EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fb37a01|fc62e03|fe05c04|wu:fb37a01|wu:fc62e03|wu:fe05c04|zgc:77910
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 69911 bases
Position: chrFYBX02000151.1:1271310-1341220
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027325	RRM_1	PF00076.22	2.7e-10	1	1
ENSEBUP00000027317	RRM_1	PF00076.22	3.7e-10	1	1
ENSEBUP00000027313	RRM_1	PF00076.22	3.9e-10	1	1
ENSEBUP00000027332	RRM_1	PF00076.22	5.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027889	-	6659	-	ENSEBUP00000027313	436 (aa)	-	-
ENSEBUT00000027901	-	6256	-	ENSEBUP00000027325	342 (aa)	-	-
ENSEBUT00000027908	-	6465	-	ENSEBUP00000027332	536 (aa)	-	-
ENSEBUT00000027893	-	6490	-	ENSEBUP00000027317	420 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016742	-	99	91.489	ENSG00000086589	RBM22	100	83.871	Homo_sapiens
ENSEBUG00000016742	-	98	91.489	ENSAPOG00000010338	rbm22	90	91.489	Acanthochromis_polyacanthus
ENSEBUG00000016742	-	99	91.489	ENSAMEG00000004544	RBM22	91	91.489	Ailuropoda_melanoleuca
ENSEBUG00000016742	-	99	69.789	ENSACIG00000016372	rbm22	98	69.087	Amphilophus_citrinellus
ENSEBUG00000016742	-	98	91.489	ENSAOCG00000007179	rbm22	90	91.489	Amphiprion_ocellaris
ENSEBUG00000016742	-	98	91.489	ENSAPEG00000016689	rbm22	90	91.489	Amphiprion_percula
ENSEBUG00000016742	-	98	91.489	ENSATEG00000008286	rbm22	90	91.489	Anabas_testudineus
ENSEBUG00000016742	-	97	78.049	ENSAPLG00000016408	RBM22	98	76.029	Anas_platyrhynchos
ENSEBUG00000016742	-	99	91.489	ENSACAG00000014750	RBM22	91	91.489	Anolis_carolinensis
ENSEBUG00000016742	-	91	71.802	ENSANAG00000019688	-	99	71.802	Aotus_nancymaae
ENSEBUG00000016742	-	99	91.489	ENSANAG00000033743	-	91	91.489	Aotus_nancymaae
ENSEBUG00000016742	-	98	91.489	ENSACLG00000008863	rbm22	98	75.000	Astatotilapia_calliptera
ENSEBUG00000016742	-	99	87.234	ENSAMXG00000038080	rbm22	81	87.234	Astyanax_mexicanus
ENSEBUG00000016742	-	98	87.234	ENSAMXG00000018529	-	91	87.234	Astyanax_mexicanus
ENSEBUG00000016742	-	99	91.489	ENSBTAG00000030366	RBM22	91	91.489	Bos_taurus
ENSEBUG00000016742	-	97	68.750	WBGene00011722	rbm-22	77	60.510	Caenorhabditis_elegans
ENSEBUG00000016742	-	99	91.489	ENSCJAG00000020963	RBM22	91	91.489	Callithrix_jacchus
ENSEBUG00000016742	-	85	89.362	ENSCJAG00000013247	-	78	89.362	Callithrix_jacchus
ENSEBUG00000016742	-	99	91.489	ENSCAFG00000018082	RBM22	99	78.333	Canis_familiaris
ENSEBUG00000016742	-	99	91.489	ENSCAFG00020023671	RBM22	91	91.489	Canis_lupus_dingo
ENSEBUG00000016742	-	99	91.489	ENSCHIG00000015561	RBM22	91	91.489	Capra_hircus
ENSEBUG00000016742	-	99	91.489	ENSTSYG00000003939	-	91	91.489	Carlito_syrichta
ENSEBUG00000016742	-	87	68.207	ENSTSYG00000037586	-	99	68.207	Carlito_syrichta
ENSEBUG00000016742	-	92	76.227	ENSCAPG00000002598	RBM22	95	75.194	Cavia_aperea
