EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016502 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 39343 bases
Position: chrFYBX02000016.1:71030-110372
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000026813	PRP4	PF08799.11	4.4e-11	1	1
ENSEBUP00000026804	PRP4	PF08799.11	4.8e-11	1	1
ENSEBUP00000026813	Prp18	PF02840.15	8.9e-62	1	1
ENSEBUP00000026804	Prp18	PF02840.15	4.3e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027380	-	5680	-	ENSEBUP00000026804	354 (aa)	-	-
ENSEBUT00000027388	-	4160	-	ENSEBUP00000026813	349 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016502	prpf18	99	65.706	ENSG00000165630	PRPF18	100	66.571	Homo_sapiens
ENSEBUG00000016502	prpf18	99	68.588	ENSAPOG00000024177	prpf18	100	69.452	Acanthochromis_polyacanthus
ENSEBUG00000016502	prpf18	99	65.994	ENSAMEG00000013591	-	100	66.859	Ailuropoda_melanoleuca
ENSEBUG00000016502	prpf18	99	70.029	ENSACIG00000001186	prpf18	100	70.893	Amphilophus_citrinellus
ENSEBUG00000016502	prpf18	97	68.235	ENSAOCG00000006572	prpf18	94	68.713	Amphiprion_ocellaris
ENSEBUG00000016502	prpf18	99	68.588	ENSAPEG00000004564	prpf18	100	69.452	Amphiprion_percula
ENSEBUG00000016502	prpf18	99	68.300	ENSATEG00000000303	prpf18	100	69.164	Anabas_testudineus
ENSEBUG00000016502	prpf18	98	66.570	ENSAPLG00000003387	-	99	67.733	Anas_platyrhynchos
ENSEBUG00000016502	prpf18	99	66.763	ENSACAG00000000818	-	100	67.435	Anolis_carolinensis
ENSEBUG00000016502	prpf18	99	65.706	ENSANAG00000037445	-	100	66.571	Aotus_nancymaae
ENSEBUG00000016502	prpf18	99	69.741	ENSACLG00000026296	prpf18	100	70.605	Astatotilapia_calliptera
ENSEBUG00000016502	prpf18	99	69.429	ENSAMXG00000012848	prpf18	100	70.286	Astyanax_mexicanus
ENSEBUG00000016502	prpf18	99	66.092	ENSBTAG00000017244	PRPF18	100	66.954	Bos_taurus
ENSEBUG00000016502	prpf18	97	37.391	WBGene00009320	F32B6.3	97	37.391	Caenorhabditis_elegans
ENSEBUG00000016502	prpf18	99	65.706	ENSCJAG00000009432	-	100	66.571	Callithrix_jacchus
ENSEBUG00000016502	prpf18	99	65.994	ENSCAFG00000004735	-	100	66.859	Canis_familiaris
ENSEBUG00000016502	prpf18	99	65.994	ENSCAFG00020007712	-	100	66.859	Canis_lupus_dingo
ENSEBUG00000016502	prpf18	99	66.092	ENSCHIG00000000499	-	100	66.954	Capra_hircus
ENSEBUG00000016502	prpf18	99	65.706	ENSTSYG00000003517	-	100	66.571	Carlito_syrichta
ENSEBUG00000016502	prpf18	99	65.706	ENSCPOG00000021069	-	100	66.571	Cavia_porcellus
ENSEBUG00000016502	prpf18	99	65.706	ENSCCAG00000036822	-	100	66.571	Cebus_capucinus
ENSEBUG00000016502	prpf18	99	56.196	ENSCATG00000016633	-	100	57.061	Cercocebus_atys
ENSEBUG00000016502	prpf18	99	65.706	ENSCLAG00000011770	-	100	66.571	Chinchilla_lanigera
ENSEBUG00000016502	prpf18	99	64.672	ENSCSAG00000013109	-	100	65.527	Chlorocebus_sabaeus
ENSEBUG00000016502	prpf18	99	64.444	ENSCPBG00000003100	-	100	65.651	Chrysemys_picta_bellii
