
ENSEBUG00000016090	-	53	46.875	ENSEBUG00000014739	-	94	46.875
ENSEBUG00000016090	-	94	47.396	ENSEBUG00000011764	-	76	47.396
ENSEBUG00000016090	-	94	40.288	ENSEBUG00000005913	-	99	42.604
ENSEBUG00000016090	-	98	42.644	ENSEBUG00000016292	-	98	42.272
ENSEBUG00000016090	-	96	42.308	ENSEBUG00000007386	-	97	53.646
ENSEBUG00000016090	-	91	44.872	ENSEBUG00000010357	-	86	54.118
ENSEBUG00000016090	-	53	45.833	ENSEBUG00000003455	-	93	45.833
ENSEBUG00000016090	-	53	44.792	ENSEBUG00000012748	-	89	44.792
ENSEBUG00000016090	-	51	46.512	ENSEBUG00000012628	ZNF845	99	43.750
ENSEBUG00000016090	-	53	48.438	ENSEBUG00000008185	-	84	48.438
ENSEBUG00000016090	-	56	46.354	ENSEBUG00000009291	-	95	46.354
ENSEBUG00000016090	-	51	47.917	ENSEBUG00000010794	-	93	47.917
ENSEBUG00000016090	-	88	35.897	ENSEBUG00000003128	-	89	43.750
ENSEBUG00000016090	-	51	42.308	ENSEBUG00000004011	-	90	53.933
ENSEBUG00000016090	-	94	42.678	ENSEBUG00000005200	-	95	41.026
ENSEBUG00000016090	-	93	51.042	ENSEBUG00000004992	-	84	51.042
ENSEBUG00000016090	-	53	41.327	ENSEBUG00000014717	-	80	41.327
ENSEBUG00000016090	-	51	41.558	ENSEBUG00000014050	-	79	49.206
ENSEBUG00000016090	-	90	43.590	ENSEBUG00000007054	-	78	55.346
ENSEBUG00000016090	-	88	36.842	ENSEBUG00000009317	-	76	42.932
ENSEBUG00000016090	-	88	33.333	ENSEBUG00000002586	-	54	41.063
ENSEBUG00000016090	-	93	52.083	ENSEBUG00000008272	-	85	52.083
ENSEBUG00000016090	-	89	37.500	ENSEBUG00000016496	-	71	41.538
ENSEBUG00000016090	-	61	47.396	ENSEBUG00000014648	-	85	47.396
ENSEBUG00000016090	-	68	42.723	ENSEBUG00000015472	-	96	44.118
ENSEBUG00000016090	-	51	38.961	ENSEBUG00000008306	-	79	47.368
ENSEBUG00000016090	-	90	42.857	ENSEBUG00000015110	-	82	50.521
ENSEBUG00000016090	-	51	45.833	ENSEBUG00000011479	-	92	45.833
ENSEBUG00000016090	-	89	39.744	ENSEBUG00000007143	-	79	50.000
ENSEBUG00000016090	-	89	42.308	ENSEBUG00000013874	-	85	52.907
ENSEBUG00000016090	-	52	41.071	ENSEBUG00000015837	-	98	41.071
ENSEBUG00000016090	-	90	42.308	ENSEBUG00000002291	-	90	48.958
ENSEBUG00000016090	-	56	46.734	ENSEBUG00000011244	-	98	46.734
ENSEBUG00000016090	-	51	41.026	ENSEBUG00000005310	ZNF226	84	51.042
ENSEBUG00000016090	-	66	42.347	ENSEBUG00000005186	-	74	42.347
ENSEBUG00000016090	-	76	43.590	ENSEBUG00000010031	-	64	55.474
ENSEBUG00000016090	-	90	44.737	ENSEBUG00000014227	-	74	51.515
ENSEBUG00000016090	-	55	45.641	ENSEBUG00000009909	-	96	45.641
ENSEBUG00000016090	-	93	48.521	ENSEBUG00000015207	-	99	48.521
ENSEBUG00000016090	-	58	46.707	ENSEBUG00000003555	-	85	46.707
ENSEBUG00000016090	-	94	49.112	ENSEBUG00000010878	-	94	50.000
ENSEBUG00000016090	-	89	41.026	ENSEBUG00000011751	-	73	51.042
ENSEBUG00000016090	-	91	41.026	ENSEBUG00000011837	-	98	51.235
ENSEBUG00000016090	-	53	43.195	ENSEBUG00000007308	ZNF845	95	42.995
ENSEBUG00000016090	-	93	41.026	ENSEBUG00000004841	-	99	47.917
ENSEBUG00000016090	-	60	32.955	ENSEBUG00000013577	-	86	39.623
ENSEBUG00000016090	-	90	40.260	ENSEBUG00000013126	-	93	41.224
ENSEBUG00000016090	-	94	51.562	ENSEBUG00000008392	-	93	51.562
ENSEBUG00000016090	-	76	38.129	ENSEBUG00000009383	-	97	39.645
ENSEBUG00000016090	-	61	41.667	ENSEBUG00000011896	-	72	47.668
ENSEBUG00000016090	-	93	52.083	ENSEBUG00000002146	-	95	52.083
ENSEBUG00000016090	-	94	45.714	ENSEBUG00000002721	-	99	50.000
ENSEBUG00000016090	-	89	42.029	ENSEBUG00000014469	-	77	49.405
ENSEBUG00000016090	-	88	37.179	ENSEBUG00000016362	-	71	47.917
ENSEBUG00000016090	-	58	43.590	ENSEBUG00000016093	-	89	48.438
ENSEBUG00000016090	-	98	43.038	ENSEBUG00000015993	-	83	46.632
ENSEBUG00000016090	-	89	40.260	ENSEBUG00000004844	-	93	49.479
ENSEBUG00000016090	-	89	42.857	ENSEBUG00000006112	-	97	51.562
ENSEBUG00000016090	-	89	38.158	ENSEBUG00000009484	-	55	47.179
ENSEBUG00000016090	-	90	41.026	ENSEBUG00000003232	-	91	53.646
ENSEBUG00000016090	-	93	47.917	ENSEBUG00000006092	-	82	47.917
ENSEBUG00000016090	-	97	43.590	ENSEBUG00000015522	-	84	54.167
ENSEBUG00000016090	-	94	48.214	ENSEBUG00000001741	-	79	48.958
ENSEBUG00000016090	-	78	43.590	ENSEBUG00000007563	-	70	52.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016090	-	59	31.373	ENSACLG00000015462	-	68	42.336	Astatotilapia_calliptera
ENSEBUG00000016090	-	52	50.820	ENSGAFG00000001481	-	87	50.820	Gambusia_affinis
ENSEBUG00000016090	-	60	33.766	ENSHBUG00000019377	-	60	42.336	Haplochromis_burtoni
ENSEBUG00000016090	-	60	31.373	ENSMZEG00005018502	-	68	42.336	Maylandia_zebra
ENSEBUG00000016090	-	57	47.706	ENSSMAG00000013663	-	94	47.706	Scophthalmus_maximus
ENSEBUG00000016090	-	53	51.667	ENSSLDG00000025676	-	82	51.667	Seriola_lalandi_dorsalis