EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016387 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 57685 bases
Position: chrFYBX02009896.1:1054330-1112014
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026606	zf-C2H2	PF00096.26	2.3e-29	1	5
ENSEBUP00000026606	zf-C2H2	PF00096.26	2.3e-29	2	5
ENSEBUP00000026606	zf-C2H2	PF00096.26	2.3e-29	3	5
ENSEBUP00000026606	zf-C2H2	PF00096.26	2.3e-29	4	5
ENSEBUP00000026606	zf-C2H2	PF00096.26	2.3e-29	5	5
ENSEBUP00000026606	zf-met	PF12874.7	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027182	-	4304	-	ENSEBUP00000026606	403 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016387	-	58	41.709	ENSEBUG00000003459	-	92	41.709
ENSEBUG00000016387	-	81	55.422	ENSEBUG00000008025	-	99	55.422
ENSEBUG00000016387	-	77	39.487	ENSEBUG00000012543	-	91	39.487
ENSEBUG00000016387	-	67	41.089	ENSEBUG00000006233	-	76	41.026
ENSEBUG00000016387	-	82	41.791	ENSEBUG00000016292	-	95	41.791
ENSEBUG00000016387	-	50	36.139	ENSEBUG00000007931	-	61	36.139
ENSEBUG00000016387	-	81	43.636	ENSEBUG00000009484	-	84	43.636
ENSEBUG00000016387	-	81	53.191	ENSEBUG00000012704	-	99	53.191
ENSEBUG00000016387	-	84	50.893	ENSEBUG00000002032	-	99	51.190
ENSEBUG00000016387	-	65	32.616	ENSEBUG00000005854	-	92	33.948
ENSEBUG00000016387	-	80	79.193	ENSEBUG00000009317	-	97	79.193
ENSEBUG00000016387	-	81	40.995	ENSEBUG00000003128	-	95	46.809
ENSEBUG00000016387	-	51	43.541	ENSEBUG00000005264	-	77	43.541
ENSEBUG00000016387	-	81	50.000	ENSEBUG00000008185	-	99	50.000
ENSEBUG00000016387	-	82	44.344	ENSEBUG00000016362	-	99	46.354
ENSEBUG00000016387	-	81	50.610	ENSEBUG00000016496	-	89	51.829
ENSEBUG00000016387	-	81	41.033	ENSEBUG00000002586	-	86	41.033
ENSEBUG00000016387	-	51	39.070	ENSEBUG00000005816	-	69	45.926
ENSEBUG00000016387	-	55	39.394	ENSEBUG00000015159	-	90	39.394
ENSEBUG00000016387	-	70	42.322	ENSEBUG00000007266	-	100	42.322
ENSEBUG00000016387	-	55	49.275	ENSEBUG00000008903	-	63	49.275
ENSEBUG00000016387	-	81	50.279	ENSEBUG00000003555	-	100	48.603
ENSEBUG00000016387	-	83	41.317	ENSEBUG00000015993	-	86	41.916
ENSEBUG00000016387	-	74	50.000	ENSEBUG00000005310	ZNF226	99	50.000
ENSEBUG00000016387	-	82	51.541	ENSEBUG00000014667	-	100	54.103
ENSEBUG00000016387	-	77	42.614	ENSEBUG00000013874	-	95	42.614
ENSEBUG00000016387	-	53	50.000	ENSEBUG00000004597	-	73	50.000
ENSEBUG00000016387	-	54	40.816	ENSEBUG00000013213	-	90	40.816
ENSEBUG00000016387	-	59	38.333	ENSEBUG00000012053	-	85	38.333
ENSEBUG00000016387	-	80	35.784	ENSEBUG00000013126	-	98	35.784
ENSEBUG00000016387	-	90	44.059	ENSEBUG00000007518	-	97	45.067
ENSEBUG00000016387	-	53	53.237	ENSEBUG00000014730	-	60	53.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016387	-	50	49.180	ENSAPOG00000022086	-	95	49.573	Acanthochromis_polyacanthus
ENSEBUG00000016387	-	50	43.662	ENSAPOG00000024038	-	92	43.662	Acanthochromis_polyacanthus
ENSEBUG00000016387	-	51	46.552	ENSAPOG00000006282	-	76	46.552	Acanthochromis_polyacanthus
ENSEBUG00000016387	-	50	48.077	ENSAPOG00000020343	-	70	48.077	Acanthochromis_polyacanthus
ENSEBUG00000016387	-	56	47.143	ENSAPOG00000004878	-	96	47.143	Acanthochromis_polyacanthus
ENSEBUG00000016387	-	52	57.944	ENSACIG00000004666	-	60	48.810	Amphilophus_citrinellus
ENSEBUG00000016387	-	51	45.669	ENSAOCG00000000448	-	96	45.669	Amphiprion_ocellaris
ENSEBUG00000016387	-	50	52.174	ENSAOCG00000016088	-	75	52.174	Amphiprion_ocellaris
ENSEBUG00000016387	-	72	51.111	ENSAOCG00000016737	-	95	51.111	Amphiprion_ocellaris
ENSEBUG00000016387	-	50	46.809	ENSAPEG00000014848	-	99	46.809	Amphiprion_percula
