EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016621 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:109921
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 3719 bases
Position: chrFYBX02010303.1:3934745-3938463
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027040	RTC	PF01137.21	4.9e-52	1	1
ENSEBUP00000027040	RTC_insert	PF05189.13	7.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027616	-	1116	-	ENSEBUP00000027040	371 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016621	-	100	53.600	ENSG00000120158	RCL1	100	53.600	Homo_sapiens
ENSEBUG00000016621	-	99	55.496	ENSAPOG00000015666	rcl1	100	55.496	Acanthochromis_polyacanthus
ENSEBUG00000016621	-	70	30.038	ENSAMEG00000008855	RTCA	94	30.038	Ailuropoda_melanoleuca
ENSEBUG00000016621	-	100	54.667	ENSAMEG00000002631	RCL1	100	54.667	Ailuropoda_melanoleuca
ENSEBUG00000016621	-	99	55.764	ENSACIG00000021195	rcl1	100	55.764	Amphilophus_citrinellus
ENSEBUG00000016621	-	99	55.496	ENSAOCG00000002223	rcl1	100	55.496	Amphiprion_ocellaris
ENSEBUG00000016621	-	99	55.496	ENSAPEG00000006905	rcl1	100	55.496	Amphiprion_percula
ENSEBUG00000016621	-	99	55.496	ENSATEG00000020026	rcl1	100	55.496	Anabas_testudineus
ENSEBUG00000016621	-	88	53.030	ENSAPLG00000006031	RCL1	100	53.030	Anas_platyrhynchos
ENSEBUG00000016621	-	98	52.174	ENSACAG00000003640	RCL1	98	52.174	Anolis_carolinensis
ENSEBUG00000016621	-	100	53.867	ENSANAG00000037372	RCL1	100	53.867	Aotus_nancymaae
ENSEBUG00000016621	-	99	55.496	ENSACLG00000021724	rcl1	100	55.496	Astatotilapia_calliptera
ENSEBUG00000016621	-	98	54.620	ENSAMXG00000033394	rcl1	99	54.620	Astyanax_mexicanus
ENSEBUG00000016621	-	99	43.122	WBGene00022852	ZK1127.5	99	43.122	Caenorhabditis_elegans
ENSEBUG00000016621	-	100	53.867	ENSCJAG00000011202	RCL1	100	53.867	Callithrix_jacchus
ENSEBUG00000016621	-	100	54.667	ENSCAFG00000002091	RCL1	100	54.667	Canis_familiaris
ENSEBUG00000016621	-	100	54.667	ENSCAFG00020000638	RCL1	78	54.667	Canis_lupus_dingo
ENSEBUG00000016621	-	100	54.400	ENSCHIG00000012407	RCL1	98	55.163	Capra_hircus
ENSEBUG00000016621	-	87	54.573	ENSTSYG00000009592	RCL1	97	52.459	Carlito_syrichta
ENSEBUG00000016621	-	66	50.932	ENSCAPG00000013575	RCL1	99	50.932	Cavia_aperea
ENSEBUG00000016621	-	100	53.333	ENSCPOG00000015354	RCL1	100	53.333	Cavia_porcellus
ENSEBUG00000016621	-	100	53.333	ENSCCAG00000033505	RCL1	100	53.333	Cebus_capucinus
ENSEBUG00000016621	-	100	53.600	ENSCATG00000034721	RCL1	100	53.600	Cercocebus_atys
ENSEBUG00000016621	-	100	53.067	ENSCLAG00000007445	RCL1	100	53.067	Chinchilla_lanigera
ENSEBUG00000016621	-	100	53.600	ENSCSAG00000008811	RCL1	100	53.600	Chlorocebus_sabaeus
ENSEBUG00000016621	-	86	49.226	ENSCHOG00000007216	RCL1	100	49.226	Choloepus_hoffmanni