ENSEBUG00000016502	prpf18	99	53.736	ENSCING00000020481	-	99	53.736	Ciona_intestinalis
ENSEBUG00000016502	prpf18	98	53.276	ENSCSAVG00000010546	-	98	53.276	Ciona_savignyi
ENSEBUG00000016502	prpf18	99	65.706	ENSCANG00000034900	-	100	66.571	Colobus_angolensis_palliatus
ENSEBUG00000016502	prpf18	99	65.706	ENSCGRG00001023665	Prpf18	100	66.571	Cricetulus_griseus_chok1gshd
ENSEBUG00000016502	prpf18	99	65.706	ENSCGRG00000014690	Prpf18	100	66.571	Cricetulus_griseus_crigri
ENSEBUG00000016502	prpf18	99	68.012	ENSCSEG00000005536	prpf18	99	68.012	Cynoglossus_semilaevis
ENSEBUG00000016502	prpf18	99	68.876	ENSCVAG00000012401	prpf18	100	69.741	Cyprinodon_variegatus
ENSEBUG00000016502	prpf18	99	67.919	ENSDARG00000058306	prpf18	100	68.876	Danio_rerio
ENSEBUG00000016502	prpf18	99	65.994	ENSDNOG00000035607	-	100	66.859	Dasypus_novemcinctus
ENSEBUG00000016502	prpf18	99	65.418	ENSDORG00000000858	Prpf18	100	66.282	Dipodomys_ordii
ENSEBUG00000016502	prpf18	98	48.688	FBgn0027784	Prp18	98	48.688	Drosophila_melanogaster
ENSEBUG00000016502	prpf18	99	58.501	ENSETEG00000015060	-	100	59.078	Echinops_telfairi
ENSEBUG00000016502	prpf18	99	65.994	ENSEASG00005019373	-	100	66.859	Equus_asinus_asinus
ENSEBUG00000016502	prpf18	99	65.994	ENSECAG00000006997	PRPF18	100	66.859	Equus_caballus
ENSEBUG00000016502	prpf18	92	42.056	ENSEEUG00000001171	-	100	42.056	Erinaceus_europaeus
ENSEBUG00000016502	prpf18	99	68.481	ENSELUG00000022190	prpf18	100	68.481	Esox_lucius
ENSEBUG00000016502	prpf18	99	65.994	ENSFCAG00000004436	-	100	66.859	Felis_catus
ENSEBUG00000016502	prpf18	92	64.615	ENSFALG00000001912	-	98	65.031	Ficedula_albicollis
ENSEBUG00000016502	prpf18	99	44.669	ENSFDAG00000010713	-	97	44.669	Fukomys_damarensis
ENSEBUG00000016502	prpf18	93	66.975	ENSFDAG00000014026	-	99	67.901	Fukomys_damarensis
ENSEBUG00000016502	prpf18	77	74.906	ENSFHEG00000020125	prpf18	98	74.906	Fundulus_heteroclitus
ENSEBUG00000016502	prpf18	99	67.341	ENSGMOG00000012210	prpf18	99	67.341	Gadus_morhua
ENSEBUG00000016502	prpf18	99	66.282	ENSGALG00000043593	-	100	67.435	Gallus_gallus
ENSEBUG00000016502	prpf18	99	68.208	ENSGAFG00000006034	prpf18	100	69.164	Gambusia_affinis
ENSEBUG00000016502	prpf18	99	65.994	ENSGACG00000012232	prpf18	100	65.994	Gasterosteus_aculeatus
ENSEBUG00000016502	prpf18	99	67.630	ENSGAGG00000016878	-	100	68.012	Gopherus_agassizii
ENSEBUG00000016502	prpf18	92	64.174	ENSGGOG00000025188	-	97	65.217	Gorilla_gorilla
ENSEBUG00000016502	prpf18	99	69.741	ENSHBUG00000010264	prpf18	100	70.605	Haplochromis_burtoni
ENSEBUG00000016502	prpf18	99	65.706	ENSHGLG00000018534	PRPF18	100	66.571	Heterocephalus_glaber_female
ENSEBUG00000016502	prpf18	93	66.975	ENSHGLG00100012161	-	98	67.901	Heterocephalus_glaber_male
