EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016435 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 66921 bases
Position: chrFYBX02009497.1:292921-359841
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	1	6
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	2	6
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	3	6
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	4	6
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	5	6
ENSEBUP00000026690	zf-C2H2	PF00096.26	2.8e-29	6	6
ENSEBUP00000026690	zf-met	PF12874.7	0.00019	1	2
ENSEBUP00000026690	zf-met	PF12874.7	0.00019	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027266	-	4022	-	ENSEBUP00000026690	727 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016435	e4f1	68	40.000	ENSEBUG00000005186	-	88	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016435	e4f1	82	36.582	ENSCSEG00000015852	e4f1	70	37.148	Cynoglossus_semilaevis
ENSEBUG00000016435	e4f1	90	62.766	ENSGMOG00000011409	e4f1	76	46.316	Gadus_morhua
ENSEBUG00000016435	e4f1	62	60.825	ENSGACG00000011808	e4f1	69	40.106	Gasterosteus_aculeatus
ENSEBUG00000016435	e4f1	81	32.736	ENSHCOG00000016455	e4f1	62	49.324	Hippocampus_comes
ENSEBUG00000016435	e4f1	50	48.746	ENSIPUG00000005379	e4f1	72	39.894	Ictalurus_punctatus
ENSEBUG00000016435	e4f1	59	60.417	ENSMMOG00000007612	e4f1	86	36.086	Mola_mola
ENSEBUG00000016435	e4f1	91	38.022	ENSMALG00000007314	e4f1	59	57.522	Monopterus_albus
ENSEBUG00000016435	e4f1	55	59.434	ENSORLG00020017974	e4f1	72	40.034	Oryzias_latipes_hni
ENSEBUG00000016435	e4f1	58	59.434	ENSORLG00015007385	e4f1	71	39.487	Oryzias_latipes_hsok
ENSEBUG00000016435	e4f1	76	42.162	ENSPKIG00000001942	e4f1	67	37.500	Paramormyrops_kingsleyae
ENSEBUG00000016435	e4f1	55	54.867	ENSPMGG00000020527	e4f1	73	54.386	Periophthalmus_magnuspinnatus
ENSEBUG00000016435	e4f1	76	47.126	ENSSFOG00015021291	e4f1	69	48.519	Scleropages_formosus
ENSEBUG00000016435	e4f1	79	37.815	ENSSPUG00000011420	E4F1	66	38.676	Sphenodon_punctatus
ENSEBUG00000016435	e4f1	54	61.290	ENSXETG00000016091	e4f1	82	61.290	Xenopus_tropicalis