ENSEBUG00000016621	-	98	54.891	ENSCPBG00000025481	RCL1	94	54.848	Chrysemys_picta_bellii
ENSEBUG00000016621	-	99	47.861	ENSCING00000019565	-	99	47.861	Ciona_intestinalis
ENSEBUG00000016621	-	100	53.600	ENSCANG00000027099	RCL1	100	53.600	Colobus_angolensis_palliatus
ENSEBUG00000016621	-	100	54.400	ENSCGRG00001013748	Rcl1	100	54.400	Cricetulus_griseus_chok1gshd
ENSEBUG00000016621	-	88	54.848	ENSCGRG00000005843	Rcl1	99	54.848	Cricetulus_griseus_crigri
ENSEBUG00000016621	-	99	56.032	ENSCSEG00000000712	rcl1	98	56.032	Cynoglossus_semilaevis
ENSEBUG00000016621	-	99	55.496	ENSCVAG00000011536	rcl1	100	55.496	Cyprinodon_variegatus
ENSEBUG00000016621	-	98	52.989	ENSDARG00000038312	rcl1	100	52.989	Danio_rerio
ENSEBUG00000016621	-	71	51.128	ENSDNOG00000019911	RCL1	99	52.093	Dasypus_novemcinctus
ENSEBUG00000016621	-	98	55.435	ENSDORG00000015645	Rcl1	98	55.435	Dipodomys_ordii
ENSEBUG00000016621	-	99	50.000	FBgn0020909	Rtc1	99	50.000	Drosophila_melanogaster
ENSEBUG00000016621	-	65	42.510	ENSETEG00000014087	-	75	42.510	Echinops_telfairi
ENSEBUG00000016621	-	100	53.867	ENSEASG00005010653	RCL1	100	53.867	Equus_asinus_asinus
ENSEBUG00000016621	-	100	53.600	ENSECAG00000015973	RCL1	100	53.600	Equus_caballus
ENSEBUG00000016621	-	98	48.370	ENSEEUG00000009801	RCL1	98	48.370	Erinaceus_europaeus
ENSEBUG00000016621	-	99	52.957	ENSELUG00000007353	rcl1	100	52.957	Esox_lucius
ENSEBUG00000016621	-	100	55.200	ENSFCAG00000014557	RCL1	100	55.200	Felis_catus
ENSEBUG00000016621	-	96	51.934	ENSFALG00000010553	RCL1	94	51.934	Ficedula_albicollis
ENSEBUG00000016621	-	87	53.963	ENSFDAG00000004209	RCL1	99	53.963	Fukomys_damarensis
ENSEBUG00000016621	-	99	55.764	ENSFHEG00000011228	rcl1	100	55.764	Fundulus_heteroclitus
ENSEBUG00000016621	-	50	32.447	ENSFHEG00000002868	rtca	78	32.447	Fundulus_heteroclitus
ENSEBUG00000016621	-	99	54.865	ENSGMOG00000004677	rcl1	99	54.865	Gadus_morhua
ENSEBUG00000016621	-	98	53.533	ENSGALG00000015024	RCL1	98	53.533	Gallus_gallus
ENSEBUG00000016621	-	99	55.496	ENSGAFG00000007257	rcl1	100	55.496	Gambusia_affinis
ENSEBUG00000016621	-	99	56.568	ENSGACG00000017474	rcl1	100	56.568	Gasterosteus_aculeatus
ENSEBUG00000016621	-	100	53.333	ENSGAGG00000003689	RCL1	100	53.333	Gopherus_agassizii
ENSEBUG00000016621	-	100	53.600	ENSGGOG00000015041	RCL1	100	53.600	Gorilla_gorilla
ENSEBUG00000016621	-	99	55.228	ENSHBUG00000001393	rcl1	100	55.228	Haplochromis_burtoni
ENSEBUG00000016621	-	100	53.600	ENSHGLG00000016452	RCL1	100	53.600	Heterocephalus_glaber_female
ENSEBUG00000016621	-	98	47.684	ENSHGLG00000005368	-	98	47.684	Heterocephalus_glaber_female
ENSEBUG00000016621	-	98	48.774	ENSHGLG00100018010	-	98	48.774	Heterocephalus_glaber_male
