EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016097 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-172f14.1|zgc:64188
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 245316 bases
Position: chrFYBX02009592.1:162194-407509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026134	Arb2	PF09757.9	1.7e-08	1	1
ENSEBUP00000026154	Arb2	PF09757.9	2e-08	1	1
ENSEBUP00000026125	Arb2	PF09757.9	2e-08	1	1
ENSEBUP00000026169	Arb2	PF09757.9	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026701	-	6139	-	ENSEBUP00000026125	508 (aa)	-	-
ENSEBUT00000026745	-	6510	-	ENSEBUP00000026169	508 (aa)	-	-
ENSEBUT00000026710	-	6626	-	ENSEBUP00000026134	469 (aa)	-	-
ENSEBUT00000026730	-	6563	-	ENSEBUP00000026154	501 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016097	-	62	40.000	ENSG00000113391	FAM172A	89	40.000	Homo_sapiens
ENSEBUG00000016097	-	70	39.946	ENSAPLG00000004055	FAM172A	85	39.946	Anas_platyrhynchos
ENSEBUG00000016097	-	58	39.871	ENSACAG00000013305	FAM172A	81	39.871	Anolis_carolinensis
ENSEBUG00000016097	-	56	39.934	ENSANAG00000035869	FAM172A	91	37.249	Aotus_nancymaae
ENSEBUG00000016097	-	62	40.303	ENSBTAG00000050195	FAM172A	79	40.303	Bos_taurus
ENSEBUG00000016097	-	62	40.000	ENSCJAG00000010444	FAM172A	79	40.000	Callithrix_jacchus
ENSEBUG00000016097	-	58	39.550	ENSCAFG00000008064	FAM172A	84	39.550	Canis_familiaris
ENSEBUG00000016097	-	70	38.043	ENSCAFG00020006210	FAM172A	94	39.924	Canis_lupus_dingo
ENSEBUG00000016097	-	62	40.303	ENSCHIG00000008440	FAM172A	79	40.303	Capra_hircus
ENSEBUG00000016097	-	62	40.000	ENSCCAG00000023116	FAM172A	92	40.000	Cebus_capucinus
ENSEBUG00000016097	-	58	39.032	ENSCLAG00000005472	FAM172A	80	39.032	Chinchilla_lanigera
ENSEBUG00000016097	-	63	33.766	ENSCPBG00000004402	-	87	33.766	Chrysemys_picta_bellii
ENSEBUG00000016097	-	62	40.000	ENSDNOG00000004689	FAM172A	79	40.303	Dasypus_novemcinctus
ENSEBUG00000016097	-	50	40.074	ENSDORG00000013558	Fam172a	89	40.074	Dipodomys_ordii
ENSEBUG00000016097	-	62	39.697	ENSECAG00000018274	FAM172A	83	38.710	Equus_caballus
ENSEBUG00000016097	-	57	40.717	ENSEEUG00000002887	FAM172A	74	40.717	Erinaceus_europaeus
ENSEBUG00000016097	-	64	39.718	ENSELUG00000017647	fam172a	84	39.718	Esox_lucius
ENSEBUG00000016097	-	62	40.000	ENSFCAG00000025443	FAM172A	79	40.303	Felis_catus
ENSEBUG00000016097	-	58	40.385	ENSFALG00000009072	FAM172A	84	40.385	Ficedula_albicollis
ENSEBUG00000016097	-	67	32.923	ENSFALG00000006501	-	99	32.923	Ficedula_albicollis
ENSEBUG00000016097	-	70	39.130	ENSGALG00000014661	FAM172A	85	39.130	Gallus_gallus
ENSEBUG00000016097	-	70	39.130	ENSGAGG00000003839	FAM172A	85	39.130	Gopherus_agassizii
ENSEBUG00000016097	-	63	33.766	ENSGAGG00000022828	-	88	33.766	Gopherus_agassizii
ENSEBUG00000016097	-	62	40.000	ENSGGOG00000010296	FAM172A	92	40.000	Gorilla_gorilla
