EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSEBUG00000016475 (Gene tree)
Gene ID
-
Gene Symbol
hbp1
Alias
wu:fj62c10|zgc:112297
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
201735 bases
Position
chrFYBX02009763.1:3488981-3690715
Accession
ZDB-GENE-050522-414
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000026759AXHPF08517.121.1e-2211
ENSEBUP00000026751AXHPF08517.121.3e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000027335-2796-ENSEBUP00000026759555 (aa)--
ENSEBUT00000027327-2023-ENSEBUP00000026751588 (aa)--
Gene Model
Click here to download ENSEBUG00000016475's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016475's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000016475hbp18345.691ENSG00000105856HBP19857.895Homo_sapiens
ENSEBUG00000016475hbp18444.842ENSAPOG00000015816hbp19845.094Acanthochromis_polyacanthus
ENSEBUG00000016475hbp18346.076ENSAMEG00000013492HBP19245.800Ailuropoda_melanoleuca
ENSEBUG00000016475hbp18444.770ENSACIG00000018873hbp19144.351Amphilophus_citrinellus
ENSEBUG00000016475hbp18446.555ENSACIG00000019093-9345.175Amphilophus_citrinellus
ENSEBUG00000016475hbp18443.002ENSAOCG00000001429-9043.086Amphiprion_ocellaris
ENSEBUG00000016475hbp18444.842ENSAOCG00000010889hbp19845.094Amphiprion_ocellaris
ENSEBUG00000016475hbp18443.030ENSAPEG00000022589-9042.285Amphiprion_percula
ENSEBUG00000016475hbp18444.842ENSAPEG00000002330hbp19845.094Amphiprion_percula
ENSEBUG00000016475hbp18444.676ENSATEG00000016411hbp19844.025Anabas_testudineus
ENSEBUG00000016475hbp18443.326ENSATEG00000003902-9642.570Anabas_testudineus
ENSEBUG00000016475hbp18346.076ENSAPLG00000007110HBP19344.334Anas_platyrhynchos
ENSEBUG00000016475hbp18346.386ENSACAG00000015023HBP19245.418Anolis_carolinensis
ENSEBUG00000016475hbp18345.691ENSANAG00000022302HBP18356.846Aotus_nancymaae
ENSEBUG00000016475hbp18444.842ENSACLG00000004758hbp19444.654Astatotilapia_calliptera
ENSEBUG00000016475hbp18445.455ENSACLG00000003606HBP19144.467Astatotilapia_calliptera
ENSEBUG00000016475hbp18446.444ENSAMXG00000017678hbp19146.458Astyanax_mexicanus
ENSEBUG00000016475hbp18346.000ENSBTAG00000005524HBP19145.892Bos_taurus
ENSEBUG00000016475hbp18345.892ENSCJAG00000016260HBP18357.741Callithrix_jacchus
ENSEBUG00000016475hbp18346.169ENSCAFG00000003939HBP19146.092Canis_familiaris
ENSEBUG00000016475hbp18346.169ENSCAFG00020023119HBP19146.092Canis_lupus_dingo
ENSEBUG00000016475hbp18346.000ENSCHIG00000024405HBP19345.892Capra_hircus
ENSEBUG00000016475hbp18345.509ENSTSYG00000010057HBP19345.491Carlito_syrichta
ENSEBUG00000016475hbp18445.984ENSCAPG00000017460HBP19245.291Cavia_aperea
ENSEBUG00000016475hbp18346.076ENSCPOG00000002375HBP19145.491Cavia_porcellus
ENSEBUG00000016475hbp18345.691ENSCCAG00000026359HBP18356.846Cebus_capucinus
ENSEBUG00000016475hbp18345.491ENSCATG00000021910HBP19345.309Cercocebus_atys
ENSEBUG00000016475hbp18345.691ENSCLAG00000005170HBP19345.509Chinchilla_lanigera
ENSEBUG00000016475hbp18345.491ENSCSAG00000011395HBP19145.309Chlorocebus_sabaeus
