EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016496 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 77854 bases
Position: chrFYBX02009896.1:816761-894614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026794	zf-C2H2	PF00096.26	1.7e-14	1	2
ENSEBUP00000026794	zf-C2H2	PF00096.26	1.7e-14	2	2
ENSEBUP00000026798	zf-C2H2	PF00096.26	5.4e-14	1	2
ENSEBUP00000026798	zf-C2H2	PF00096.26	5.4e-14	2	2
ENSEBUP00000026798	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027370	-	2679	-	ENSEBUP00000026794	539 (aa)	-	-
ENSEBUT00000027374	-	2060	-	ENSEBUP00000026798	387 (aa)	-	-
ENSEBUT00000027377	-	3928	-	ENSEBUP00000026801	477 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016496	-	95	44.595	ENSEBUG00000003128	-	98	41.176
ENSEBUG00000016496	-	96	41.525	ENSEBUG00000009484	-	89	41.525
ENSEBUG00000016496	-	88	54.321	ENSEBUG00000009317	-	96	52.469
ENSEBUG00000016496	-	97	43.417	ENSEBUG00000014667	-	100	45.104
ENSEBUG00000016496	-	84	42.708	ENSEBUG00000007266	-	96	42.014
ENSEBUG00000016496	-	94	39.628	ENSEBUG00000002586	-	85	39.628
ENSEBUG00000016496	-	65	37.449	ENSEBUG00000003842	-	98	32.622
ENSEBUG00000016496	-	91	43.590	ENSEBUG00000016362	-	99	44.589
ENSEBUG00000016496	-	96	46.914	ENSEBUG00000003555	-	100	46.914
ENSEBUG00000016496	-	88	48.352	ENSEBUG00000008185	-	97	48.370
ENSEBUG00000016496	-	96	44.949	ENSEBUG00000002032	-	98	44.172
ENSEBUG00000016496	-	97	47.826	ENSEBUG00000008025	-	100	47.826
ENSEBUG00000016496	-	71	41.538	ENSEBUG00000016090	-	89	37.500
ENSEBUG00000016496	-	94	44.377	ENSEBUG00000012704	-	99	44.377
ENSEBUG00000016496	-	91	43.548	ENSEBUG00000007518	-	97	43.548
ENSEBUG00000016496	-	89	51.829	ENSEBUG00000016387	-	81	50.610
ENSEBUG00000016496	-	90	35.952	ENSEBUG00000015993	-	89	36.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016496	-	50	42.857	ENSPMGG00000001558	znf1174	60	42.857	Periophthalmus_magnuspinnatus