ENSEBUG00000016742	-	99	91.489	ENSCPOG00000001946	RBM22	91	91.489	Cavia_porcellus
ENSEBUG00000016742	-	99	91.489	ENSCCAG00000033546	RBM22	91	91.489	Cebus_capucinus
ENSEBUG00000016742	-	99	91.489	ENSCATG00000042133	RBM22	91	91.489	Cercocebus_atys
ENSEBUG00000016742	-	99	91.489	ENSCLAG00000010842	-	91	91.489	Chinchilla_lanigera
ENSEBUG00000016742	-	99	61.722	ENSCLAG00000014221	-	93	60.287	Chinchilla_lanigera
ENSEBUG00000016742	-	99	65.707	ENSCLAG00000007106	-	99	65.707	Chinchilla_lanigera
ENSEBUG00000016742	-	93	91.489	ENSCSAG00000019006	-	85	91.489	Chlorocebus_sabaeus
ENSEBUG00000016742	-	99	91.489	ENSCHOG00000013522	-	91	91.489	Choloepus_hoffmanni
ENSEBUG00000016742	-	99	91.111	ENSCHOG00000001041	-	91	91.111	Choloepus_hoffmanni
ENSEBUG00000016742	-	71	80.936	ENSCHOG00000004192	-	98	80.612	Choloepus_hoffmanni
ENSEBUG00000016742	-	99	91.489	ENSCPBG00000010094	RBM22	91	91.489	Chrysemys_picta_bellii
ENSEBUG00000016742	-	99	80.851	ENSCING00000005843	zf(c3h)-12	94	72.222	Ciona_intestinalis
ENSEBUG00000016742	-	99	82.979	ENSCSAVG00000009145	-	94	74.074	Ciona_savignyi
ENSEBUG00000016742	-	99	91.489	ENSCANG00000025232	RBM22	91	91.489	Colobus_angolensis_palliatus
ENSEBUG00000016742	-	99	91.489	ENSCGRG00001015110	Rbm22	91	91.489	Cricetulus_griseus_chok1gshd
ENSEBUG00000016742	-	99	74.638	ENSCGRG00000011751	Rbm22	98	74.638	Cricetulus_griseus_crigri
ENSEBUG00000016742	-	98	91.489	ENSCSEG00000010790	rbm22	90	91.489	Cynoglossus_semilaevis
ENSEBUG00000016742	-	98	91.489	ENSCVAG00000010670	rbm22	90	91.489	Cyprinodon_variegatus
ENSEBUG00000016742	-	99	87.234	ENSDARG00000010238	rbm22	92	87.234	Danio_rerio
ENSEBUG00000016742	-	99	91.489	ENSDNOG00000011166	RBM22	91	91.489	Dasypus_novemcinctus
ENSEBUG00000016742	-	99	59.809	ENSDORG00000005329	Rbm22	99	59.341	Dipodomys_ordii
ENSEBUG00000016742	-	98	82.979	FBgn0037220	CG14641	69	75.926	Drosophila_melanogaster
ENSEBUG00000016742	-	99	91.489	ENSEASG00005002681	RBM22	91	91.489	Equus_asinus_asinus
ENSEBUG00000016742	-	99	91.489	ENSECAG00000014940	RBM22	72	91.489	Equus_caballus
ENSEBUG00000016742	-	99	91.489	ENSEEUG00000005638	-	92	91.489	Erinaceus_europaeus
ENSEBUG00000016742	-	97	82.979	ENSEEUG00000009778	-	99	62.440	Erinaceus_europaeus
ENSEBUG00000016742	-	99	89.362	ENSELUG00000001106	rbm22	91	89.362	Esox_lucius
ENSEBUG00000016742	-	99	91.489	ENSFCAG00000018845	RBM22	91	91.489	Felis_catus
ENSEBUG00000016742	-	99	89.362	ENSFALG00000008051	RBM22	91	89.362	Ficedula_albicollis
ENSEBUG00000016742	-	99	91.489	ENSFDAG00000020067	RBM22	91	91.489	Fukomys_damarensis
ENSEBUG00000016742	-	98	91.489	ENSFHEG00000014032	rbm22	98	75.238	Fundulus_heteroclitus
ENSEBUG00000016742	-	98	89.362	ENSGMOG00000010186	rbm22	92	89.362	Gadus_morhua
ENSEBUG00000016742	-	99	89.362	ENSGALG00000004555	RBM22	91	89.362	Gallus_gallus
ENSEBUG00000016742	-	98	91.489	ENSGAFG00000008621	rbm22	90	91.489	Gambusia_affinis
