EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016262 (Gene tree)
Gene ID: -
Gene Symbol: polr2c
Alias: wu:fk48d01
Full Name: polymerase (RNA) II (DNA directed) polypeptide C
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 63128 bases
Position: chrFYBX02008326.1:638790-701917
Accession: ZDB-GENE-030131-6609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026402	RNA_pol_A_bac	PF01000.26	6.3e-37	1	1
ENSEBUP00000026402	RNA_pol_L	PF01193.24	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000026978	-	759	-	ENSEBUP00000026402	252 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016262	polr2c	100	77.455	ENSG00000102978	POLR2C	100	77.455	Homo_sapiens
ENSEBUG00000016262	polr2c	100	76.364	ENSAPOG00000011708	polr2c	100	76.364	Acanthochromis_polyacanthus
ENSEBUG00000016262	polr2c	100	77.818	ENSAMEG00000017026	POLR2C	100	77.818	Ailuropoda_melanoleuca
ENSEBUG00000016262	polr2c	100	76.000	ENSACIG00000012060	polr2c	100	76.000	Amphilophus_citrinellus
ENSEBUG00000016262	polr2c	89	82.589	ENSAOCG00000018000	-	85	82.589	Amphiprion_ocellaris
ENSEBUG00000016262	polr2c	100	76.364	ENSAOCG00000015665	polr2c	100	76.364	Amphiprion_ocellaris
ENSEBUG00000016262	polr2c	100	76.364	ENSAOCG00000010477	-	100	76.364	Amphiprion_ocellaris
ENSEBUG00000016262	polr2c	100	76.364	ENSAPEG00000007221	polr2c	100	76.364	Amphiprion_percula
ENSEBUG00000016262	polr2c	100	76.000	ENSATEG00000007143	polr2c	100	76.000	Anabas_testudineus
ENSEBUG00000016262	polr2c	89	83.482	ENSAPLG00000005385	POLR2C	81	83.482	Anas_platyrhynchos
ENSEBUG00000016262	polr2c	76	63.158	ENSACAG00000011302	-	97	63.158	Anolis_carolinensis
ENSEBUG00000016262	polr2c	100	76.727	ENSACAG00000007514	-	100	76.727	Anolis_carolinensis
ENSEBUG00000016262	polr2c	100	77.455	ENSANAG00000005302	POLR2C	100	77.455	Aotus_nancymaae
ENSEBUG00000016262	polr2c	100	76.000	ENSACLG00000004854	polr2c	100	76.000	Astatotilapia_calliptera
ENSEBUG00000016262	polr2c	100	77.091	ENSAMXG00000012805	polr2c	100	77.091	Astyanax_mexicanus
ENSEBUG00000016262	polr2c	100	77.818	ENSBTAG00000001856	POLR2C	100	77.818	Bos_taurus
ENSEBUG00000016262	polr2c	98	50.181	WBGene00007971	rpb-3	98	50.181	Caenorhabditis_elegans
ENSEBUG00000016262	polr2c	100	77.455	ENSCJAG00000012016	POLR2C	100	77.455	Callithrix_jacchus
ENSEBUG00000016262	polr2c	100	77.818	ENSCAFG00000008720	POLR2C	100	77.818	Canis_familiaris
ENSEBUG00000016262	polr2c	100	77.818	ENSCAFG00020007660	POLR2C	100	77.818	Canis_lupus_dingo
ENSEBUG00000016262	polr2c	100	77.818	ENSCHIG00000012072	POLR2C	100	77.818	Capra_hircus
ENSEBUG00000016262	polr2c	100	76.000	ENSTSYG00000011076	POLR2C	100	76.000	Carlito_syrichta
