EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016143 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 94951 bases
Position: chrFYBX02009742.1:128333-223283
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026225	KH_1	PF00013.29	7.6e-62	1	4
ENSEBUP00000026225	KH_1	PF00013.29	7.6e-62	2	4
ENSEBUP00000026225	KH_1	PF00013.29	7.6e-62	3	4
ENSEBUP00000026225	KH_1	PF00013.29	7.6e-62	4	4
ENSEBUP00000026225	DUF1897	PF09005.10	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026801	-	1869	-	ENSEBUP00000026225	622 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016143	fubp1	58	30.457	ENSEBUG00000009697	zgc:110045	72	32.847
ENSEBUG00000016143	fubp1	51	31.507	ENSEBUG00000007485	-	81	31.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016143	fubp1	64	65.152	ENSG00000162613	FUBP1	86	46.101	Homo_sapiens
ENSEBUG00000016143	fubp1	63	63.793	ENSAPOG00000014845	fubp1	62	66.667	Acanthochromis_polyacanthus
ENSEBUG00000016143	fubp1	64	65.152	ENSAMEG00000007372	FUBP1	80	47.740	Ailuropoda_melanoleuca
ENSEBUG00000016143	fubp1	56	49.626	ENSACIG00000020024	fubp1	64	75.926	Amphilophus_citrinellus
ENSEBUG00000016143	fubp1	55	56.749	ENSAPEG00000012232	fubp1	59	57.300	Amphiprion_percula
ENSEBUG00000016143	fubp1	63	69.492	ENSATEG00000018619	fubp1	65	68.852	Anabas_testudineus
ENSEBUG00000016143	fubp1	64	58.462	ENSAPLG00000005965	FUBP1	89	46.372	Anas_platyrhynchos
ENSEBUG00000016143	fubp1	64	64.179	ENSACLG00000006708	fubp1	82	49.060	Astatotilapia_calliptera
ENSEBUG00000016143	fubp1	77	48.276	ENSAMXG00000005525	fubp1	97	51.533	Astyanax_mexicanus
ENSEBUG00000016143	fubp1	64	65.152	ENSCJAG00000007062	FUBP1	83	47.826	Callithrix_jacchus
ENSEBUG00000016143	fubp1	64	65.152	ENSCAFG00000020361	FUBP1	86	46.274	Canis_familiaris
ENSEBUG00000016143	fubp1	64	60.656	ENSTSYG00000000148	FUBP1	91	45.927	Carlito_syrichta
ENSEBUG00000016143	fubp1	55	64.567	ENSCAPG00000011052	-	62	64.567	Cavia_aperea
ENSEBUG00000016143	fubp1	64	58.462	ENSCPOG00000002757	FUBP1	84	45.051	Cavia_porcellus
ENSEBUG00000016143	fubp1	64	67.742	ENSCCAG00000036537	FUBP1	83	50.909	Cebus_capucinus
ENSEBUG00000016143	fubp1	64	65.152	ENSCATG00000042126	FUBP1	86	46.101	Cercocebus_atys
ENSEBUG00000016143	fubp1	65	65.152	ENSCLAG00000005621	FUBP1	95	46.771	Chinchilla_lanigera
ENSEBUG00000016143	fubp1	64	65.152	ENSCSAG00000001402	FUBP1	86	46.101	Chlorocebus_sabaeus
ENSEBUG00000016143	fubp1	64	58.462	ENSCHOG00000008177	FUBP1	81	46.691	Choloepus_hoffmanni
ENSEBUG00000016143	fubp1	64	65.152	ENSCGRG00001007103	Fubp1	88	46.101	Cricetulus_griseus_chok1gshd
ENSEBUG00000016143	fubp1	64	65.152	ENSCGRG00000003372	Fubp1	91	45.862	Cricetulus_griseus_crigri
