EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016100 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: polymerase (RNA) II (DNA directed) polypeptide J
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 6814 bases
Position: chrFYBX02000109.1:606570-613383
Accession: ZDB-GENE-050522-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026130	RNA_pol_L_2	PF13656.6	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026706	-	264	-	ENSEBUP00000026130	87 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016100	polr2j	89	62.264	ENSG00000228049	POLR2J2	94	60.185	Homo_sapiens
ENSEBUG00000016100	polr2j	100	64.103	ENSG00000005075	POLR2J	100	64.103	Homo_sapiens
ENSEBUG00000016100	polr2j	100	64.957	ENSAPOG00000019538	polr2j	100	64.957	Acanthochromis_polyacanthus
ENSEBUG00000016100	polr2j	100	59.055	ENSAMEG00000015480	-	100	59.055	Ailuropoda_melanoleuca
ENSEBUG00000016100	polr2j	91	46.364	ENSACIG00000014549	POLR2J2	91	46.364	Amphilophus_citrinellus
ENSEBUG00000016100	polr2j	100	64.957	ENSAOCG00000006937	polr2j	100	64.957	Amphiprion_ocellaris
ENSEBUG00000016100	polr2j	100	64.957	ENSAPEG00000021761	polr2j	100	64.957	Amphiprion_percula
ENSEBUG00000016100	polr2j	100	64.957	ENSATEG00000009731	polr2j	100	64.957	Anabas_testudineus
ENSEBUG00000016100	polr2j	100	64.957	ENSATEG00000013312	-	100	64.957	Anabas_testudineus
ENSEBUG00000016100	polr2j	82	83.099	ENSAPLG00000003744	-	70	83.099	Anas_platyrhynchos
ENSEBUG00000016100	polr2j	100	58.974	ENSACAG00000000251	POLR2J	100	58.974	Anolis_carolinensis
ENSEBUG00000016100	polr2j	100	64.957	ENSACLG00000014564	polr2j	100	64.957	Astatotilapia_calliptera
ENSEBUG00000016100	polr2j	100	64.957	ENSAMXG00000007517	polr2j	100	64.957	Astyanax_mexicanus
ENSEBUG00000016100	polr2j	93	45.455	WBGene00012187	rpb-11	90	45.455	Caenorhabditis_elegans
ENSEBUG00000016100	polr2j	100	86.207	ENSCJAG00000016203	-	100	86.207	Callithrix_jacchus
ENSEBUG00000016100	polr2j	100	64.103	ENSCAFG00000013683	-	100	64.103	Canis_familiaris
ENSEBUG00000016100	polr2j	82	83.099	ENSTSYG00000029243	-	61	83.099	Carlito_syrichta
ENSEBUG00000016100	polr2j	100	64.103	ENSCPOG00000001401	-	100	64.103	Cavia_porcellus
ENSEBUG00000016100	polr2j	100	86.207	ENSCATG00000016595	-	100	86.207	Cercocebus_atys
ENSEBUG00000016100	polr2j	100	64.103	ENSCLAG00000005238	-	100	64.103	Chinchilla_lanigera
ENSEBUG00000016100	polr2j	100	64.103	ENSCSAG00000018092	-	100	64.103	Chlorocebus_sabaeus
ENSEBUG00000016100	polr2j	100	57.265	ENSCING00000020531	-	100	57.265	Ciona_intestinalis
ENSEBUG00000016100	polr2j	100	57.265	ENSCSAVG00000006948	-	100	57.265	Ciona_savignyi
ENSEBUG00000016100	polr2j	100	87.356	ENSCGRG00001012814	Polr2j	100	87.356	Cricetulus_griseus_chok1gshd
ENSEBUG00000016100	polr2j	100	52.991	ENSCGRG00000008433	Polr2j	100	52.991	Cricetulus_griseus_crigri