ENSEBUG00000016475hbp18345.766ENSCPBG00000000954HBP19145.110Chrysemys_picta_bellii
ENSEBUG00000016475hbp18345.491ENSCANG00000022804HBP19345.309Colobus_angolensis_palliatus
ENSEBUG00000016475hbp18445.691ENSCGRG00001014437Hbp19145.709Cricetulus_griseus_chok1gshd
ENSEBUG00000016475hbp18445.691ENSCGRG00000013859Hbp19145.709Cricetulus_griseus_crigri
ENSEBUG00000016475hbp18445.094ENSCSEG00000003373hbp19843.443Cynoglossus_semilaevis
ENSEBUG00000016475hbp18444.906ENSCVAG00000008501-9144.906Cyprinodon_variegatus
ENSEBUG00000016475hbp18445.684ENSCVAG00000008930hbp19843.763Cyprinodon_variegatus
ENSEBUG00000016475hbp18446.138ENSDARG00000028517hbp19346.138Danio_rerio
ENSEBUG00000016475hbp18346.386ENSDNOG00000004405HBP19542.553Dasypus_novemcinctus
ENSEBUG00000016475hbp15940.525ENSDORG00000010576Hbp18740.525Dipodomys_ordii
ENSEBUG00000016475hbp18341.036ENSETEG00000018542HBP19341.071Echinops_telfairi
ENSEBUG00000016475hbp18345.674ENSEASG00005017469HBP19442.553Equus_asinus_asinus
ENSEBUG00000016475hbp18345.674ENSECAG00000020969HBP19245.509Equus_caballus
ENSEBUG00000016475hbp18444.958ENSELUG00000006967hbp19745.397Esox_lucius
ENSEBUG00000016475hbp18444.515ENSELUG00000017031-8544.093Esox_lucius
ENSEBUG00000016475hbp18346.076ENSFCAG00000005858HBP18545.691Felis_catus
ENSEBUG00000016475hbp18345.272ENSFALG00000010259HBP19143.539Ficedula_albicollis
ENSEBUG00000016475hbp18844.000ENSFDAG00000007897HBP19943.659Fukomys_damarensis
ENSEBUG00000016475hbp18343.035ENSFHEG00000014389-9042.412Fundulus_heteroclitus
ENSEBUG00000016475hbp18444.842ENSFHEG00000008222hbp19843.943Fundulus_heteroclitus
ENSEBUG00000016475hbp18444.748ENSGMOG00000013782hbp19844.050Gadus_morhua
ENSEBUG00000016475hbp18346.278ENSGALG00000008050HBP19144.732Gallus_gallus
ENSEBUG00000016475hbp18442.975ENSGAFG00000004651-9042.769Gambusia_affinis
ENSEBUG00000016475hbp18444.632ENSGAFG00000021976hbp19843.585Gambusia_affinis
ENSEBUG00000016475hbp18444.842ENSGACG00000010054hbp19844.654Gasterosteus_aculeatus
ENSEBUG00000016475hbp18344.398ENSGACG00000019192-9343.983Gasterosteus_aculeatus
ENSEBUG00000016475hbp18345.783ENSGAGG00000023042HBP19144.444Gopherus_agassizii
ENSEBUG00000016475hbp18445.600ENSGGOG00000007788HBP18357.083Gorilla_gorilla
ENSEBUG00000016475hbp18445.808ENSHBUG00000016198-9144.511Haplochromis_burtoni
ENSEBUG00000016475hbp18444.842ENSHBUG00000004967hbp19444.654Haplochromis_burtoni
ENSEBUG00000016475hbp18345.200ENSHGLG00000019188HBP19145.691Heterocephalus_glaber_female
ENSEBUG00000016475hbp18345.200ENSHGLG00100001912HBP19145.691Heterocephalus_glaber_male
ENSEBUG00000016475hbp18434.504ENSHGLG00100014672-9232.996Heterocephalus_glaber_male
ENSEBUG00000016475hbp16945.960ENSHCOG00000010740-7745.685Hippocampus_comes
ENSEBUG00000016475hbp18445.203ENSHCOG00000011877hbp19843.983Hippocampus_comes
ENSEBUG00000016475hbp18446.138ENSIPUG00000023044hbp19246.362Ictalurus_punctatus
ENSEBUG00000016475hbp18346.386ENSSTOG00000013846HBP19146.200Ictidomys_tridecemlineatus
