EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016192 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3 (1 of many)
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 76870 bases
Position: chrFYBX02010002.1:1878025-1954894
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026280	KH_1	PF00013.29	7.6e-44	1	2
ENSEBUP00000026280	KH_1	PF00013.29	7.6e-44	2	2
ENSEBUP00000026294	KH_1	PF00013.29	9.1e-44	1	2
ENSEBUP00000026294	KH_1	PF00013.29	9.1e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026856	-	2454	-	ENSEBUP00000026280	270 (aa)	-	-
ENSEBUT00000026870	-	3533	-	ENSEBUP00000026294	281 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016192	pcbp3	97	39.130	ENSEBUG00000012796	IGF2BP3	66	37.405
ENSEBUG00000016192	pcbp3	96	85.938	ENSEBUG00000005495	pcbp3	57	85.938
ENSEBUG00000016192	pcbp3	99	73.408	ENSEBUG00000007485	-	75	73.381
ENSEBUG00000016192	pcbp3	81	68.293	ENSEBUG00000009697	zgc:110045	81	68.293
ENSEBUG00000016192	pcbp3	94	36.000	ENSEBUG00000013440	-	51	36.000
ENSEBUG00000016192	pcbp3	78	38.554	ENSEBUG00000012405	NOVA2	59	37.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016192	pcbp3	99	73.978	ENSAPOG00000016582	-	91	73.704	Acanthochromis_polyacanthus
ENSEBUG00000016192	pcbp3	99	75.000	ENSAPOG00000020003	pcbp3	78	73.188	Acanthochromis_polyacanthus
ENSEBUG00000016192	pcbp3	99	70.035	ENSAMEG00000001697	-	96	66.667	Ailuropoda_melanoleuca
ENSEBUG00000016192	pcbp3	99	68.729	ENSACIG00000010933	pcbp3	87	67.110	Amphilophus_citrinellus
ENSEBUG00000016192	pcbp3	99	72.464	ENSACIG00000002739	-	88	72.125	Amphilophus_citrinellus
ENSEBUG00000016192	pcbp3	99	75.000	ENSAOCG00000008592	-	93	75.000	Amphiprion_ocellaris
ENSEBUG00000016192	pcbp3	99	70.968	ENSAOCG00000007806	-	99	70.345	Amphiprion_ocellaris
ENSEBUG00000016192	pcbp3	99	68.836	ENSAPEG00000008011	pcbp3	91	68.836	Amphiprion_percula
ENSEBUG00000016192	pcbp3	99	73.978	ENSAPEG00000005209	-	87	73.571	Amphiprion_percula
ENSEBUG00000016192	pcbp3	99	73.978	ENSATEG00000009833	-	88	73.571	Anabas_testudineus
ENSEBUG00000016192	pcbp3	99	69.072	ENSATEG00000015787	-	89	69.072	Anabas_testudineus
ENSEBUG00000016192	pcbp3	99	62.975	ENSAPLG00000008951	-	77	62.975	Anas_platyrhynchos
ENSEBUG00000016192	pcbp3	99	71.631	ENSAPLG00000002975	-	96	71.331	Anas_platyrhynchos
ENSEBUG00000016192	pcbp3	99	68.729	ENSACAG00000009819	-	95	67.881	Anolis_carolinensis
ENSEBUG00000016192	pcbp3	99	64.952	ENSACAG00000004607	-	96	64.907	Anolis_carolinensis
ENSEBUG00000016192	pcbp3	85	75.000	ENSANAG00000030702	-	100	75.000	Aotus_nancymaae