ENSEBUG00000016387	-	57	36.245	ENSAPEG00000014415	-	89	36.245	Amphiprion_percula
ENSEBUG00000016387	-	52	47.794	ENSAPEG00000007389	-	96	40.299	Amphiprion_percula
ENSEBUG00000016387	-	55	40.964	ENSACLG00000024459	-	88	40.964	Astatotilapia_calliptera
ENSEBUG00000016387	-	58	40.000	ENSACLG00000017321	-	67	37.629	Astatotilapia_calliptera
ENSEBUG00000016387	-	52	36.199	ENSACLG00000027692	-	93	32.734	Astatotilapia_calliptera
ENSEBUG00000016387	-	58	45.536	ENSAMXG00000042167	-	96	45.536	Astyanax_mexicanus
ENSEBUG00000016387	-	56	40.426	ENSAMXG00000034333	-	87	45.918	Astyanax_mexicanus
ENSEBUG00000016387	-	52	42.667	ENSCHOG00000008899	-	100	42.667	Choloepus_hoffmanni
ENSEBUG00000016387	-	54	43.363	ENSFHEG00000011490	-	62	45.000	Fundulus_heteroclitus
ENSEBUG00000016387	-	75	39.698	ENSFHEG00000011028	-	62	45.205	Fundulus_heteroclitus
ENSEBUG00000016387	-	50	50.862	ENSHBUG00000006984	-	98	50.862	Haplochromis_burtoni
ENSEBUG00000016387	-	51	52.212	ENSHBUG00000015942	-	95	46.154	Haplochromis_burtoni
ENSEBUG00000016387	-	52	34.419	ENSIPUG00000012960	-	98	34.419	Ictalurus_punctatus
ENSEBUG00000016387	-	62	54.348	ENSKMAG00000016333	-	90	45.185	Kryptolebias_marmoratus
ENSEBUG00000016387	-	59	39.024	ENSKMAG00000009522	-	56	47.368	Kryptolebias_marmoratus
ENSEBUG00000016387	-	64	31.507	ENSLBEG00000001920	-	91	42.857	Labrus_bergylta
ENSEBUG00000016387	-	50	38.017	ENSMZEG00005027909	-	79	42.500	Maylandia_zebra
ENSEBUG00000016387	-	61	37.557	ENSMMOG00000000299	-	90	50.820	Mola_mola
ENSEBUG00000016387	-	51	48.819	ENSMALG00000020889	-	99	47.273	Monopterus_albus
ENSEBUG00000016387	-	54	50.435	ENSMALG00000008496	-	72	50.435	Monopterus_albus
ENSEBUG00000016387	-	52	46.400	ENSMALG00000019139	-	65	46.377	Monopterus_albus
ENSEBUG00000016387	-	50	46.835	ENSMALG00000012155	-	61	50.602	Monopterus_albus
ENSEBUG00000016387	-	57	47.619	ENSMALG00000003975	-	55	45.872	Monopterus_albus
ENSEBUG00000016387	-	53	54.386	ENSNBRG00000000960	-	96	46.094	Neolamprologus_brichardi
ENSEBUG00000016387	-	51	57.143	ENSONIG00000001458	-	98	57.143	Oreochromis_niloticus
ENSEBUG00000016387	-	51	48.315	ENSOMEG00000023102	-	79	48.315	Oryzias_melastigma
ENSEBUG00000016387	-	50	52.174	ENSPKIG00000012290	-	66	52.632	Paramormyrops_kingsleyae
ENSEBUG00000016387	-	51	47.788	ENSPFOG00000008638	-	51	47.788	Poecilia_formosa
ENSEBUG00000016387	-	61	46.565	ENSPFOG00000005592	-	53	41.912	Poecilia_formosa
ENSEBUG00000016387	-	61	50.000	ENSPMEG00000016966	-	94	50.000	Poecilia_mexicana
ENSEBUG00000016387	-	51	47.788	ENSPMEG00000000628	-	75	47.788	Poecilia_mexicana
ENSEBUG00000016387	-	55	41.414	ENSPREG00000009372	-	63	45.763	Poecilia_reticulata
ENSEBUG00000016387	-	52	43.382	ENSPREG00000004306	-	94	54.167	Poecilia_reticulata
ENSEBUG00000016387	-	60	47.059	ENSPNYG00000002873	-	87	35.593	Pundamilia_nyererei
ENSEBUG00000016387	-	55	40.964	ENSPNYG00000019241	-	88	40.964	Pundamilia_nyererei
ENSEBUG00000016387	-	59	40.611	ENSSDUG00000000786	-	91	53.947	Seriola_dumerili
ENSEBUG00000016387	-	51	46.667	ENSSDUG00000006426	-	83	46.667	Seriola_dumerili
ENSEBUG00000016387	-	51	44.118	ENSSPAG00000019245	-	83	44.118	Stegastes_partitus
ENSEBUG00000016387	-	50	40.376	ENSTRUG00000007022	-	59	40.376	Takifugu_rubripes
ENSEBUG00000016387	-	57	50.000	ENSTRUG00000005180	-	89	50.000	Takifugu_rubripes
ENSEBUG00000016387	-	51	41.818	ENSTRUG00000020582	-	60	41.818	Takifugu_rubripes
ENSEBUG00000016387	-	55	44.444	ENSXMAG00000020022	-	82	44.444	Xiphophorus_maculatus
ENSEBUG00000016387	-	53	42.647	ENSXMAG00000021436	-	55	42.647	Xiphophorus_maculatus