ENSEBUG00000016100	polr2j	100	64.957	ENSCSEG00000020352	polr2j	100	64.957	Cynoglossus_semilaevis
ENSEBUG00000016100	polr2j	100	64.103	ENSCVAG00000014267	polr2j	100	64.103	Cyprinodon_variegatus
ENSEBUG00000016100	polr2j	100	65.812	ENSDARG00000035146	polr2j	100	65.812	Danio_rerio
ENSEBUG00000016100	polr2j	100	86.207	ENSDORG00000005934	Polr2j	100	86.207	Dipodomys_ordii
ENSEBUG00000016100	polr2j	98	59.130	FBgn0032634	Rpb11	98	59.130	Drosophila_melanogaster
ENSEBUG00000016100	polr2j	100	64.103	ENSEASG00005016864	-	100	64.103	Equus_asinus_asinus
ENSEBUG00000016100	polr2j	100	64.957	ENSELUG00000012822	polr2j	100	64.957	Esox_lucius
ENSEBUG00000016100	polr2j	100	64.103	ENSFCAG00000000377	-	100	64.103	Felis_catus
ENSEBUG00000016100	polr2j	100	64.103	ENSFALG00000009523	POLR2J	100	64.103	Ficedula_albicollis
ENSEBUG00000016100	polr2j	100	64.103	ENSFDAG00000010507	-	100	64.103	Fukomys_damarensis
ENSEBUG00000016100	polr2j	100	64.957	ENSFHEG00000006625	polr2j	100	64.957	Fundulus_heteroclitus
ENSEBUG00000016100	polr2j	100	64.103	ENSGMOG00000018207	polr2j	100	64.103	Gadus_morhua
ENSEBUG00000016100	polr2j	100	64.103	ENSGALG00000030808	-	100	64.103	Gallus_gallus
ENSEBUG00000016100	polr2j	100	64.957	ENSGAFG00000019555	polr2j	100	64.957	Gambusia_affinis
ENSEBUG00000016100	polr2j	100	64.957	ENSGACG00000003310	polr2j	100	64.957	Gasterosteus_aculeatus
ENSEBUG00000016100	polr2j	82	83.099	ENSGAGG00000018304	-	65	83.099	Gopherus_agassizii
ENSEBUG00000016100	polr2j	82	78.873	ENSGGOG00000004519	-	57	78.873	Gorilla_gorilla
ENSEBUG00000016100	polr2j	100	64.957	ENSHBUG00000008467	polr2j	100	64.957	Haplochromis_burtoni
ENSEBUG00000016100	polr2j	100	86.207	ENSHGLG00000013598	POLR2J	100	86.207	Heterocephalus_glaber_female
ENSEBUG00000016100	polr2j	100	86.207	ENSHGLG00100011242	POLR2J	100	86.207	Heterocephalus_glaber_male
ENSEBUG00000016100	polr2j	100	64.957	ENSHCOG00000014827	polr2j	68	64.957	Hippocampus_comes
ENSEBUG00000016100	polr2j	100	64.957	ENSIPUG00000023960	polr2j	100	64.957	Ictalurus_punctatus
ENSEBUG00000016100	polr2j	100	86.207	ENSSTOG00000006377	POLR2J	100	86.207	Ictidomys_tridecemlineatus
ENSEBUG00000016100	polr2j	100	59.829	ENSJJAG00000018834	-	100	59.829	Jaculus_jaculus
ENSEBUG00000016100	polr2j	100	86.207	ENSJJAG00000013854	-	100	86.207	Jaculus_jaculus
ENSEBUG00000016100	polr2j	100	64.957	ENSKMAG00000014581	polr2j	79	64.957	Kryptolebias_marmoratus
ENSEBUG00000016100	polr2j	100	64.957	ENSLBEG00000005885	polr2j	100	64.957	Labrus_bergylta
ENSEBUG00000016100	polr2j	100	64.957	ENSLOCG00000001885	polr2j	89	64.957	Lepisosteus_oculatus
ENSEBUG00000016100	polr2j	100	64.103	ENSLAFG00000021507	-	100	64.103	Loxodonta_africana
ENSEBUG00000016100	polr2j	100	86.207	ENSMMUG00000012019	POLR2J	100	86.207	Macaca_mulatta