ENSEBUG00000016621	-	100	49.867	ENSHGLG00100008718	-	100	49.867	Heterocephalus_glaber_male
ENSEBUG00000016621	-	99	54.155	ENSHCOG00000020170	rcl1	100	54.155	Hippocampus_comes
ENSEBUG00000016621	-	98	53.804	ENSIPUG00000018054	RCL1	99	53.804	Ictalurus_punctatus
ENSEBUG00000016621	-	100	53.600	ENSSTOG00000000023	RCL1	100	53.600	Ictidomys_tridecemlineatus
ENSEBUG00000016621	-	99	50.136	ENSJJAG00000015632	-	99	50.136	Jaculus_jaculus
ENSEBUG00000016621	-	53	37.811	ENSJJAG00000000764	-	97	37.811	Jaculus_jaculus
ENSEBUG00000016621	-	98	55.163	ENSJJAG00000022803	-	98	55.163	Jaculus_jaculus
ENSEBUG00000016621	-	98	56.640	ENSKMAG00000011946	rcl1	99	56.640	Kryptolebias_marmoratus
ENSEBUG00000016621	-	99	52.279	ENSLBEG00000003957	rcl1	100	52.279	Labrus_bergylta
ENSEBUG00000016621	-	89	52.252	ENSLACG00000004594	RCL1	100	53.727	Latimeria_chalumnae
ENSEBUG00000016621	-	99	53.619	ENSLOCG00000010148	rcl1	98	53.619	Lepisosteus_oculatus
ENSEBUG00000016621	-	98	54.891	ENSLAFG00000017495	RCL1	98	54.891	Loxodonta_africana
ENSEBUG00000016621	-	100	53.600	ENSMFAG00000037906	RCL1	100	53.600	Macaca_fascicularis
ENSEBUG00000016621	-	100	53.600	ENSMNEG00000012288	RCL1	100	53.600	Macaca_nemestrina
ENSEBUG00000016621	-	100	53.600	ENSMLEG00000043088	RCL1	100	53.600	Mandrillus_leucophaeus
ENSEBUG00000016621	-	99	55.764	ENSMAMG00000008311	rcl1	100	55.764	Mastacembelus_armatus
ENSEBUG00000016621	-	99	55.496	ENSMZEG00005017292	rcl1	100	55.496	Maylandia_zebra
ENSEBUG00000016621	-	57	50.685	ENSMGAG00000002245	RCL1	99	50.685	Meleagris_gallopavo
ENSEBUG00000016621	-	57	53.488	ENSMAUG00000008922	Rcl1	99	53.488	Mesocricetus_auratus
ENSEBUG00000016621	-	100	52.800	ENSMICG00000015562	RCL1	100	52.800	Microcebus_murinus
ENSEBUG00000016621	-	100	54.133	ENSMOCG00000012145	Rcl1	100	54.133	Microtus_ochrogaster
ENSEBUG00000016621	-	99	56.150	ENSMMOG00000021264	rcl1	100	56.150	Mola_mola
ENSEBUG00000016621	-	95	52.113	ENSMODG00000015377	RCL1	94	52.113	Monodelphis_domestica
ENSEBUG00000016621	-	99	55.764	ENSMALG00000018618	rcl1	100	55.764	Monopterus_albus
ENSEBUG00000016621	-	100	54.400	MGP_CAROLIEiJ_G0022853	Rcl1	100	54.400	Mus_caroli
ENSEBUG00000016621	-	100	54.133	ENSMUSG00000024785	Rcl1	100	54.133	Mus_musculus
ENSEBUG00000016621	-	100	54.667	MGP_PahariEiJ_G0014346	Rcl1	100	54.667	Mus_pahari
ENSEBUG00000016621	-	100	53.867	MGP_SPRETEiJ_G0023771	Rcl1	100	53.867	Mus_spretus
ENSEBUG00000016621	-	98	55.707	ENSMPUG00000004998	RCL1	98	55.707	Mustela_putorius_furo
ENSEBUG00000016621	-	100	53.333	ENSMLUG00000009654	RCL1	100	53.333	Myotis_lucifugus
ENSEBUG00000016621	-	100	54.133	ENSNGAG00000015327	Rcl1	98	54.891	Nannospalax_galili