ENSEBUG00000016742	-	98	91.489	ENSGACG00000018027	rbm22	91	91.489	Gasterosteus_aculeatus
ENSEBUG00000016742	-	99	91.489	ENSGAGG00000024305	RBM22	91	91.489	Gopherus_agassizii
ENSEBUG00000016742	-	99	91.489	ENSGGOG00000012947	RBM22	91	91.489	Gorilla_gorilla
ENSEBUG00000016742	-	98	91.489	ENSHBUG00000002941	rbm22	98	75.000	Haplochromis_burtoni
ENSEBUG00000016742	-	99	91.489	ENSHGLG00000008488	RBM22	91	91.489	Heterocephalus_glaber_female
ENSEBUG00000016742	-	97	94.872	ENSHGLG00100006872	RBM22	90	94.872	Heterocephalus_glaber_male
ENSEBUG00000016742	-	84	91.489	ENSHCOG00000016334	rbm22	92	76.294	Hippocampus_comes
ENSEBUG00000016742	-	99	89.362	ENSIPUG00000019751	rbm22	92	89.362	Ictalurus_punctatus
ENSEBUG00000016742	-	99	65.311	ENSSTOG00000027197	RBM22	99	65.311	Ictidomys_tridecemlineatus
ENSEBUG00000016742	-	99	65.394	ENSSTOG00000029346	-	97	64.678	Ictidomys_tridecemlineatus
ENSEBUG00000016742	-	99	91.489	ENSJJAG00000009565	Rbm22	91	91.489	Jaculus_jaculus
ENSEBUG00000016742	-	98	91.489	ENSKMAG00000004354	rbm22	98	75.476	Kryptolebias_marmoratus
ENSEBUG00000016742	-	98	91.489	ENSLBEG00000027750	rbm22	85	91.489	Labrus_bergylta
ENSEBUG00000016742	-	99	89.362	ENSLOCG00000010989	rbm22	92	89.362	Lepisosteus_oculatus
ENSEBUG00000016742	-	99	91.489	ENSLAFG00000006638	RBM22	91	91.489	Loxodonta_africana
ENSEBUG00000016742	-	99	91.489	ENSMFAG00000004034	RBM22	91	91.489	Macaca_fascicularis
ENSEBUG00000016742	-	99	91.489	ENSMMUG00000020683	RBM22	91	91.489	Macaca_mulatta
ENSEBUG00000016742	-	99	91.489	ENSMNEG00000035500	RBM22	91	91.489	Macaca_nemestrina
ENSEBUG00000016742	-	99	91.489	ENSMLEG00000034825	RBM22	91	91.489	Mandrillus_leucophaeus
ENSEBUG00000016742	-	98	91.489	ENSMAMG00000007370	rbm22	98	75.000	Mastacembelus_armatus
ENSEBUG00000016742	-	98	91.489	ENSMZEG00005013001	rbm22	98	75.000	Maylandia_zebra
ENSEBUG00000016742	-	99	89.362	ENSMGAG00000006298	RBM22	91	89.362	Meleagris_gallopavo
ENSEBUG00000016742	-	99	91.489	ENSMAUG00000001133	Rbm22	91	91.489	Mesocricetus_auratus
ENSEBUG00000016742	-	99	91.489	ENSMICG00000033712	RBM22	91	91.489	Microcebus_murinus
ENSEBUG00000016742	-	99	91.489	ENSMOCG00000018311	Rbm22	91	91.489	Microtus_ochrogaster
ENSEBUG00000016742	-	98	91.489	ENSMMOG00000003192	rbm22	98	75.238	Mola_mola
ENSEBUG00000016742	-	99	85.106	ENSMODG00000006398	-	91	85.106	Monodelphis_domestica
ENSEBUG00000016742	-	99	91.489	ENSMODG00000009574	-	91	91.489	Monodelphis_domestica
ENSEBUG00000016742	-	98	91.489	ENSMALG00000013964	rbm22	90	91.489	Monopterus_albus
ENSEBUG00000016742	-	99	91.489	MGP_CAROLIEiJ_G0022307	Rbm22	91	91.489	Mus_caroli
ENSEBUG00000016742	-	99	91.489	ENSMUSG00000024604	Rbm22	91	91.489	Mus_musculus
ENSEBUG00000016742	-	99	91.489	MGP_PahariEiJ_G0019037	Rbm22	91	91.489	Mus_pahari