ENSEBUG00000016475hbp18345.892ENSJJAG00000015341Hbp19145.709Jaculus_jaculus
ENSEBUG00000016475hbp18443.841ENSKMAG00000000266-9343.451Kryptolebias_marmoratus
ENSEBUG00000016475hbp18445.053ENSKMAG00000003132hbp19844.142Kryptolebias_marmoratus
ENSEBUG00000016475hbp18446.105ENSLBEG00000012078hbp19844.398Labrus_bergylta
ENSEBUG00000016475hbp18441.463ENSLBEG00000023959-9341.036Labrus_bergylta
ENSEBUG00000016475hbp18444.821ENSLACG00000009119HBP19145.418Latimeria_chalumnae
ENSEBUG00000016475hbp18346.436ENSLOCG00000015822hbp19046.076Lepisosteus_oculatus
ENSEBUG00000016475hbp18344.600ENSLAFG00000005317HBP19344.422Loxodonta_africana
ENSEBUG00000016475hbp18345.491ENSMFAG00000030375HBP18357.983Macaca_fascicularis
ENSEBUG00000016475hbp18445.618ENSMMUG00000015409HBP19245.418Macaca_mulatta
ENSEBUG00000016475hbp18344.008ENSMNEG00000037516HBP19244.215Macaca_nemestrina
ENSEBUG00000016475hbp18345.491ENSMLEG00000031993HBP19345.309Mandrillus_leucophaeus
ENSEBUG00000016475hbp18442.418ENSMAMG00000023588-8941.968Mastacembelus_armatus
ENSEBUG00000016475hbp18345.877ENSMAMG00000023227hbp19843.416Mastacembelus_armatus
ENSEBUG00000016475hbp18445.455ENSMZEG00005015065HBP19144.467Maylandia_zebra
ENSEBUG00000016475hbp18444.958ENSMZEG00005005999hbp17844.748Maylandia_zebra
ENSEBUG00000016475hbp18346.293ENSMGAG00000006880HBP19146.047Meleagris_gallopavo
ENSEBUG00000016475hbp18346.185ENSMAUG00000011449Hbp19145.582Mesocricetus_auratus
ENSEBUG00000016475hbp18345.691ENSMICG00000012858HBP18457.500Microcebus_murinus
ENSEBUG00000016475hbp18344.980ENSMOCG00000019227Hbp19344.531Microtus_ochrogaster
ENSEBUG00000016475hbp18444.561ENSMMOG00000012207hbp19342.355Mola_mola
ENSEBUG00000016475hbp18445.621ENSMMOG00000010239-9944.024Mola_mola
ENSEBUG00000016475hbp18842.210ENSMODG00000016376HBP19241.918Monodelphis_domestica
ENSEBUG00000016475hbp18640.000ENSMALG00000010834-9539.351Monopterus_albus
ENSEBUG00000016475hbp18445.474ENSMALG00000009884hbp19843.210Monopterus_albus
ENSEBUG00000016475hbp18345.418MGP_CAROLIEiJ_G0017683Hbp19145.726Mus_caroli
ENSEBUG00000016475hbp18345.418ENSMUSG00000002996Hbp19145.726Mus_musculus
ENSEBUG00000016475hbp18345.400MGP_PahariEiJ_G0029441Hbp19146.016Mus_pahari
ENSEBUG00000016475hbp18345.418MGP_SPRETEiJ_G0018525Hbp19145.726Mus_spretus
ENSEBUG00000016475hbp18346.185ENSMPUG00000018249HBP19146.000Mustela_putorius_furo
ENSEBUG00000016475hbp18842.805ENSMLUG00000012425HBP19145.892Myotis_lucifugus
ENSEBUG00000016475hbp18345.582ENSNGAG00000023485Hbp19145.309Nannospalax_galili
ENSEBUG00000016475hbp18444.842ENSNBRG00000001405hbp19444.654Neolamprologus_brichardi
ENSEBUG00000016475hbp18445.902ENSNBRG00000017820-9144.711Neolamprologus_brichardi
ENSEBUG00000016475hbp18345.691ENSNLEG00000008761HBP18357.083Nomascus_leucogenys
ENSEBUG00000016475hbp17541.203ENSMEUG00000011116HBP18340.312Notamacropus_eugenii
ENSEBUG00000016475hbp15978.723ENSOPRG00000005315HBP16278.723Ochotona_princeps
ENSEBUG00000016475hbp18334.447ENSODEG00000010517-9135.062Octodon_degus