ENSEBUG00000016621	-	92	54.070	ENSNBRG00000019854	rcl1	93	54.360	Neolamprologus_brichardi
ENSEBUG00000016621	-	100	53.067	ENSNLEG00000008891	RCL1	100	53.067	Nomascus_leucogenys
ENSEBUG00000016621	-	100	47.467	ENSMEUG00000007653	RCL1	100	47.467	Notamacropus_eugenii
ENSEBUG00000016621	-	100	55.200	ENSOPRG00000010965	RCL1	100	55.200	Ochotona_princeps
ENSEBUG00000016621	-	88	47.130	ENSODEG00000004151	RCL1	96	47.130	Octodon_degus
ENSEBUG00000016621	-	99	55.764	ENSONIG00000003871	rcl1	100	55.764	Oreochromis_niloticus
ENSEBUG00000016621	-	66	49.802	ENSOANG00000013193	-	99	49.802	Ornithorhynchus_anatinus
ENSEBUG00000016621	-	100	53.600	ENSOCUG00000008161	RCL1	100	53.600	Oryctolagus_cuniculus
ENSEBUG00000016621	-	83	30.032	ENSORLG00000013605	rtca	89	30.032	Oryzias_latipes
ENSEBUG00000016621	-	99	54.155	ENSORLG00000010443	rcl1	100	54.155	Oryzias_latipes
ENSEBUG00000016621	-	99	54.692	ENSORLG00020012211	rcl1	100	54.692	Oryzias_latipes_hni
ENSEBUG00000016621	-	83	30.032	ENSORLG00020001904	rtca	86	30.032	Oryzias_latipes_hni
ENSEBUG00000016621	-	83	30.032	ENSORLG00015021064	rtca	83	30.032	Oryzias_latipes_hsok
ENSEBUG00000016621	-	99	54.155	ENSORLG00015001122	rcl1	100	54.155	Oryzias_latipes_hsok
ENSEBUG00000016621	-	99	54.960	ENSOMEG00000022976	rcl1	88	54.960	Oryzias_melastigma
ENSEBUG00000016621	-	98	54.348	ENSOGAG00000007480	RCL1	98	54.348	Otolemur_garnettii
ENSEBUG00000016621	-	100	54.667	ENSOARG00000013463	RCL1	98	55.435	Ovis_aries
ENSEBUG00000016621	-	100	53.600	ENSPPAG00000037958	RCL1	100	53.600	Pan_paniscus
ENSEBUG00000016621	-	100	55.200	ENSPPRG00000022645	RCL1	100	55.200	Panthera_pardus
ENSEBUG00000016621	-	87	56.098	ENSPTIG00000019031	RCL1	99	54.419	Panthera_tigris_altaica
ENSEBUG00000016621	-	100	53.600	ENSPTRG00000020743	RCL1	100	53.600	Pan_troglodytes
ENSEBUG00000016621	-	100	53.600	ENSPANG00000025151	RCL1	100	53.600	Papio_anubis
ENSEBUG00000016621	-	99	55.764	ENSPKIG00000021022	rcl1	100	55.764	Paramormyrops_kingsleyae
ENSEBUG00000016621	-	88	53.636	ENSPSIG00000012302	RCL1	100	53.636	Pelodiscus_sinensis
ENSEBUG00000016621	-	99	54.155	ENSPMGG00000024007	rcl1	100	54.155	Periophthalmus_magnuspinnatus
ENSEBUG00000016621	-	100	54.400	ENSPEMG00000023275	Rcl1	100	54.400	Peromyscus_maniculatus_bairdii
ENSEBUG00000016621	-	100	52.000	ENSPCIG00000000188	RCL1	100	52.000	Phascolarctos_cinereus
ENSEBUG00000016621	-	99	54.960	ENSPFOG00000019682	rcl1	99	54.960	Poecilia_formosa
ENSEBUG00000016621	-	99	54.960	ENSPLAG00000022354	rcl1	100	54.960	Poecilia_latipinna
ENSEBUG00000016621	-	99	54.960	ENSPMEG00000008131	rcl1	100	54.960	Poecilia_mexicana
ENSEBUG00000016621	-	99	54.692	ENSPREG00000008032	rcl1	100	54.692	Poecilia_reticulata
ENSEBUG00000016621	-	100	53.867	ENSPPYG00000019244	RCL1	100	53.867	Pongo_abelii