ENSEBUG00000016262	polr2c	75	84.737	ENSCAPG00000006608	POLR2C	82	84.737	Cavia_aperea
ENSEBUG00000016262	polr2c	100	77.818	ENSCPOG00000004554	POLR2C	100	77.818	Cavia_porcellus
ENSEBUG00000016262	polr2c	100	77.455	ENSCCAG00000035768	POLR2C	100	77.455	Cebus_capucinus
ENSEBUG00000016262	polr2c	100	77.455	ENSCATG00000040803	POLR2C	100	77.455	Cercocebus_atys
ENSEBUG00000016262	polr2c	100	77.818	ENSCLAG00000013676	POLR2C	100	77.818	Chinchilla_lanigera
ENSEBUG00000016262	polr2c	100	77.455	ENSCSAG00000004901	POLR2C	100	77.455	Chlorocebus_sabaeus
ENSEBUG00000016262	polr2c	100	73.091	ENSCHOG00000002986	POLR2C	100	73.091	Choloepus_hoffmanni
ENSEBUG00000016262	polr2c	89	84.375	ENSCPBG00000022758	POLR2C	85	84.375	Chrysemys_picta_bellii
ENSEBUG00000016262	polr2c	94	58.657	ENSCING00000021895	-	99	58.657	Ciona_intestinalis
ENSEBUG00000016262	polr2c	59	72.848	ENSCING00000009812	-	100	72.848	Ciona_intestinalis
ENSEBUG00000016262	polr2c	100	64.260	ENSCSAVG00000002167	-	100	72.034	Ciona_savignyi
ENSEBUG00000016262	polr2c	100	77.455	ENSCANG00000034876	POLR2C	100	77.455	Colobus_angolensis_palliatus
ENSEBUG00000016262	polr2c	100	77.455	ENSCGRG00001019477	Polr2c	100	77.455	Cricetulus_griseus_chok1gshd
ENSEBUG00000016262	polr2c	100	77.455	ENSCGRG00000013273	Polr2c	100	77.455	Cricetulus_griseus_crigri
ENSEBUG00000016262	polr2c	100	74.545	ENSCSEG00000001719	polr2c	100	74.545	Cynoglossus_semilaevis
ENSEBUG00000016262	polr2c	100	76.000	ENSCVAG00000004718	-	100	76.000	Cyprinodon_variegatus
ENSEBUG00000016262	polr2c	71	74.384	ENSCVAG00000017931	polr2c	82	74.384	Cyprinodon_variegatus
ENSEBUG00000016262	polr2c	100	75.273	ENSDARG00000033596	polr2c	100	75.273	Danio_rerio
ENSEBUG00000016262	polr2c	100	77.818	ENSDNOG00000030752	-	81	77.818	Dasypus_novemcinctus
ENSEBUG00000016262	polr2c	94	47.510	ENSDNOG00000036028	-	99	47.510	Dasypus_novemcinctus
ENSEBUG00000016262	polr2c	100	77.818	ENSDORG00000000081	Polr2c	100	77.818	Dipodomys_ordii
ENSEBUG00000016262	polr2c	99	62.545	FBgn0026373	RpII33	100	62.545	Drosophila_melanogaster
ENSEBUG00000016262	polr2c	100	66.192	ENSETEG00000004185	POLR2C	100	66.192	Echinops_telfairi
ENSEBUG00000016262	polr2c	100	77.455	ENSEASG00005005406	POLR2C	100	77.455	Equus_asinus_asinus
ENSEBUG00000016262	polr2c	100	77.818	ENSECAG00000015818	POLR2C	100	77.818	Equus_caballus
ENSEBUG00000016262	polr2c	100	67.260	ENSEEUG00000003658	POLR2C	100	67.260	Erinaceus_europaeus
ENSEBUG00000016262	polr2c	100	74.182	ENSELUG00000012259	polr2c	100	74.182	Esox_lucius
ENSEBUG00000016262	polr2c	100	77.818	ENSFCAG00000034622	POLR2C	100	77.818	Felis_catus
ENSEBUG00000016262	polr2c	100	76.364	ENSFALG00000006931	POLR2C	100	76.364	Ficedula_albicollis