ENSEBUG00000016742	-	99	91.489	MGP_SPRETEiJ_G0023219	Rbm22	91	91.489	Mus_spretus
ENSEBUG00000016742	-	99	91.489	ENSMPUG00000013760	RBM22	91	91.489	Mustela_putorius_furo
ENSEBUG00000016742	-	99	91.489	ENSMLUG00000009040	RBM22	91	91.489	Myotis_lucifugus
ENSEBUG00000016742	-	99	91.489	ENSMLUG00000003461	-	91	91.489	Myotis_lucifugus
ENSEBUG00000016742	-	99	91.489	ENSNGAG00000018233	Rbm22	91	91.489	Nannospalax_galili
ENSEBUG00000016742	-	88	73.867	ENSNBRG00000010458	rbm22	95	73.842	Neolamprologus_brichardi
ENSEBUG00000016742	-	99	91.489	ENSNLEG00000010397	-	91	91.489	Nomascus_leucogenys
ENSEBUG00000016742	-	99	69.928	ENSMEUG00000009348	-	99	70.167	Notamacropus_eugenii
ENSEBUG00000016742	-	77	91.304	ENSMEUG00000001573	-	58	91.304	Notamacropus_eugenii
ENSEBUG00000016742	-	99	62.830	ENSOPRG00000016612	-	99	60.192	Ochotona_princeps
ENSEBUG00000016742	-	99	91.489	ENSOPRG00000008481	-	91	91.489	Ochotona_princeps
ENSEBUG00000016742	-	99	91.489	ENSODEG00000005016	RBM22	91	91.489	Octodon_degus
ENSEBUG00000016742	-	99	75.772	ENSONIG00000013049	rbm22	99	73.634	Oreochromis_niloticus
ENSEBUG00000016742	-	99	91.489	ENSOANG00000002314	RBM22	91	91.489	Ornithorhynchus_anatinus
ENSEBUG00000016742	-	99	91.489	ENSOCUG00000011532	RBM22	91	91.489	Oryctolagus_cuniculus
ENSEBUG00000016742	-	99	75.714	ENSORLG00000004975	rbm22	98	75.476	Oryzias_latipes
ENSEBUG00000016742	-	99	75.714	ENSORLG00020012969	rbm22	98	75.476	Oryzias_latipes_hni
ENSEBUG00000016742	-	99	75.714	ENSORLG00015022508	rbm22	98	75.476	Oryzias_latipes_hsok
ENSEBUG00000016742	-	99	75.714	ENSOMEG00000004904	rbm22	98	75.238	Oryzias_melastigma
ENSEBUG00000016742	-	99	91.489	ENSOGAG00000011086	RBM22	91	91.489	Otolemur_garnettii
ENSEBUG00000016742	-	99	91.489	ENSOARG00000007633	RBM22	91	91.489	Ovis_aries
ENSEBUG00000016742	-	99	91.489	ENSPPAG00000034432	RBM22	91	91.489	Pan_paniscus
ENSEBUG00000016742	-	99	91.489	ENSPPRG00000011577	RBM22	91	91.489	Panthera_pardus
ENSEBUG00000016742	-	99	91.489	ENSPTIG00000004453	RBM22	91	91.489	Panthera_tigris_altaica
ENSEBUG00000016742	-	99	91.489	ENSPTRG00000017423	RBM22	91	91.489	Pan_troglodytes
ENSEBUG00000016742	-	99	91.489	ENSPANG00000011297	RBM22	91	91.489	Papio_anubis
ENSEBUG00000016742	-	99	91.489	ENSPKIG00000010315	rbm22	92	91.489	Paramormyrops_kingsleyae
ENSEBUG00000016742	-	97	91.489	ENSPKIG00000019326	rbm22	76	91.489	Paramormyrops_kingsleyae
ENSEBUG00000016742	-	99	91.489	ENSPSIG00000012818	RBM22	91	91.489	Pelodiscus_sinensis
ENSEBUG00000016742	-	98	91.489	ENSPMGG00000017638	rbm22	92	91.489	Periophthalmus_magnuspinnatus
ENSEBUG00000016742	-	99	91.489	ENSPEMG00000001753	Rbm22	91	91.489	Peromyscus_maniculatus_bairdii
ENSEBUG00000016742	-	90	70.898	ENSPMAG00000007317	-	99	76.331	Petromyzon_marinus
ENSEBUG00000016742	-	99	66.507	ENSPCIG00000015088	RBM22	99	66.507	Phascolarctos_cinereus