ENSEBUG00000016100	polr2j	100	64.957	ENSMAMG00000009374	polr2j	100	64.957	Mastacembelus_armatus
ENSEBUG00000016100	polr2j	100	64.957	ENSMZEG00005011932	polr2j	100	64.957	Maylandia_zebra
ENSEBUG00000016100	polr2j	100	64.103	ENSMGAG00000003534	POLR2J	100	64.103	Meleagris_gallopavo
ENSEBUG00000016100	polr2j	100	87.356	ENSMAUG00000013049	Polr2j	100	87.356	Mesocricetus_auratus
ENSEBUG00000016100	polr2j	67	81.034	ENSMICG00000026811	-	59	81.034	Microcebus_murinus
ENSEBUG00000016100	polr2j	100	86.207	ENSMOCG00000001294	Polr2j	100	86.207	Microtus_ochrogaster
ENSEBUG00000016100	polr2j	100	65.812	ENSMMOG00000013265	polr2j	100	65.812	Mola_mola
ENSEBUG00000016100	polr2j	100	58.594	ENSMODG00000013617	-	100	58.594	Monodelphis_domestica
ENSEBUG00000016100	polr2j	100	64.957	ENSMALG00000020749	polr2j	100	64.957	Monopterus_albus
ENSEBUG00000016100	polr2j	100	87.356	MGP_CAROLIEiJ_G0027851	Polr2j	100	87.356	Mus_caroli
ENSEBUG00000016100	polr2j	100	86.207	ENSMUSG00000039771	Polr2j	100	86.207	Mus_musculus
ENSEBUG00000016100	polr2j	100	87.356	MGP_PahariEiJ_G0024434	Polr2j	100	87.356	Mus_pahari
ENSEBUG00000016100	polr2j	100	86.207	MGP_SPRETEiJ_G0028853	Polr2j	100	86.207	Mus_spretus
ENSEBUG00000016100	polr2j	100	64.103	ENSMLUG00000010467	POLR2J	100	64.103	Myotis_lucifugus
ENSEBUG00000016100	polr2j	100	87.356	ENSNGAG00000023412	Polr2j	100	87.356	Nannospalax_galili
ENSEBUG00000016100	polr2j	54	56.000	ENSNBRG00000006580	polr2j	59	56.000	Neolamprologus_brichardi
ENSEBUG00000016100	polr2j	100	64.103	ENSODEG00000015648	-	100	64.103	Octodon_degus
ENSEBUG00000016100	polr2j	100	58.333	ENSODEG00000008559	-	100	58.333	Octodon_degus
ENSEBUG00000016100	polr2j	100	64.957	ENSONIG00000000259	polr2j	100	64.957	Oreochromis_niloticus
ENSEBUG00000016100	polr2j	100	61.538	ENSOANG00000020912	POLR2J	100	61.538	Ornithorhynchus_anatinus
ENSEBUG00000016100	polr2j	100	59.055	ENSOCUG00000023609	POLR2J	100	59.055	Oryctolagus_cuniculus
ENSEBUG00000016100	polr2j	100	64.957	ENSORLG00000029046	polr2j	83	64.957	Oryzias_latipes
ENSEBUG00000016100	polr2j	100	64.957	ENSORLG00020007625	polr2j	83	64.957	Oryzias_latipes_hni
ENSEBUG00000016100	polr2j	100	64.957	ENSORLG00015003457	polr2j	83	64.957	Oryzias_latipes_hsok
ENSEBUG00000016100	polr2j	100	65.812	ENSOMEG00000002097	polr2j	100	65.812	Oryzias_melastigma
ENSEBUG00000016100	polr2j	100	58.594	ENSOGAG00000008250	-	100	58.594	Otolemur_garnettii
ENSEBUG00000016100	polr2j	100	64.103	ENSOARG00000014204	-	98	64.103	Ovis_aries
ENSEBUG00000016100	polr2j	100	64.103	ENSPPRG00000012439	-	100	64.103	Panthera_pardus
ENSEBUG00000016100	polr2j	82	83.099	ENSPTIG00000018714	-	69	83.099	Panthera_tigris_altaica
ENSEBUG00000016100	polr2j	82	83.099	ENSPSIG00000010173	-	71	83.099	Pelodiscus_sinensis
ENSEBUG00000016100	polr2j	100	64.957	ENSPMGG00000021256	polr2j	100	64.957	Periophthalmus_magnuspinnatus