ENSEBUG00000016192	pcbp3	99	74.721	ENSACLG00000003801	-	95	74.286	Astatotilapia_calliptera
ENSEBUG00000016192	pcbp3	99	68.493	ENSACLG00000011835	pcbp3	93	66.887	Astatotilapia_calliptera
ENSEBUG00000016192	pcbp3	99	61.258	ENSAMXG00000001760	zgc:110045	67	61.184	Astyanax_mexicanus
ENSEBUG00000016192	pcbp3	99	67.808	ENSAMXG00000003440	pcbp3	91	67.808	Astyanax_mexicanus
ENSEBUG00000016192	pcbp3	99	73.881	ENSAMXG00000013588	-	88	73.881	Astyanax_mexicanus
ENSEBUG00000016192	pcbp3	96	70.531	ENSCAFG00020019472	-	83	70.531	Canis_lupus_dingo
ENSEBUG00000016192	pcbp3	99	74.721	ENSCSAG00000007440	-	87	74.286	Chlorocebus_sabaeus
ENSEBUG00000016192	pcbp3	99	75.093	ENSCPBG00000012151	-	96	69.900	Chrysemys_picta_bellii
ENSEBUG00000016192	pcbp3	99	68.621	ENSCPBG00000000733	-	71	68.493	Chrysemys_picta_bellii
ENSEBUG00000016192	pcbp3	99	74.349	ENSCSEG00000000822	pcbp3	87	74.349	Cynoglossus_semilaevis
ENSEBUG00000016192	pcbp3	99	60.390	ENSCSEG00000016984	-	90	60.390	Cynoglossus_semilaevis
ENSEBUG00000016192	pcbp3	99	73.978	ENSCVAG00000005262	-	87	73.571	Cyprinodon_variegatus
ENSEBUG00000016192	pcbp3	99	69.072	ENSCVAG00000014482	pcbp3	91	69.072	Cyprinodon_variegatus
ENSEBUG00000016192	pcbp3	99	68.151	ENSDARG00000054378	pcbp3	96	67.987	Danio_rerio
ENSEBUG00000016192	pcbp3	85	75.417	ENSETEG00000015988	-	75	75.417	Echinops_telfairi
ENSEBUG00000016192	pcbp3	99	69.343	ENSELUG00000003521	pcbp3	91	68.942	Esox_lucius
ENSEBUG00000016192	pcbp3	99	73.606	ENSELUG00000001560	-	82	73.606	Esox_lucius
ENSEBUG00000016192	pcbp3	99	62.975	ENSFALG00000004411	-	73	62.893	Ficedula_albicollis
ENSEBUG00000016192	pcbp3	99	75.373	ENSFALG00000003949	-	96	74.910	Ficedula_albicollis
ENSEBUG00000016192	pcbp3	99	73.978	ENSFHEG00000006539	-	87	73.571	Fundulus_heteroclitus
ENSEBUG00000016192	pcbp3	99	75.281	ENSFHEG00000016615	pcbp3	85	75.185	Fundulus_heteroclitus
ENSEBUG00000016192	pcbp3	87	60.236	ENSGMOG00000008611	-	77	60.236	Gadus_morhua
ENSEBUG00000016192	pcbp3	99	60.345	ENSGMOG00000011992	pcbp3	92	60.345	Gadus_morhua
ENSEBUG00000016192	pcbp3	99	68.729	ENSGALG00000013155	-	93	67.327	Gallus_gallus
ENSEBUG00000016192	pcbp3	99	65.161	ENSGALG00000004394	-	89	75.595	Gallus_gallus
ENSEBUG00000016192	pcbp3	99	73.606	ENSGAFG00000010274	-	91	73.333	Gambusia_affinis
ENSEBUG00000016192	pcbp3	99	69.072	ENSGAFG00000011430	pcbp3	85	68.581	Gambusia_affinis
ENSEBUG00000016192	pcbp3	99	59.547	ENSGACG00000014955	-	96	58.125	Gasterosteus_aculeatus