ENSEBUG00000016262	polr2c	100	79.323	ENSFDAG00000008641	POLR2C	100	79.323	Fukomys_damarensis
ENSEBUG00000016262	polr2c	100	76.727	ENSFHEG00000020739	polr2c	100	76.727	Fundulus_heteroclitus
ENSEBUG00000016262	polr2c	100	76.364	ENSGMOG00000004203	polr2c	100	76.364	Gadus_morhua
ENSEBUG00000016262	polr2c	100	76.364	ENSGALG00000001168	POLR2C	100	76.364	Gallus_gallus
ENSEBUG00000016262	polr2c	100	76.727	ENSGAFG00000021951	polr2c	100	76.727	Gambusia_affinis
ENSEBUG00000016262	polr2c	100	76.364	ENSGACG00000002194	polr2c	100	76.364	Gasterosteus_aculeatus
ENSEBUG00000016262	polr2c	93	81.624	ENSGAGG00000016942	POLR2C	83	81.624	Gopherus_agassizii
ENSEBUG00000016262	polr2c	100	77.455	ENSGGOG00000012415	POLR2C	100	77.455	Gorilla_gorilla
ENSEBUG00000016262	polr2c	100	76.000	ENSHBUG00000023040	polr2c	100	76.000	Haplochromis_burtoni
ENSEBUG00000016262	polr2c	100	77.818	ENSHGLG00000013465	POLR2C	100	77.818	Heterocephalus_glaber_female
ENSEBUG00000016262	polr2c	56	30.968	ENSHGLG00000019441	POLR1C	57	30.968	Heterocephalus_glaber_female
ENSEBUG00000016262	polr2c	56	30.968	ENSHGLG00100005970	POLR1C	57	30.968	Heterocephalus_glaber_male
ENSEBUG00000016262	polr2c	100	77.818	ENSHGLG00100011949	POLR2C	100	77.818	Heterocephalus_glaber_male
ENSEBUG00000016262	polr2c	100	74.182	ENSHCOG00000007066	polr2c	100	74.182	Hippocampus_comes
ENSEBUG00000016262	polr2c	100	76.727	ENSIPUG00000009231	polr2c	100	76.727	Ictalurus_punctatus
ENSEBUG00000016262	polr2c	100	69.173	ENSSTOG00000031354	-	100	69.173	Ictidomys_tridecemlineatus
ENSEBUG00000016262	polr2c	100	77.818	ENSSTOG00000015150	-	100	77.818	Ictidomys_tridecemlineatus
ENSEBUG00000016262	polr2c	100	77.455	ENSJJAG00000023057	Polr2c	100	77.455	Jaculus_jaculus
ENSEBUG00000016262	polr2c	100	77.091	ENSKMAG00000016196	polr2c	100	77.091	Kryptolebias_marmoratus
ENSEBUG00000016262	polr2c	100	76.000	ENSLBEG00000007369	polr2c	100	76.000	Labrus_bergylta
ENSEBUG00000016262	polr2c	100	66.460	ENSLACG00000003703	POLR2C	99	66.460	Latimeria_chalumnae
ENSEBUG00000016262	polr2c	100	76.727	ENSLOCG00000003215	polr2c	100	76.727	Lepisosteus_oculatus
ENSEBUG00000016262	polr2c	100	77.091	ENSLAFG00000027230	POLR2C	100	77.091	Loxodonta_africana
ENSEBUG00000016262	polr2c	100	78.022	ENSMFAG00000016861	POLR2C	100	78.022	Macaca_fascicularis
ENSEBUG00000016262	polr2c	100	78.022	ENSMMUG00000020474	POLR2C	100	78.022	Macaca_mulatta
ENSEBUG00000016262	polr2c	100	77.455	ENSMNEG00000033565	POLR2C	100	77.455	Macaca_nemestrina
ENSEBUG00000016262	polr2c	100	77.455	ENSMLEG00000032412	POLR2C	100	77.455	Mandrillus_leucophaeus
ENSEBUG00000016262	polr2c	100	76.364	ENSMAMG00000013205	polr2c	100	76.364	Mastacembelus_armatus