ENSEBUG00000016143	fubp1	68	66.071	ENSCSEG00000021412	fubp1	65	72.222	Cynoglossus_semilaevis
ENSEBUG00000016143	fubp1	64	67.797	ENSCVAG00000014487	fubp1	72	66.176	Cyprinodon_variegatus
ENSEBUG00000016143	fubp1	63	70.968	ENSDARG00000029248	fubp1	85	50.735	Danio_rerio
ENSEBUG00000016143	fubp1	62	58.333	ENSDNOG00000034565	-	73	60.714	Dasypus_novemcinctus
ENSEBUG00000016143	fubp1	64	65.152	ENSDORG00000016534	Fubp1	81	46.237	Dipodomys_ordii
ENSEBUG00000016143	fubp1	59	70.270	ENSEEUG00000001287	FUBP1	53	77.143	Erinaceus_europaeus
ENSEBUG00000016143	fubp1	62	71.930	ENSELUG00000007990	fubp1	63	71.667	Esox_lucius
ENSEBUG00000016143	fubp1	64	58.462	ENSFALG00000005768	FUBP1	81	46.372	Ficedula_albicollis
ENSEBUG00000016143	fubp1	64	58.462	ENSFDAG00000014210	FUBP1	81	47.920	Fukomys_damarensis
ENSEBUG00000016143	fubp1	63	65.574	ENSFHEG00000005230	fubp1	75	72.727	Fundulus_heteroclitus
ENSEBUG00000016143	fubp1	61	61.194	ENSGMOG00000003370	fubp1	66	67.213	Gadus_morhua
ENSEBUG00000016143	fubp1	64	58.462	ENSGALG00000008939	FUBP1	87	46.290	Gallus_gallus
ENSEBUG00000016143	fubp1	63	66.667	ENSGAFG00000020972	fubp1	68	64.706	Gambusia_affinis
ENSEBUG00000016143	fubp1	58	53.947	ENSGACG00000016563	fubp1	67	69.091	Gasterosteus_aculeatus
ENSEBUG00000016143	fubp1	64	62.687	ENSHBUG00000009835	fubp1	64	68.254	Haplochromis_burtoni
ENSEBUG00000016143	fubp1	64	58.462	ENSHGLG00000008415	-	86	45.862	Heterocephalus_glaber_female
ENSEBUG00000016143	fubp1	79	46.909	ENSHGLG00000002808	-	82	51.056	Heterocephalus_glaber_female
ENSEBUG00000016143	fubp1	79	46.558	ENSHGLG00100001414	-	82	50.669	Heterocephalus_glaber_male
ENSEBUG00000016143	fubp1	64	58.462	ENSHGLG00100003417	-	86	45.862	Heterocephalus_glaber_male
ENSEBUG00000016143	fubp1	64	58.571	ENSHCOG00000000910	fubp1	88	45.533	Hippocampus_comes
ENSEBUG00000016143	fubp1	64	65.714	ENSIPUG00000009896	fubp1	66	70.588	Ictalurus_punctatus
ENSEBUG00000016143	fubp1	64	65.152	ENSSTOG00000014312	FUBP1	86	46.274	Ictidomys_tridecemlineatus
ENSEBUG00000016143	fubp1	67	58.462	ENSJJAG00000020069	Fubp1	84	47.350	Jaculus_jaculus
ENSEBUG00000016143	fubp1	67	58.904	ENSKMAG00000018897	fubp1	65	70.909	Kryptolebias_marmoratus
ENSEBUG00000016143	fubp1	64	63.235	ENSLBEG00000012700	fubp1	68	65.152	Labrus_bergylta
ENSEBUG00000016143	fubp1	64	66.667	ENSLOCG00000003745	fubp1	85	47.878	Lepisosteus_oculatus
ENSEBUG00000016143	fubp1	64	65.152	ENSLAFG00000003273	FUBP1	79	47.559	Loxodonta_africana
ENSEBUG00000016143	fubp1	64	65.152	ENSMFAG00000031825	FUBP1	83	47.645	Macaca_fascicularis
ENSEBUG00000016143	fubp1	64	67.742	ENSMMUG00000002899	FUBP1	86	46.101	Macaca_mulatta
ENSEBUG00000016143	fubp1	64	65.152	ENSMNEG00000045212	FUBP1	82	55.844	Macaca_nemestrina