ENSEBUG00000016192	pcbp3	99	69.930	ENSGACG00000002266	-	96	69.000	Gasterosteus_aculeatus
ENSEBUG00000016192	pcbp3	98	74.340	ENSGAGG00000000271	-	99	74.340	Gopherus_agassizii
ENSEBUG00000016192	pcbp3	87	68.156	ENSGAGG00000006956	-	71	68.156	Gopherus_agassizii
ENSEBUG00000016192	pcbp3	99	74.906	ENSHBUG00000010697	pcbp3	93	67.110	Haplochromis_burtoni
ENSEBUG00000016192	pcbp3	99	74.721	ENSHBUG00000021782	-	95	74.286	Haplochromis_burtoni
ENSEBUG00000016192	pcbp3	99	69.310	ENSHCOG00000017868	pcbp3	91	69.310	Hippocampus_comes
ENSEBUG00000016192	pcbp3	99	69.892	ENSHCOG00000006067	-	95	69.892	Hippocampus_comes
ENSEBUG00000016192	pcbp3	99	73.978	ENSIPUG00000006238	pcbp3	96	67.987	Ictalurus_punctatus
ENSEBUG00000016192	pcbp3	99	68.836	ENSKMAG00000003046	pcbp3	91	68.836	Kryptolebias_marmoratus
ENSEBUG00000016192	pcbp3	99	73.234	ENSKMAG00000018530	-	93	73.234	Kryptolebias_marmoratus
ENSEBUG00000016192	pcbp3	99	74.627	ENSLBEG00000006201	pcbp3	86	73.551	Labrus_bergylta
ENSEBUG00000016192	pcbp3	89	67.347	ENSLBEG00000006542	-	86	67.969	Labrus_bergylta
ENSEBUG00000016192	pcbp3	99	64.537	ENSLACG00000010804	zgc:110045	72	64.537	Latimeria_chalumnae
ENSEBUG00000016192	pcbp3	99	63.376	ENSLACG00000010386	pcbp3	72	63.376	Latimeria_chalumnae
ENSEBUG00000016192	pcbp3	99	68.276	ENSLOCG00000005058	zgc:110045	85	68.276	Lepisosteus_oculatus
ENSEBUG00000016192	pcbp3	99	69.097	ENSLOCG00000009369	pcbp3	96	68.896	Lepisosteus_oculatus
ENSEBUG00000016192	pcbp3	99	75.281	ENSMAMG00000022336	pcbp3	83	74.815	Mastacembelus_armatus
ENSEBUG00000016192	pcbp3	99	73.978	ENSMAMG00000011620	-	88	73.571	Mastacembelus_armatus
ENSEBUG00000016192	pcbp3	99	66.544	ENSMZEG00005014882	-	88	66.182	Maylandia_zebra
ENSEBUG00000016192	pcbp3	99	68.729	ENSMZEG00005008993	pcbp3	85	68.621	Maylandia_zebra
ENSEBUG00000016192	pcbp3	99	62.975	ENSMGAG00000006794	-	73	62.893	Meleagris_gallopavo
ENSEBUG00000016192	pcbp3	99	60.518	ENSMGAG00000001883	-	93	61.812	Meleagris_gallopavo
ENSEBUG00000016192	pcbp3	99	73.606	ENSMMOG00000005216	-	89	73.214	Mola_mola
ENSEBUG00000016192	pcbp3	99	75.281	ENSMMOG00000000730	pcbp3	75	75.281	Mola_mola
ENSEBUG00000016192	pcbp3	64	61.860	ENSMODG00000027884	-	93	61.860	Monodelphis_domestica
ENSEBUG00000016192	pcbp3	99	68.966	ENSMALG00000000691	pcbp3	85	68.966	Monopterus_albus
ENSEBUG00000016192	pcbp3	99	70.383	ENSMPUG00000001779	-	82	70.134	Mustela_putorius_furo
ENSEBUG00000016192	pcbp3	100	66.182	ENSNBRG00000016714	-	90	66.780	Neolamprologus_brichardi
ENSEBUG00000016192	pcbp3	99	68.966	ENSNBRG00000016409	-	87	67.333	Neolamprologus_brichardi