ENSEBUG00000016475hbp18345.491ENSODEG00000001327-9145.309Octodon_degus
ENSEBUG00000016475hbp18340.126ENSODEG00000000482-9339.712Octodon_degus
ENSEBUG00000016475hbp18445.053ENSONIG00000008523hbp19844.864Oreochromis_niloticus
ENSEBUG00000016475hbp18442.629ENSONIG00000011868-9443.137Oreochromis_niloticus
ENSEBUG00000016475hbp18346.356ENSOANG00000003174HBP19345.253Ornithorhynchus_anatinus
ENSEBUG00000016475hbp18345.674ENSOCUG00000012758HBP19345.984Oryctolagus_cuniculus
ENSEBUG00000016475hbp18444.353ENSORLG00000009474-9144.148Oryzias_latipes
ENSEBUG00000016475hbp18444.000ENSORLG00000004396hbp19844.235Oryzias_latipes
ENSEBUG00000016475hbp18444.148ENSORLG00020004269-9143.943Oryzias_latipes_hni
ENSEBUG00000016475hbp18742.915ENSORLG00020000370hbp19844.468Oryzias_latipes_hni
ENSEBUG00000016475hbp18443.671ENSORLG00015006557hbp19844.025Oryzias_latipes_hsok
ENSEBUG00000016475hbp18443.789ENSOMEG00000012837hbp19843.750Oryzias_melastigma
ENSEBUG00000016475hbp18444.650ENSOMEG00000013045-8944.033Oryzias_melastigma
ENSEBUG00000016475hbp18345.382ENSOGAG00000013102HBP19345.509Otolemur_garnettii
ENSEBUG00000016475hbp18345.800ENSOARG00000005055HBP19145.691Ovis_aries
ENSEBUG00000016475hbp18345.691ENSPPAG00000042116HBP18357.083Pan_paniscus
ENSEBUG00000016475hbp18346.076ENSPPRG00000007240HBP19345.691Panthera_pardus
ENSEBUG00000016475hbp18344.668ENSPTIG00000002734HBP19344.289Panthera_tigris_altaica
ENSEBUG00000016475hbp18345.691ENSPTRG00000019575HBP18357.083Pan_troglodytes
ENSEBUG00000016475hbp18345.491ENSPANG00000024385HBP18357.983Papio_anubis
ENSEBUG00000016475hbp18443.460ENSPKIG00000016269HBP19243.187Paramormyrops_kingsleyae
ENSEBUG00000016475hbp18446.488ENSPKIG00000016967hbp19346.392Paramormyrops_kingsleyae
ENSEBUG00000016475hbp18345.565ENSPSIG00000012478HBP18643.825Pelodiscus_sinensis
ENSEBUG00000016475hbp18444.906ENSPMGG00000005789hbp19444.792Periophthalmus_magnuspinnatus
ENSEBUG00000016475hbp18440.882ENSPMGG00000008031-9340.000Periophthalmus_magnuspinnatus
ENSEBUG00000016475hbp18345.800ENSPEMG00000014801Hbp19145.618Peromyscus_maniculatus_bairdii
ENSEBUG00000016475hbp18452.110ENSPMAG00000002631hbp19251.688Petromyzon_marinus
ENSEBUG00000016475hbp18842.210ENSPCIG00000004275HBP19241.918Phascolarctos_cinereus
ENSEBUG00000016475hbp18444.842ENSPFOG00000003951hbp19843.788Poecilia_formosa
ENSEBUG00000016475hbp18443.505ENSPFOG00000012271-8742.742Poecilia_formosa
ENSEBUG00000016475hbp18444.842ENSPLAG00000003142hbp19843.788Poecilia_latipinna
ENSEBUG00000016475hbp18443.648ENSPLAG00000012669-9843.058Poecilia_latipinna
ENSEBUG00000016475hbp18444.842ENSPMEG00000003800hbp19843.788Poecilia_mexicana
ENSEBUG00000016475hbp18443.621ENSPMEG00000015095-9042.540Poecilia_mexicana
ENSEBUG00000016475hbp18444.842ENSPREG00000004000hbp19843.788Poecilia_reticulata
ENSEBUG00000016475hbp15151.916ENSPREG00000015242-8451.916Poecilia_reticulata
ENSEBUG00000016475hbp18345.382ENSPPYG00000017898HBP19145.509Pongo_abelii
ENSEBUG00000016475hbp18346.263ENSPCAG00000014060HBP19346.371Procavia_capensis