ENSEBUG00000016621	-	100	50.933	ENSPCAG00000001440	RCL1	100	50.933	Procavia_capensis
ENSEBUG00000016621	-	98	54.348	ENSPCOG00000009611	RCL1	98	54.348	Propithecus_coquereli
ENSEBUG00000016621	-	100	54.933	ENSPVAG00000015752	RCL1	100	54.933	Pteropus_vampyrus
ENSEBUG00000016621	-	99	55.228	ENSPNYG00000012910	rcl1	100	55.228	Pundamilia_nyererei
ENSEBUG00000016621	-	98	54.918	ENSPNAG00000028307	rcl1	90	54.918	Pygocentrus_nattereri
ENSEBUG00000016621	-	100	54.133	ENSRNOG00000015491	Rcl1	100	54.133	Rattus_norvegicus
ENSEBUG00000016621	-	100	53.333	ENSRBIG00000035818	RCL1	100	53.333	Rhinopithecus_bieti
ENSEBUG00000016621	-	100	53.600	ENSRROG00000029781	RCL1	100	53.600	Rhinopithecus_roxellana
ENSEBUG00000016621	-	99	33.957	YOL010W	-	99	33.957	Saccharomyces_cerevisiae
ENSEBUG00000016621	-	100	53.600	ENSSBOG00000026369	RCL1	100	53.600	Saimiri_boliviensis_boliviensis
ENSEBUG00000016621	-	88	51.506	ENSSHAG00000014086	RCL1	100	51.506	Sarcophilus_harrisii
ENSEBUG00000016621	-	99	54.960	ENSSFOG00015023020	rcl1	100	54.960	Scleropages_formosus
ENSEBUG00000016621	-	99	54.692	ENSSMAG00000019751	rcl1	86	54.692	Scophthalmus_maximus
ENSEBUG00000016621	-	99	55.228	ENSSDUG00000006349	rcl1	100	55.228	Seriola_dumerili
ENSEBUG00000016621	-	99	54.960	ENSSLDG00000022076	rcl1	100	54.960	Seriola_lalandi_dorsalis
ENSEBUG00000016621	-	100	54.667	ENSSARG00000009260	RCL1	100	54.667	Sorex_araneus
ENSEBUG00000016621	-	98	53.261	ENSSPUG00000016330	RCL1	98	53.261	Sphenodon_punctatus
ENSEBUG00000016621	-	99	55.228	ENSSPAG00000018038	rcl1	100	55.228	Stegastes_partitus
ENSEBUG00000016621	-	100	53.600	ENSSSCG00000005217	RCL1	83	53.600	Sus_scrofa
ENSEBUG00000016621	-	98	53.514	ENSTGUG00000005138	RCL1	98	53.514	Taeniopygia_guttata
ENSEBUG00000016621	-	99	55.228	ENSTRUG00000010493	rcl1	100	54.960	Takifugu_rubripes
ENSEBUG00000016621	-	99	54.424	ENSTNIG00000013214	rcl1	99	54.424	Tetraodon_nigroviridis
ENSEBUG00000016621	-	100	51.733	ENSTBEG00000016339	RCL1	100	51.733	Tupaia_belangeri
ENSEBUG00000016621	-	100	53.867	ENSTTRG00000016525	RCL1	100	53.867	Tursiops_truncatus
ENSEBUG00000016621	-	100	54.667	ENSUAMG00000005598	RCL1	100	56.790	Ursus_americanus
ENSEBUG00000016621	-	87	55.488	ENSUMAG00000017890	RCL1	97	55.488	Ursus_maritimus
ENSEBUG00000016621	-	87	54.878	ENSVPAG00000009188	RCL1	99	54.878	Vicugna_pacos
ENSEBUG00000016621	-	91	55.000	ENSVVUG00000007304	RCL1	90	55.000	Vulpes_vulpes
ENSEBUG00000016621	-	98	50.949	ENSXETG00000000592	rcl1	98	50.949	Xenopus_tropicalis
ENSEBUG00000016621	-	99	54.960	ENSXCOG00000004922	rcl1	100	54.960	Xiphophorus_couchianus
ENSEBUG00000016621	-	99	54.960	ENSXMAG00000022366	RCL1	100	54.960	Xiphophorus_maculatus