ENSEBUG00000016192	pcbp3	99	64.725	ENSOPRG00000003431	-	90	64.725	Ochotona_princeps
ENSEBUG00000016192	pcbp3	99	64.725	ENSONIG00000012122	-	93	64.725	Oreochromis_niloticus
ENSEBUG00000016192	pcbp3	99	74.721	ENSONIG00000004611	-	95	74.286	Oreochromis_niloticus
ENSEBUG00000016192	pcbp3	99	75.000	ENSOCUG00000002696	-	87	74.552	Oryctolagus_cuniculus
ENSEBUG00000016192	pcbp3	99	73.606	ENSORLG00000022739	-	95	73.214	Oryzias_latipes
ENSEBUG00000016192	pcbp3	99	75.000	ENSORLG00000000059	pcbp3	95	75.000	Oryzias_latipes
ENSEBUG00000016192	pcbp3	99	73.234	ENSORLG00020006124	-	95	72.857	Oryzias_latipes_hni
ENSEBUG00000016192	pcbp3	99	75.000	ENSORLG00020012671	pcbp3	93	75.000	Oryzias_latipes_hni
ENSEBUG00000016192	pcbp3	99	73.606	ENSORLG00015008051	-	93	71.685	Oryzias_latipes_hsok
ENSEBUG00000016192	pcbp3	99	75.000	ENSORLG00015000429	pcbp3	93	75.000	Oryzias_latipes_hsok
ENSEBUG00000016192	pcbp3	99	73.606	ENSOMEG00000020162	-	95	73.571	Oryzias_melastigma
ENSEBUG00000016192	pcbp3	99	75.000	ENSOMEG00000020811	pcbp3	92	75.000	Oryzias_melastigma
ENSEBUG00000016192	pcbp3	99	64.537	ENSOGAG00000008044	-	96	64.506	Otolemur_garnettii
ENSEBUG00000016192	pcbp3	79	71.154	ENSPKIG00000020913	-	70	71.154	Paramormyrops_kingsleyae
ENSEBUG00000016192	pcbp3	99	74.627	ENSPKIG00000019329	pcbp3	90	74.627	Paramormyrops_kingsleyae
ENSEBUG00000016192	pcbp3	82	70.204	ENSPSIG00000008350	-	68	70.040	Pelodiscus_sinensis
ENSEBUG00000016192	pcbp3	99	62.500	ENSPSIG00000014970	-	96	63.176	Pelodiscus_sinensis
ENSEBUG00000016192	pcbp3	99	68.621	ENSPMGG00000022383	pcbp3	91	68.621	Periophthalmus_magnuspinnatus
ENSEBUG00000016192	pcbp3	77	73.203	ENSPMAG00000004637	-	93	73.203	Petromyzon_marinus
ENSEBUG00000016192	pcbp3	99	82.288	ENSPMAG00000004551	pcbp3	78	82.288	Petromyzon_marinus
ENSEBUG00000016192	pcbp3	99	68.836	ENSPCIG00000028092	-	96	68.647	Phascolarctos_cinereus
ENSEBUG00000016192	pcbp3	99	71.134	ENSPLAG00000004074	-	83	71.134	Poecilia_latipinna
ENSEBUG00000016192	pcbp3	99	65.472	ENSPLAG00000011449	pcbp3	80	65.064	Poecilia_latipinna
ENSEBUG00000016192	pcbp3	99	67.987	ENSPMEG00000006653	-	90	68.317	Poecilia_mexicana
ENSEBUG00000016192	pcbp3	99	69.072	ENSPMEG00000021239	pcbp3	82	68.966	Poecilia_mexicana
ENSEBUG00000016192	pcbp3	99	73.978	ENSPREG00000020585	-	89	73.929	Poecilia_reticulata
ENSEBUG00000016192	pcbp3	99	75.000	ENSPREG00000015736	pcbp3	87	75.000	Poecilia_reticulata
ENSEBUG00000016192	pcbp3	99	74.721	ENSPNYG00000013205	-	89	74.286	Pundamilia_nyererei