ENSEBUG00000016475hbp16648.111ENSPCOG00000015370HBP19047.870Propithecus_coquereli
ENSEBUG00000016475hbp18345.253ENSPVAG00000014543HBP19345.491Pteropus_vampyrus
ENSEBUG00000016475hbp18445.492ENSPNYG00000015063HBP19144.511Pundamilia_nyererei
ENSEBUG00000016475hbp18444.958ENSPNYG00000001079hbp19444.654Pundamilia_nyererei
ENSEBUG00000016475hbp18345.493ENSPNAG00000029977hbp19145.511Pygocentrus_nattereri
ENSEBUG00000016475hbp18345.491ENSRNOG00000008927Hbp19145.618Rattus_norvegicus
ENSEBUG00000016475hbp16057.200ENSRBIG00000042410HBP17556.800Rhinopithecus_bieti
ENSEBUG00000016475hbp18345.090ENSRROG00000036622HBP18357.983Rhinopithecus_roxellana
ENSEBUG00000016475hbp18345.892ENSSBOG00000023603HBP18257.741Saimiri_boliviensis_boliviensis
ENSEBUG00000016475hbp18842.238ENSSHAG00000010948HBP19942.210Sarcophilus_harrisii
ENSEBUG00000016475hbp18446.830ENSSFOG00015011155hbp19346.735Scleropages_formosus
ENSEBUG00000016475hbp18643.227ENSSMAG00000012631-8643.763Scophthalmus_maximus
ENSEBUG00000016475hbp18445.168ENSSMAG00000009892hbp19845.833Scophthalmus_maximus
ENSEBUG00000016475hbp18445.625ENSSDUG00000022273hbp19844.864Seriola_dumerili
ENSEBUG00000016475hbp18443.750ENSSDUG00000015387-8943.548Seriola_dumerili
ENSEBUG00000016475hbp18443.776ENSSLDG00000017324-9844.398Seriola_lalandi_dorsalis
ENSEBUG00000016475hbp18445.511ENSSLDG00000009669hbp19844.864Seriola_lalandi_dorsalis
ENSEBUG00000016475hbp17542.857ENSSARG00000007731HBP19342.411Sorex_araneus
ENSEBUG00000016475hbp18346.061ENSSPUG00000019157HBP18844.821Sphenodon_punctatus
ENSEBUG00000016475hbp18444.536ENSSPAG00000009193-9044.764Stegastes_partitus
ENSEBUG00000016475hbp18444.864ENSSPAG00000004739hbp19845.094Stegastes_partitus
ENSEBUG00000016475hbp18346.185ENSSSCG00000035673HBP19346.000Sus_scrofa
ENSEBUG00000016475hbp18445.582ENSTGUG00000003100HBP19344.752Taeniopygia_guttata
ENSEBUG00000016475hbp18444.770ENSTRUG00000016990hbp19843.648Takifugu_rubripes
ENSEBUG00000016475hbp18540.120ENSTRUG00000011881-8239.563Takifugu_rubripes
ENSEBUG00000016475hbp18940.481ENSTNIG00000002023-9840.410Tetraodon_nigroviridis
ENSEBUG00000016475hbp18444.191ENSTNIG00000016027hbp19743.149Tetraodon_nigroviridis
ENSEBUG00000016475hbp18336.948ENSTBEG00000007793HBP19337.177Tupaia_belangeri
ENSEBUG00000016475hbp18346.169ENSTTRG00000006826HBP19345.491Tursiops_truncatus
ENSEBUG00000016475hbp18346.076ENSUAMG00000005951HBP19145.892Ursus_americanus
ENSEBUG00000016475hbp18346.169ENSUMAG00000018257HBP19146.185Ursus_maritimus
ENSEBUG00000016475hbp16642.965ENSVPAG00000008629HBP19642.750Vicugna_pacos
ENSEBUG00000016475hbp18346.169ENSVVUG00000022009HBP19146.092Vulpes_vulpes
ENSEBUG00000016475hbp18346.169ENSXETG00000005922hbp19342.125Xenopus_tropicalis
ENSEBUG00000016475hbp18444.351ENSXCOG00000020795hbp19143.408Xiphophorus_couchianus
ENSEBUG00000016475hbp18442.505ENSXMAG00000007586-9042.424Xiphophorus_maculatus
ENSEBUG00000016475hbp18544.215ENSXMAG00000016455hbp19843.788Xiphophorus_maculatus

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