ENSEBUG00000016742	-	98	91.489	ENSPFOG00000005625	rbm22	90	91.489	Poecilia_formosa
ENSEBUG00000016742	-	98	91.489	ENSPLAG00000006344	rbm22	90	91.489	Poecilia_latipinna
ENSEBUG00000016742	-	99	70.238	ENSPMEG00000007992	rbm22	98	72.727	Poecilia_mexicana
ENSEBUG00000016742	-	98	91.489	ENSPREG00000003546	rbm22	90	91.489	Poecilia_reticulata
ENSEBUG00000016742	-	99	91.489	ENSPPYG00000015955	RBM22	91	91.489	Pongo_abelii
ENSEBUG00000016742	-	85	91.667	ENSPCAG00000015091	RBM22	78	91.667	Procavia_capensis
ENSEBUG00000016742	-	99	91.489	ENSPVAG00000014231	RBM22	91	91.489	Pteropus_vampyrus
ENSEBUG00000016742	-	87	73.842	ENSPNYG00000000380	rbm22	95	73.842	Pundamilia_nyererei
ENSEBUG00000016742	-	98	89.362	ENSPNAG00000010001	-	91	89.362	Pygocentrus_nattereri
ENSEBUG00000016742	-	99	87.234	ENSPNAG00000002687	rbm22	92	87.234	Pygocentrus_nattereri
ENSEBUG00000016742	-	99	91.489	ENSRNOG00000019235	Rbm22	91	91.489	Rattus_norvegicus
ENSEBUG00000016742	-	99	91.489	ENSRBIG00000041683	RBM22	91	91.489	Rhinopithecus_bieti
ENSEBUG00000016742	-	99	91.489	ENSRROG00000041637	RBM22	91	91.489	Rhinopithecus_roxellana
ENSEBUG00000016742	-	99	91.489	ENSSBOG00000035400	-	91	91.489	Saimiri_boliviensis_boliviensis
ENSEBUG00000016742	-	99	89.362	ENSSHAG00000017734	-	91	89.362	Sarcophilus_harrisii
ENSEBUG00000016742	-	99	89.362	ENSSFOG00015022259	rbm22	91	89.362	Scleropages_formosus
ENSEBUG00000016742	-	99	89.362	ENSSFOG00015014955	rbm22	92	89.362	Scleropages_formosus
ENSEBUG00000016742	-	98	91.489	ENSSMAG00000002921	rbm22	90	91.489	Scophthalmus_maximus
ENSEBUG00000016742	-	98	91.489	ENSSDUG00000003846	rbm22	90	91.489	Seriola_dumerili
ENSEBUG00000016742	-	98	91.489	ENSSLDG00000003804	rbm22	90	91.489	Seriola_lalandi_dorsalis
ENSEBUG00000016742	-	99	91.489	ENSSPUG00000003986	RBM22	91	91.489	Sphenodon_punctatus
ENSEBUG00000016742	-	98	91.489	ENSSPAG00000000383	rbm22	90	91.489	Stegastes_partitus
ENSEBUG00000016742	-	99	91.489	ENSSSCG00000023231	RBM22	91	91.489	Sus_scrofa
ENSEBUG00000016742	-	99	89.362	ENSTGUG00000000850	RBM22	91	89.362	Taeniopygia_guttata
ENSEBUG00000016742	-	98	91.489	ENSTRUG00000004724	rbm22	90	91.489	Takifugu_rubripes
ENSEBUG00000016742	-	99	91.304	ENSTBEG00000005617	RBM22	84	91.304	Tupaia_belangeri
ENSEBUG00000016742	-	99	91.489	ENSTTRG00000012778	RBM22	91	91.489	Tursiops_truncatus
ENSEBUG00000016742	-	99	91.489	ENSUAMG00000025133	RBM22	91	91.489	Ursus_americanus
ENSEBUG00000016742	-	99	91.489	ENSUMAG00000003651	RBM22	91	91.489	Ursus_maritimus
ENSEBUG00000016742	-	99	91.489	ENSVVUG00000007193	RBM22	91	91.489	Vulpes_vulpes
ENSEBUG00000016742	-	99	91.489	ENSXETG00000020435	rbm22	91	91.489	Xenopus_tropicalis
ENSEBUG00000016742	-	98	91.304	ENSXCOG00000003316	rbm22	91	91.304	Xiphophorus_couchianus
ENSEBUG00000016742	-	98	91.489	ENSXMAG00000008681	rbm22	90	91.489	Xiphophorus_maculatus