ENSEBUG00000016192	pcbp3	99	74.627	ENSPNYG00000012326	pcbp3	82	74.627	Pundamilia_nyererei
ENSEBUG00000016192	pcbp3	99	73.881	ENSPNAG00000015104	pcbp3	95	73.214	Pygocentrus_nattereri
ENSEBUG00000016192	pcbp3	99	73.783	ENSPNAG00000008541	-	87	73.783	Pygocentrus_nattereri
ENSEBUG00000016192	pcbp3	99	74.721	ENSRNOG00000001245	Pcbp3	96	74.286	Rattus_norvegicus
ENSEBUG00000016192	pcbp3	99	69.343	ENSRBIG00000028177	-	87	60.429	Rhinopithecus_bieti
ENSEBUG00000016192	pcbp3	99	70.035	ENSSHAG00000007890	-	96	69.799	Sarcophilus_harrisii
ENSEBUG00000016192	pcbp3	99	74.254	ENSSFOG00015010205	pcbp3	90	74.254	Scleropages_formosus
ENSEBUG00000016192	pcbp3	99	72.388	ENSSFOG00015007118	-	82	72.388	Scleropages_formosus
ENSEBUG00000016192	pcbp3	99	68.041	ENSSFOG00015014706	pcbp3	85	66.890	Scleropages_formosus
ENSEBUG00000016192	pcbp3	99	75.000	ENSSMAG00000011929	pcbp3	86	75.000	Scophthalmus_maximus
ENSEBUG00000016192	pcbp3	99	73.978	ENSSMAG00000003135	-	95	73.571	Scophthalmus_maximus
ENSEBUG00000016192	pcbp3	99	69.118	ENSSDUG00000008502	-	85	67.857	Seriola_dumerili
ENSEBUG00000016192	pcbp3	99	69.072	ENSSDUG00000011608	pcbp3	88	69.072	Seriola_dumerili
ENSEBUG00000016192	pcbp3	99	73.978	ENSSLDG00000020161	-	91	73.704	Seriola_lalandi_dorsalis
ENSEBUG00000016192	pcbp3	99	69.072	ENSSLDG00000008518	pcbp3	88	69.072	Seriola_lalandi_dorsalis
ENSEBUG00000016192	pcbp3	99	68.621	ENSSPUG00000013214	-	91	68.621	Sphenodon_punctatus
ENSEBUG00000016192	pcbp3	99	70.968	ENSSPAG00000004190	-	99	70.690	Stegastes_partitus
ENSEBUG00000016192	pcbp3	99	58.076	ENSSPAG00000023341	-	84	57.191	Stegastes_partitus
ENSEBUG00000016192	pcbp3	100	69.655	ENSTGUG00000003316	-	88	69.435	Taeniopygia_guttata
ENSEBUG00000016192	pcbp3	99	74.349	ENSTGUG00000008158	-	96	73.214	Taeniopygia_guttata
ENSEBUG00000016192	pcbp3	99	74.349	ENSTRUG00000006280	-	89	73.929	Takifugu_rubripes
ENSEBUG00000016192	pcbp3	99	71.174	ENSTRUG00000013604	pcbp3	84	69.896	Takifugu_rubripes
ENSEBUG00000016192	pcbp3	99	64.194	ENSTTRG00000015075	-	96	64.174	Tursiops_truncatus
ENSEBUG00000016192	pcbp3	99	70.486	ENSXETG00000011483	pcbp1	96	70.234	Xenopus_tropicalis
ENSEBUG00000016192	pcbp3	99	62.222	ENSXETG00000010491	pcbp2	69	62.222	Xenopus_tropicalis
ENSEBUG00000016192	pcbp3	99	68.966	ENSXCOG00000020481	pcbp3	82	68.966	Xiphophorus_couchianus
ENSEBUG00000016192	pcbp3	99	68.836	ENSXMAG00000008175	pcbp3	91	68.836	Xiphophorus_maculatus
ENSEBUG00000016192	pcbp3	99	73.978	ENSXMAG00000028711	-	91	73.704	Xiphophorus_maculatus