ENSEBUG00000016502	prpf18	99	68.208	ENSHCOG00000015987	prpf18	100	69.164	Hippocampus_comes
ENSEBUG00000016502	prpf18	99	66.006	ENSIPUG00000007432	prpf18	100	66.572	Ictalurus_punctatus
ENSEBUG00000016502	prpf18	99	66.282	ENSSTOG00000008735	-	100	67.147	Ictidomys_tridecemlineatus
ENSEBUG00000016502	prpf18	99	65.706	ENSJJAG00000024041	-	100	66.571	Jaculus_jaculus
ENSEBUG00000016502	prpf18	99	47.443	ENSJJAG00000015191	-	100	48.159	Jaculus_jaculus
ENSEBUG00000016502	prpf18	99	67.435	ENSKMAG00000012124	prpf18	100	68.300	Kryptolebias_marmoratus
ENSEBUG00000016502	prpf18	97	64.912	ENSLBEG00000028466	prpf18	99	65.789	Labrus_bergylta
ENSEBUG00000016502	prpf18	99	66.763	ENSLACG00000009885	prpf18	100	68.012	Latimeria_chalumnae
ENSEBUG00000016502	prpf18	99	68.876	ENSLOCG00000016736	prpf18	100	69.741	Lepisosteus_oculatus
ENSEBUG00000016502	prpf18	99	65.706	ENSLAFG00000007753	-	100	66.571	Loxodonta_africana
ENSEBUG00000016502	prpf18	99	65.706	ENSMFAG00000000540	-	100	66.571	Macaca_fascicularis
ENSEBUG00000016502	prpf18	99	65.706	ENSMMUG00000015071	PRPF18	93	79.470	Macaca_mulatta
ENSEBUG00000016502	prpf18	99	65.706	ENSMNEG00000024679	-	100	66.571	Macaca_nemestrina
ENSEBUG00000016502	prpf18	99	51.009	ENSMLEG00000031715	-	100	51.873	Mandrillus_leucophaeus
ENSEBUG00000016502	prpf18	99	69.164	ENSMAMG00000006610	prpf18	100	70.029	Mastacembelus_armatus
ENSEBUG00000016502	prpf18	99	69.741	ENSMZEG00005019392	prpf18	100	70.605	Maylandia_zebra
ENSEBUG00000016502	prpf18	99	66.282	ENSMGAG00000005023	-	100	67.435	Meleagris_gallopavo
ENSEBUG00000016502	prpf18	99	65.418	ENSMICG00000006572	-	100	66.282	Microcebus_murinus
ENSEBUG00000016502	prpf18	99	65.706	ENSMOCG00000021468	Prpf18	100	66.571	Microtus_ochrogaster
ENSEBUG00000016502	prpf18	99	68.012	ENSMMOG00000013012	prpf18	100	68.876	Mola_mola
ENSEBUG00000016502	prpf18	99	64.265	ENSMODG00000024043	-	100	64.265	Monodelphis_domestica
ENSEBUG00000016502	prpf18	98	61.254	ENSMODG00000016902	-	95	62.069	Monodelphis_domestica
ENSEBUG00000016502	prpf18	99	63.533	ENSMALG00000005486	prpf18	100	65.242	Monopterus_albus
ENSEBUG00000016502	prpf18	99	65.706	MGP_CAROLIEiJ_G0023143	Prpf18	100	78.082	Mus_caroli
ENSEBUG00000016502	prpf18	99	65.706	ENSMUSG00000039449	Prpf18	100	78.082	Mus_musculus
ENSEBUG00000016502	prpf18	99	65.706	MGP_PahariEiJ_G0019203	Prpf18	100	78.082	Mus_pahari
ENSEBUG00000016502	prpf18	99	65.706	MGP_SPRETEiJ_G0024061	Prpf18	100	78.082	Mus_spretus
ENSEBUG00000016502	prpf18	99	65.706	ENSMPUG00000000938	-	100	66.571	Mustela_putorius_furo
ENSEBUG00000016502	prpf18	99	65.994	ENSMLUG00000009200	-	100	66.859	Myotis_lucifugus
ENSEBUG00000016502	prpf18	99	65.994	ENSNGAG00000012500	-	100	66.859	Nannospalax_galili
ENSEBUG00000016502	prpf18	66	66.379	ENSNGAG00000023550	-	83	66.379	Nannospalax_galili