ENSEBUG00000016143	fubp1	64	61.194	ENSMAMG00000007489	fubp1	77	68.254	Mastacembelus_armatus
ENSEBUG00000016143	fubp1	64	62.687	ENSMZEG00005024298	fubp1	64	74.074	Maylandia_zebra
ENSEBUG00000016143	fubp1	64	58.462	ENSMGAG00000009424	FUBP1	88	45.936	Meleagris_gallopavo
ENSEBUG00000016143	fubp1	64	65.152	ENSMAUG00000016428	Fubp1	84	46.691	Mesocricetus_auratus
ENSEBUG00000016143	fubp1	64	65.152	ENSMOCG00000014751	Fubp1	85	47.826	Microtus_ochrogaster
ENSEBUG00000016143	fubp1	64	62.069	ENSMMOG00000019463	fubp1	74	70.370	Mola_mola
ENSEBUG00000016143	fubp1	74	65.152	ENSMODG00000020804	FUBP1	66	68.333	Monodelphis_domestica
ENSEBUG00000016143	fubp1	65	63.768	ENSMALG00000015173	fubp1	67	72.222	Monopterus_albus
ENSEBUG00000016143	fubp1	64	58.462	MGP_CAROLIEiJ_G0025740	Fubp1	83	47.748	Mus_caroli
ENSEBUG00000016143	fubp1	64	58.462	ENSMUSG00000028034	Fubp1	83	46.847	Mus_musculus
ENSEBUG00000016143	fubp1	64	65.152	MGP_PahariEiJ_G0027191	Fubp1	83	47.568	Mus_pahari
ENSEBUG00000016143	fubp1	64	58.462	MGP_SPRETEiJ_G0026693	Fubp1	83	47.027	Mus_spretus
ENSEBUG00000016143	fubp1	64	67.742	ENSMLUG00000014802	FUBP1	83	45.377	Myotis_lucifugus
ENSEBUG00000016143	fubp1	64	65.152	ENSNGAG00000014302	Fubp1	90	46.034	Nannospalax_galili
ENSEBUG00000016143	fubp1	54	57.550	ENSNBRG00000015099	fubp1	58	57.550	Neolamprologus_brichardi
ENSEBUG00000016143	fubp1	65	65.152	ENSNLEG00000009772	FUBP1	83	46.403	Nomascus_leucogenys
ENSEBUG00000016143	fubp1	66	62.667	ENSOPRG00000001175	FUBP1	62	68.333	Ochotona_princeps
ENSEBUG00000016143	fubp1	64	58.462	ENSODEG00000002600	-	81	47.740	Octodon_degus
ENSEBUG00000016143	fubp1	78	37.925	ENSODEG00000003657	-	61	41.176	Octodon_degus
ENSEBUG00000016143	fubp1	64	62.687	ENSONIG00000018381	fubp1	62	68.254	Oreochromis_niloticus
ENSEBUG00000016143	fubp1	65	66.176	ENSOANG00000009777	FUBP1	92	66.667	Ornithorhynchus_anatinus
ENSEBUG00000016143	fubp1	59	84.615	ENSORLG00000003540	fubp1	63	78.125	Oryzias_latipes
ENSEBUG00000016143	fubp1	58	82.759	ENSORLG00020005908	fubp1	88	45.951	Oryzias_latipes_hni
ENSEBUG00000016143	fubp1	63	65.000	ENSORLG00015008779	fubp1	74	62.121	Oryzias_latipes_hsok
ENSEBUG00000016143	fubp1	63	65.000	ENSOMEG00000021943	fubp1	90	43.886	Oryzias_melastigma
ENSEBUG00000016143	fubp1	64	65.152	ENSOGAG00000014233	FUBP1	80	47.397	Otolemur_garnettii
ENSEBUG00000016143	fubp1	64	65.152	ENSOARG00000013259	FUBP1	83	66.667	Ovis_aries
ENSEBUG00000016143	fubp1	64	65.152	ENSPPRG00000000413	FUBP1	86	46.274	Panthera_pardus
ENSEBUG00000016143	fubp1	64	65.152	ENSPTIG00000019450	FUBP1	86	46.274	Panthera_tigris_altaica
ENSEBUG00000016143	fubp1	64	57.303	ENSPSIG00000012965	FUBP1	90	46.416	Pelodiscus_sinensis