ENSEBUG00000016262	polr2c	100	76.000	ENSMZEG00005015329	polr2c	100	76.000	Maylandia_zebra
ENSEBUG00000016262	polr2c	100	68.727	ENSMAUG00000000779	-	100	68.727	Mesocricetus_auratus
ENSEBUG00000016262	polr2c	97	64.179	ENSMAUG00000019031	-	100	64.179	Mesocricetus_auratus
ENSEBUG00000016262	polr2c	100	77.091	ENSMICG00000045178	POLR2C	100	77.091	Microcebus_murinus
ENSEBUG00000016262	polr2c	100	75.273	ENSMOCG00000013652	Polr2c	100	75.273	Microtus_ochrogaster
ENSEBUG00000016262	polr2c	100	76.000	ENSMMOG00000010560	polr2c	100	76.000	Mola_mola
ENSEBUG00000016262	polr2c	100	76.364	ENSMODG00000013540	POLR2C	100	76.364	Monodelphis_domestica
ENSEBUG00000016262	polr2c	100	76.364	ENSMALG00000004581	polr2c	100	76.364	Monopterus_albus
ENSEBUG00000016262	polr2c	56	32.680	MGP_CAROLIEiJ_G0021662	Polr1c	67	30.508	Mus_caroli
ENSEBUG00000016262	polr2c	100	77.455	MGP_CAROLIEiJ_G0031409	Polr2c	100	77.455	Mus_caroli
ENSEBUG00000016262	polr2c	55	32.237	ENSMUSG00000067148	Polr1c	67	30.579	Mus_musculus
ENSEBUG00000016262	polr2c	100	77.455	ENSMUSG00000031783	Polr2c	100	77.455	Mus_musculus
ENSEBUG00000016262	polr2c	55	32.026	MGP_PahariEiJ_G0020654	Polr1c	67	30.579	Mus_pahari
ENSEBUG00000016262	polr2c	100	77.455	MGP_PahariEiJ_G0023007	Polr2c	100	77.455	Mus_pahari
ENSEBUG00000016262	polr2c	55	32.680	MGP_SPRETEiJ_G0022574	Polr1c	67	30.579	Mus_spretus
ENSEBUG00000016262	polr2c	100	77.455	MGP_SPRETEiJ_G0032528	Polr2c	100	77.455	Mus_spretus
ENSEBUG00000016262	polr2c	100	77.818	ENSMPUG00000004483	POLR2C	100	77.818	Mustela_putorius_furo
ENSEBUG00000016262	polr2c	100	77.455	ENSMLUG00000015833	-	100	77.455	Myotis_lucifugus
ENSEBUG00000016262	polr2c	100	77.455	ENSMLUG00000025422	-	100	77.455	Myotis_lucifugus
ENSEBUG00000016262	polr2c	77	82.474	ENSMLUG00000023530	-	100	82.474	Myotis_lucifugus
ENSEBUG00000016262	polr2c	100	76.000	ENSMLUG00000029495	-	100	76.000	Myotis_lucifugus
ENSEBUG00000016262	polr2c	100	79.554	ENSNGAG00000012249	-	100	79.554	Nannospalax_galili
ENSEBUG00000016262	polr2c	100	58.736	ENSNGAG00000010540	-	100	58.736	Nannospalax_galili
ENSEBUG00000016262	polr2c	63	79.592	ENSNBRG00000003952	polr2c	94	79.592	Neolamprologus_brichardi
ENSEBUG00000016262	polr2c	100	69.597	ENSNLEG00000003034	POLR2C	100	69.597	Nomascus_leucogenys
ENSEBUG00000016262	polr2c	100	70.909	ENSMEUG00000014741	POLR2C	100	70.909	Notamacropus_eugenii
ENSEBUG00000016262	polr2c	56	30.323	ENSOPRG00000000145	POLR1C	56	30.323	Ochotona_princeps
ENSEBUG00000016262	polr2c	100	74.545	ENSOPRG00000006979	POLR2C	100	74.545	Ochotona_princeps
ENSEBUG00000016262	polr2c	100	77.818	ENSODEG00000016934	POLR2C	100	77.818	Octodon_degus
ENSEBUG00000016262	polr2c	100	76.000	ENSONIG00000010914	polr2c	100	76.000	Oreochromis_niloticus