ENSEBUG00000016502	prpf18	99	69.741	ENSNBRG00000001778	prpf18	100	70.605	Neolamprologus_brichardi
ENSEBUG00000016502	prpf18	99	65.706	ENSNLEG00000012186	-	100	66.571	Nomascus_leucogenys
ENSEBUG00000016502	prpf18	74	59.846	ENSMEUG00000005032	-	75	59.846	Notamacropus_eugenii
ENSEBUG00000016502	prpf18	77	45.185	ENSOPRG00000002153	-	100	46.296	Ochotona_princeps
ENSEBUG00000016502	prpf18	99	65.418	ENSODEG00000003770	-	100	66.282	Octodon_degus
ENSEBUG00000016502	prpf18	97	69.412	ENSONIG00000014854	prpf18	96	70.294	Oreochromis_niloticus
ENSEBUG00000016502	prpf18	99	65.812	ENSOANG00000015404	-	100	66.667	Ornithorhynchus_anatinus
ENSEBUG00000016502	prpf18	99	65.706	ENSOCUG00000027756	-	96	66.867	Oryctolagus_cuniculus
ENSEBUG00000016502	prpf18	99	68.857	ENSORLG00000010293	prpf18	100	69.714	Oryzias_latipes
ENSEBUG00000016502	prpf18	99	69.653	ENSORLG00020001530	prpf18	100	70.605	Oryzias_latipes_hni
ENSEBUG00000016502	prpf18	99	69.653	ENSORLG00015013705	prpf18	100	70.605	Oryzias_latipes_hsok
ENSEBUG00000016502	prpf18	99	69.942	ENSOMEG00000009167	prpf18	100	70.893	Oryzias_melastigma
ENSEBUG00000016502	prpf18	99	64.841	ENSOGAG00000007294	-	100	65.706	Otolemur_garnettii
ENSEBUG00000016502	prpf18	99	64.957	ENSOARG00000006243	-	100	65.812	Ovis_aries
ENSEBUG00000016502	prpf18	99	65.706	ENSPPAG00000041959	-	100	66.571	Pan_paniscus
ENSEBUG00000016502	prpf18	99	65.994	ENSPPRG00000000107	-	100	66.859	Panthera_pardus
ENSEBUG00000016502	prpf18	99	66.282	ENSPTIG00000021094	-	100	67.147	Panthera_tigris_altaica
ENSEBUG00000016502	prpf18	99	65.706	ENSPTRG00000002306	PRPF18	100	66.571	Pan_troglodytes
ENSEBUG00000016502	prpf18	99	65.706	ENSPANG00000023346	-	100	66.571	Papio_anubis
ENSEBUG00000016502	prpf18	85	96.226	ENSPKIG00000014128	prpf18	70	96.296	Paramormyrops_kingsleyae
ENSEBUG00000016502	prpf18	99	66.571	ENSPSIG00000016064	-	100	67.435	Pelodiscus_sinensis
ENSEBUG00000016502	prpf18	99	65.230	ENSPMGG00000016486	prpf18	100	65.805	Periophthalmus_magnuspinnatus
ENSEBUG00000016502	prpf18	99	65.706	ENSPEMG00000013704	Prpf18	100	66.571	Peromyscus_maniculatus_bairdii
ENSEBUG00000016502	prpf18	99	68.786	ENSPMAG00000000204	prpf18	100	68.786	Petromyzon_marinus
ENSEBUG00000016502	prpf18	92	64.798	ENSPCIG00000012963	-	99	65.839	Phascolarctos_cinereus
ENSEBUG00000016502	prpf18	99	67.429	ENSPFOG00000017611	prpf18	100	68.286	Poecilia_formosa
ENSEBUG00000016502	prpf18	99	68.300	ENSPLAG00000000369	prpf18	100	69.164	Poecilia_latipinna
ENSEBUG00000016502	prpf18	99	68.588	ENSPMEG00000005183	prpf18	100	69.452	Poecilia_mexicana
ENSEBUG00000016502	prpf18	99	68.208	ENSPREG00000015232	prpf18	100	69.164	Poecilia_reticulata
ENSEBUG00000016502	prpf18	99	65.418	ENSPPYG00000002101	PRPF18	100	66.282	Pongo_abelii
ENSEBUG00000016502	prpf18	99	51.297	ENSPCAG00000010833	-	100	52.161	Procavia_capensis