ENSEBUG00000016097	-	62	40.303	ENSHGLG00000011178	FAM172A	87	39.706	Heterocephalus_glaber_female
ENSEBUG00000016097	-	58	39.355	ENSHGLG00100013340	FAM172A	95	39.706	Heterocephalus_glaber_male
ENSEBUG00000016097	-	62	40.303	ENSSTOG00000009918	FAM172A	79	40.303	Ictidomys_tridecemlineatus
ENSEBUG00000016097	-	63	35.110	ENSLACG00000001532	si:ch73-41e3.7	89	35.110	Latimeria_chalumnae
ENSEBUG00000016097	-	62	39.697	ENSLOCG00000001629	fam172a	80	40.000	Lepisosteus_oculatus
ENSEBUG00000016097	-	62	40.000	ENSMNEG00000039938	FAM172A	92	40.000	Macaca_nemestrina
ENSEBUG00000016097	-	62	40.303	ENSMICG00000030403	FAM172A	90	39.785	Microcebus_murinus
ENSEBUG00000016097	-	62	40.303	ENSMOCG00000003613	Fam172a	89	40.303	Microtus_ochrogaster
ENSEBUG00000016097	-	62	41.515	ENSMODG00000020131	FAM172A	79	41.515	Monodelphis_domestica
ENSEBUG00000016097	-	62	30.061	MGP_PahariEiJ_G0015818	Fam172a	87	30.061	Mus_pahari
ENSEBUG00000016097	-	62	40.303	ENSNGAG00000019570	Fam172a	89	40.303	Nannospalax_galili
ENSEBUG00000016097	-	58	40.193	ENSOANG00000011068	FAM172A	83	40.193	Ornithorhynchus_anatinus
ENSEBUG00000016097	-	62	40.000	ENSOCUG00000007299	FAM172A	78	40.000	Oryctolagus_cuniculus
ENSEBUG00000016097	-	62	40.303	ENSOGAG00000015189	FAM172A	79	40.606	Otolemur_garnettii
ENSEBUG00000016097	-	58	39.355	ENSOARG00000016711	FAM172A	71	39.355	Ovis_aries
ENSEBUG00000016097	-	62	40.000	ENSPPRG00000006653	FAM172A	79	40.303	Panthera_pardus
ENSEBUG00000016097	-	62	40.000	ENSPTIG00000012681	FAM172A	79	40.303	Panthera_tigris_altaica
ENSEBUG00000016097	-	62	41.071	ENSPKIG00000012314	fam172a	85	41.071	Paramormyrops_kingsleyae
ENSEBUG00000016097	-	62	40.122	ENSPEMG00000009604	-	79	40.122	Peromyscus_maniculatus_bairdii
ENSEBUG00000016097	-	62	41.212	ENSPCIG00000028612	FAM172A	79	41.212	Phascolarctos_cinereus
ENSEBUG00000016097	-	62	40.000	ENSSBOG00000019860	FAM172A	79	40.000	Saimiri_boliviensis_boliviensis
ENSEBUG00000016097	-	62	41.515	ENSSHAG00000013743	FAM172A	79	41.515	Sarcophilus_harrisii
ENSEBUG00000016097	-	62	41.212	ENSSPUG00000008161	FAM172A	79	41.212	Sphenodon_punctatus
ENSEBUG00000016097	-	62	40.303	ENSSSCG00000027608	FAM172A	89	40.303	Sus_scrofa
ENSEBUG00000016097	-	70	39.130	ENSTGUG00000000715	FAM172A	93	39.130	Taeniopygia_guttata
ENSEBUG00000016097	-	57	33.657	ENSTGUG00000013623	-	92	33.657	Taeniopygia_guttata
ENSEBUG00000016097	-	53	31.741	ENSTNIG00000009902	fam172a	88	32.082	Tetraodon_nigroviridis
ENSEBUG00000016097	-	62	40.000	ENSTTRG00000001521	FAM172A	79	40.000	Tursiops_truncatus
ENSEBUG00000016097	-	62	40.303	ENSUMAG00000005442	FAM172A	83	39.172	Ursus_maritimus
ENSEBUG00000016097	-	70	38.043	ENSVVUG00000022112	FAM172A	85	38.043	Vulpes_vulpes
ENSEBUG00000016097	-	64	36.025	ENSXETG00000033027	-	88	36.025	Xenopus_tropicalis
ENSEBUG00000016097	-	70	37.398	ENSXETG00000011592	fam172a	84	37.398	Xenopus_tropicalis