ENSEBUG00000016100	polr2j	100	87.356	ENSPEMG00000015733	Polr2j	100	87.356	Peromyscus_maniculatus_bairdii
ENSEBUG00000016100	polr2j	100	64.103	ENSPCIG00000009026	-	100	64.103	Phascolarctos_cinereus
ENSEBUG00000016100	polr2j	100	64.957	ENSPFOG00000012001	polr2j	99	64.957	Poecilia_formosa
ENSEBUG00000016100	polr2j	100	64.957	ENSPLAG00000014075	polr2j	100	64.957	Poecilia_latipinna
ENSEBUG00000016100	polr2j	100	64.957	ENSPMEG00000020585	polr2j	100	64.957	Poecilia_mexicana
ENSEBUG00000016100	polr2j	100	64.957	ENSPREG00000015255	polr2j	100	64.957	Poecilia_reticulata
ENSEBUG00000016100	polr2j	100	86.207	ENSPCOG00000024573	-	100	86.207	Propithecus_coquereli
ENSEBUG00000016100	polr2j	99	58.621	ENSPVAG00000017770	-	66	58.621	Pteropus_vampyrus
ENSEBUG00000016100	polr2j	100	64.957	ENSPNYG00000014832	polr2j	100	64.957	Pundamilia_nyererei
ENSEBUG00000016100	polr2j	100	65.812	ENSPNAG00000016595	polr2j	100	65.812	Pygocentrus_nattereri
ENSEBUG00000016100	polr2j	100	64.103	ENSRNOG00000001430	Polr2j	100	64.103	Rattus_norvegicus
ENSEBUG00000016100	polr2j	100	86.207	ENSSBOG00000025579	-	100	86.207	Saimiri_boliviensis_boliviensis
ENSEBUG00000016100	polr2j	80	82.857	ENSSHAG00000010443	-	82	82.857	Sarcophilus_harrisii
ENSEBUG00000016100	polr2j	91	61.468	ENSSFOG00015003371	polr2j	83	61.468	Scleropages_formosus
ENSEBUG00000016100	polr2j	100	64.957	ENSSMAG00000006729	polr2j	100	64.957	Scophthalmus_maximus
ENSEBUG00000016100	polr2j	100	64.957	ENSSDUG00000018490	polr2j	100	64.957	Seriola_dumerili
ENSEBUG00000016100	polr2j	100	64.957	ENSSLDG00000022354	polr2j	100	64.957	Seriola_lalandi_dorsalis
ENSEBUG00000016100	polr2j	82	83.099	ENSSPUG00000010802	-	100	64.103	Sphenodon_punctatus
ENSEBUG00000016100	polr2j	100	64.957	ENSSPAG00000021953	polr2j	100	64.957	Stegastes_partitus
ENSEBUG00000016100	polr2j	100	64.103	ENSSSCG00000007688	-	100	64.103	Sus_scrofa
ENSEBUG00000016100	polr2j	100	54.310	ENSSSCG00000003703	-	83	54.310	Sus_scrofa
ENSEBUG00000016100	polr2j	82	83.099	ENSTGUG00000004501	-	71	83.099	Taeniopygia_guttata
ENSEBUG00000016100	polr2j	79	84.058	ENSTGUG00000004510	-	100	84.058	Taeniopygia_guttata
ENSEBUG00000016100	polr2j	100	64.957	ENSTRUG00000020842	polr2j	100	64.957	Takifugu_rubripes
ENSEBUG00000016100	polr2j	100	64.103	ENSTNIG00000002994	polr2j	100	64.103	Tetraodon_nigroviridis
ENSEBUG00000016100	polr2j	89	61.682	ENSTBEG00000005797	-	70	61.682	Tupaia_belangeri
ENSEBUG00000016100	polr2j	100	64.103	ENSUAMG00000011310	-	100	64.103	Ursus_americanus
ENSEBUG00000016100	polr2j	100	64.103	ENSUMAG00000012594	-	100	64.103	Ursus_maritimus
ENSEBUG00000016100	polr2j	100	64.103	ENSXETG00000001108	polr2j	100	64.103	Xenopus_tropicalis
ENSEBUG00000016100	polr2j	100	64.957	ENSXMAG00000012422	polr2j	100	64.957	Xiphophorus_maculatus