ENSEBUG00000016143	fubp1	78	47.407	ENSPMGG00000009060	fubp1	85	48.231	Periophthalmus_magnuspinnatus
ENSEBUG00000016143	fubp1	64	65.152	ENSPEMG00000021802	Fubp1	85	46.034	Peromyscus_maniculatus_bairdii
ENSEBUG00000016143	fubp1	51	70.186	ENSPMAG00000001644	-	65	70.186	Petromyzon_marinus
ENSEBUG00000016143	fubp1	68	61.429	ENSPFOG00000000238	fubp1	68	67.188	Poecilia_formosa
ENSEBUG00000016143	fubp1	63	68.966	ENSPLAG00000021170	fubp1	68	73.529	Poecilia_latipinna
ENSEBUG00000016143	fubp1	79	47.619	ENSPMEG00000004747	fubp1	85	47.091	Poecilia_mexicana
ENSEBUG00000016143	fubp1	63	67.797	ENSPREG00000017911	fubp1	96	46.555	Poecilia_reticulata
ENSEBUG00000016143	fubp1	59	55.155	ENSPPYG00000001219	-	53	58.310	Pongo_abelii
ENSEBUG00000016143	fubp1	64	58.462	ENSPCAG00000012617	FUBP1	81	47.559	Procavia_capensis
ENSEBUG00000016143	fubp1	66	65.152	ENSPCOG00000024974	FUBP1	86	46.274	Propithecus_coquereli
ENSEBUG00000016143	fubp1	65	65.217	ENSPVAG00000014637	FUBP1	62	68.333	Pteropus_vampyrus
ENSEBUG00000016143	fubp1	65	67.241	ENSPNYG00000004552	fubp1	70	74.074	Pundamilia_nyererei
ENSEBUG00000016143	fubp1	64	66.667	ENSPNAG00000016207	fubp1	87	48.925	Pygocentrus_nattereri
ENSEBUG00000016143	fubp1	64	58.462	ENSRNOG00000043370	Fubp1	83	47.568	Rattus_norvegicus
ENSEBUG00000016143	fubp1	65	65.152	ENSRBIG00000042950	FUBP1	86	46.101	Rhinopithecus_bieti
ENSEBUG00000016143	fubp1	65	65.152	ENSRROG00000043534	FUBP1	86	46.101	Rhinopithecus_roxellana
ENSEBUG00000016143	fubp1	65	65.152	ENSSBOG00000027299	FUBP1	97	46.875	Saimiri_boliviensis_boliviensis
ENSEBUG00000016143	fubp1	64	65.152	ENSSHAG00000005367	FUBP1	96	47.101	Sarcophilus_harrisii
ENSEBUG00000016143	fubp1	63	69.643	ENSSFOG00015010213	fubp1	82	51.412	Scleropages_formosus
ENSEBUG00000016143	fubp1	64	56.757	ENSSMAG00000012029	fubp1	63	64.286	Scophthalmus_maximus
ENSEBUG00000016143	fubp1	64	67.797	ENSSDUG00000007383	fubp1	64	70.909	Seriola_dumerili
ENSEBUG00000016143	fubp1	64	63.235	ENSSLDG00000022863	fubp1	70	65.625	Seriola_lalandi_dorsalis
ENSEBUG00000016143	fubp1	64	63.934	ENSSARG00000011730	FUBP1	53	70.000	Sorex_araneus
ENSEBUG00000016143	fubp1	64	65.672	ENSSPAG00000010161	fubp1	68	68.254	Stegastes_partitus
ENSEBUG00000016143	fubp1	64	58.462	ENSTGUG00000006841	FUBP1	68	70.000	Taeniopygia_guttata
ENSEBUG00000016143	fubp1	67	55.733	ENSTRUG00000004615	fubp1	68	55.733	Takifugu_rubripes
ENSEBUG00000016143	fubp1	50	63.095	ENSTNIG00000019815	-	98	63.095	Tetraodon_nigroviridis
ENSEBUG00000016143	fubp1	64	65.152	ENSTTRG00000000096	FUBP1	81	47.197	Tursiops_truncatus
ENSEBUG00000016143	fubp1	64	65.152	ENSVPAG00000004709	FUBP1	82	47.197	Vicugna_pacos
ENSEBUG00000016143	fubp1	78	46.476	ENSXMAG00000007168	fubp1	96	46.082	Xiphophorus_maculatus