ENSEBUG00000016502	prpf18	99	63.006	ENSPCOG00000013057	-	100	63.401	Propithecus_coquereli
ENSEBUG00000016502	prpf18	99	38.218	ENSPVAG00000002947	-	100	39.080	Pteropus_vampyrus
ENSEBUG00000016502	prpf18	99	69.452	ENSPNYG00000003554	prpf18	100	70.317	Pundamilia_nyererei
ENSEBUG00000016502	prpf18	99	68.091	ENSPNAG00000023151	prpf18	100	68.946	Pygocentrus_nattereri
ENSEBUG00000016502	prpf18	99	65.706	ENSRNOG00000018396	Prpf18	100	66.571	Rattus_norvegicus
ENSEBUG00000016502	prpf18	99	65.418	ENSRBIG00000028028	-	100	66.282	Rhinopithecus_bieti
ENSEBUG00000016502	prpf18	99	65.706	ENSRROG00000040695	-	100	66.571	Rhinopithecus_roxellana
ENSEBUG00000016502	prpf18	99	65.706	ENSSBOG00000034482	-	100	66.571	Saimiri_boliviensis_boliviensis
ENSEBUG00000016502	prpf18	99	65.994	ENSSHAG00000016463	-	100	66.859	Sarcophilus_harrisii
ENSEBUG00000016502	prpf18	99	58.074	ENSSHAG00000009669	-	100	58.074	Sarcophilus_harrisii
ENSEBUG00000016502	prpf18	98	68.588	ENSSFOG00015022118	prpf18	100	65.341	Scleropages_formosus
ENSEBUG00000016502	prpf18	67	45.957	ENSSFOG00015021154	-	90	45.957	Scleropages_formosus
ENSEBUG00000016502	prpf18	99	68.876	ENSSMAG00000005308	prpf18	100	68.876	Scophthalmus_maximus
ENSEBUG00000016502	prpf18	99	68.876	ENSSDUG00000015428	prpf18	100	69.741	Seriola_dumerili
ENSEBUG00000016502	prpf18	99	68.588	ENSSLDG00000023989	prpf18	100	69.452	Seriola_lalandi_dorsalis
ENSEBUG00000016502	prpf18	99	42.775	ENSSARG00000005307	-	100	43.228	Sorex_araneus
ENSEBUG00000016502	prpf18	99	66.571	ENSSPUG00000002619	-	100	67.147	Sphenodon_punctatus
ENSEBUG00000016502	prpf18	99	68.876	ENSSPAG00000019502	prpf18	100	69.741	Stegastes_partitus
ENSEBUG00000016502	prpf18	99	65.994	ENSSSCG00000026354	-	100	66.859	Sus_scrofa
ENSEBUG00000016502	prpf18	99	66.859	ENSTGUG00000002286	-	100	67.435	Taeniopygia_guttata
ENSEBUG00000016502	prpf18	99	68.012	ENSTRUG00000011278	prpf18	100	68.876	Takifugu_rubripes
ENSEBUG00000016502	prpf18	99	68.012	ENSTNIG00000000911	prpf18	100	68.876	Tetraodon_nigroviridis
ENSEBUG00000016502	prpf18	79	93.590	ENSTBEG00000013011	-	79	93.590	Tupaia_belangeri
ENSEBUG00000016502	prpf18	99	65.896	ENSTTRG00000011117	PRPF18	100	66.859	Tursiops_truncatus
ENSEBUG00000016502	prpf18	90	67.722	ENSUAMG00000001815	-	93	68.671	Ursus_americanus
ENSEBUG00000016502	prpf18	99	63.977	ENSUMAG00000012329	-	100	64.841	Ursus_maritimus
ENSEBUG00000016502	prpf18	99	61.095	ENSVPAG00000011486	-	100	61.960	Vicugna_pacos
ENSEBUG00000016502	prpf18	99	65.994	ENSVVUG00000005453	-	100	66.859	Vulpes_vulpes
ENSEBUG00000016502	prpf18	99	64.857	ENSXETG00000024057	prpf18	100	64.857	Xenopus_tropicalis
ENSEBUG00000016502	prpf18	99	67.622	ENSXCOG00000020414	prpf18	100	68.481	Xiphophorus_couchianus
ENSEBUG00000016502	prpf18	99	68.588	ENSXMAG00000004713	prpf18	91	69.452	Xiphophorus_maculatus