ENSEBUG00000016262	polr2c	89	83.929	ENSOANG00000009337	POLR2C	97	83.929	Ornithorhynchus_anatinus
ENSEBUG00000016262	polr2c	100	77.455	ENSOCUG00000014984	POLR2C	100	77.455	Oryctolagus_cuniculus
ENSEBUG00000016262	polr2c	100	76.364	ENSORLG00000015108	polr2c	100	76.364	Oryzias_latipes
ENSEBUG00000016262	polr2c	100	76.364	ENSORLG00020013566	polr2c	100	76.364	Oryzias_latipes_hni
ENSEBUG00000016262	polr2c	100	76.364	ENSORLG00015003751	polr2c	100	76.364	Oryzias_latipes_hsok
ENSEBUG00000016262	polr2c	100	76.727	ENSOMEG00000019444	polr2c	100	76.727	Oryzias_melastigma
ENSEBUG00000016262	polr2c	99	40.876	ENSOGAG00000029610	-	100	40.876	Otolemur_garnettii
ENSEBUG00000016262	polr2c	100	76.727	ENSOGAG00000016866	POLR2C	100	76.727	Otolemur_garnettii
ENSEBUG00000016262	polr2c	100	77.818	ENSOARG00000000302	POLR2C	100	77.818	Ovis_aries
ENSEBUG00000016262	polr2c	100	78.022	ENSPPAG00000042822	POLR2C	100	78.022	Pan_paniscus
ENSEBUG00000016262	polr2c	100	77.818	ENSPPRG00000003215	POLR2C	100	77.818	Panthera_pardus
ENSEBUG00000016262	polr2c	89	85.268	ENSPTIG00000010297	POLR2C	81	85.268	Panthera_tigris_altaica
ENSEBUG00000016262	polr2c	100	78.022	ENSPTRG00000008157	POLR2C	100	78.022	Pan_troglodytes
ENSEBUG00000016262	polr2c	100	77.455	ENSPANG00000006264	POLR2C	100	77.455	Papio_anubis
ENSEBUG00000016262	polr2c	100	76.000	ENSPKIG00000005228	polr2c	100	76.000	Paramormyrops_kingsleyae
ENSEBUG00000016262	polr2c	89	84.375	ENSPSIG00000016112	POLR2C	82	84.375	Pelodiscus_sinensis
ENSEBUG00000016262	polr2c	72	72.683	ENSPMGG00000021249	polr2c	84	72.683	Periophthalmus_magnuspinnatus
ENSEBUG00000016262	polr2c	100	77.455	ENSPEMG00000014204	Polr2c	100	77.455	Peromyscus_maniculatus_bairdii
ENSEBUG00000016262	polr2c	81	79.386	ENSPMAG00000004827	polr2c	100	79.386	Petromyzon_marinus
ENSEBUG00000016262	polr2c	100	76.364	ENSPCIG00000015111	POLR2C	100	76.364	Phascolarctos_cinereus
ENSEBUG00000016262	polr2c	100	76.727	ENSPFOG00000024666	polr2c	100	76.727	Poecilia_formosa
ENSEBUG00000016262	polr2c	100	76.727	ENSPLAG00000019750	polr2c	100	76.727	Poecilia_latipinna
ENSEBUG00000016262	polr2c	100	76.727	ENSPMEG00000001741	polr2c	100	76.727	Poecilia_mexicana
ENSEBUG00000016262	polr2c	100	77.289	ENSPREG00000003090	polr2c	100	77.289	Poecilia_reticulata
ENSEBUG00000016262	polr2c	100	77.455	ENSPPYG00000007390	POLR2C	100	77.455	Pongo_abelii
ENSEBUG00000016262	polr2c	89	83.929	ENSPCAG00000002423	POLR2C	98	83.929	Procavia_capensis
ENSEBUG00000016262	polr2c	100	77.455	ENSPCOG00000017282	POLR2C	100	77.455	Propithecus_coquereli
ENSEBUG00000016262	polr2c	100	77.818	ENSPVAG00000001399	POLR2C	100	77.818	Pteropus_vampyrus
ENSEBUG00000016262	polr2c	100	76.000	ENSPNYG00000003756	polr2c	100	76.000	Pundamilia_nyererei
ENSEBUG00000016262	polr2c	100	77.455	ENSPNAG00000012133	polr2c	100	77.455	Pygocentrus_nattereri
ENSEBUG00000016262	polr2c	100	77.455	ENSRNOG00000015720	Polr2c	100	77.455	Rattus_norvegicus
ENSEBUG00000016262	polr2c	56	32.692	ENSRNOG00000019079	Polr1c	57	32.692	Rattus_norvegicus
ENSEBUG00000016262	polr2c	100	77.455	ENSRBIG00000026549	POLR2C	100	77.455	Rhinopithecus_bieti
ENSEBUG00000016262	polr2c	100	77.455	ENSRROG00000045745	POLR2C	100	77.455	Rhinopithecus_roxellana
ENSEBUG00000016262	polr2c	96	36.667	YIL021W	RPB3	83	36.667	Saccharomyces_cerevisiae
ENSEBUG00000016262	polr2c	100	77.455	ENSSBOG00000030004	POLR2C	100	77.455	Saimiri_boliviensis_boliviensis
ENSEBUG00000016262	polr2c	100	76.000	ENSSFOG00015023460	polr2c	100	76.000	Scleropages_formosus
ENSEBUG00000016262	polr2c	100	75.636	ENSSMAG00000002827	polr2c	81	75.636	Scophthalmus_maximus
ENSEBUG00000016262	polr2c	100	76.000	ENSSDUG00000003354	polr2c	100	76.000	Seriola_dumerili
ENSEBUG00000016262	polr2c	100	76.000	ENSSLDG00000003555	polr2c	100	76.000	Seriola_lalandi_dorsalis
ENSEBUG00000016262	polr2c	60	60.927	ENSSARG00000001565	-	97	60.927	Sorex_araneus
ENSEBUG00000016262	polr2c	100	75.636	ENSSPUG00000012934	POLR2C	100	75.636	Sphenodon_punctatus
ENSEBUG00000016262	polr2c	100	77.491	ENSSPAG00000005108	polr2c	100	77.491	Stegastes_partitus
ENSEBUG00000016262	polr2c	100	77.455	ENSSSCG00000025454	POLR2C	100	77.455	Sus_scrofa
ENSEBUG00000016262	polr2c	100	76.364	ENSTGUG00000004996	POLR2C	100	76.364	Taeniopygia_guttata
ENSEBUG00000016262	polr2c	100	74.909	ENSTRUG00000004676	polr2c	100	74.909	Takifugu_rubripes
ENSEBUG00000016262	polr2c	100	74.545	ENSTNIG00000008851	polr2c	100	74.545	Tetraodon_nigroviridis
ENSEBUG00000016262	polr2c	100	77.007	ENSTBEG00000009442	POLR2C	100	77.007	Tupaia_belangeri
ENSEBUG00000016262	polr2c	89	85.268	ENSTTRG00000010060	POLR2C	98	85.268	Tursiops_truncatus
ENSEBUG00000016262	polr2c	100	77.818	ENSUAMG00000014170	POLR2C	100	77.818	Ursus_americanus
ENSEBUG00000016262	polr2c	89	85.268	ENSUMAG00000021686	POLR2C	86	85.268	Ursus_maritimus
ENSEBUG00000016262	polr2c	71	79.888	ENSVPAG00000007590	POLR2C	97	79.888	Vicugna_pacos
ENSEBUG00000016262	polr2c	100	72.727	ENSVVUG00000023516	-	100	72.727	Vulpes_vulpes
ENSEBUG00000016262	polr2c	58	84.828	ENSVVUG00000003058	-	95	84.828	Vulpes_vulpes
ENSEBUG00000016262	polr2c	100	65.942	ENSXETG00000013784	polr2c	100	65.942	Xenopus_tropicalis
ENSEBUG00000016262	polr2c	100	76.727	ENSXCOG00000020734	polr2c	100	76.727	Xiphophorus_couchianus
ENSEBUG00000016262	polr2c	100	76.727	ENSXMAG00000015984	polr2c	100	76.727	Xiphophorus_maculatus