EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016780 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 69584 bases
Position: chrFYBX02010607.1:421348-490931
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027382	zf-C2H2	PF00096.26	1.8e-11	1	2
ENSEBUP00000027382	zf-C2H2	PF00096.26	1.8e-11	2	2
ENSEBUP00000027382	zf-met	PF12874.7	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027958	-	2902	-	ENSEBUP00000027382	445 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016780	prdm12b	78	64.387	ENSG00000130711	PRDM12	88	62.963	Homo_sapiens
ENSEBUG00000016780	prdm12b	76	54.142	ENSAPOG00000018234	-	90	55.162	Acanthochromis_polyacanthus
ENSEBUG00000016780	prdm12b	80	64.365	ENSAPOG00000016051	prdm12b	84	66.967	Acanthochromis_polyacanthus
ENSEBUG00000016780	prdm12b	77	65.706	ENSAMEG00000016234	PRDM12	98	64.265	Ailuropoda_melanoleuca
ENSEBUG00000016780	prdm12b	74	65.043	ENSACIG00000005193	-	87	63.897	Amphilophus_citrinellus
ENSEBUG00000016780	prdm12b	80	65.000	ENSACIG00000019578	prdm12b	88	64.244	Amphilophus_citrinellus
ENSEBUG00000016780	prdm12b	80	63.812	ENSAOCG00000015040	prdm12b	84	66.066	Amphiprion_ocellaris
ENSEBUG00000016780	prdm12b	75	61.538	ENSAPEG00000022849	-	85	59.718	Amphiprion_percula
ENSEBUG00000016780	prdm12b	80	64.088	ENSAPEG00000015092	prdm12b	84	66.366	Amphiprion_percula
ENSEBUG00000016780	prdm12b	78	64.873	ENSATEG00000014595	-	95	64.103	Anabas_testudineus
ENSEBUG00000016780	prdm12b	78	64.387	ENSANAG00000020616	PRDM12	95	62.963	Aotus_nancymaae
ENSEBUG00000016780	prdm12b	75	63.714	ENSACLG00000007631	-	83	63.897	Astatotilapia_calliptera
ENSEBUG00000016780	prdm12b	83	61.273	ENSACLG00000011876	prdm12b	93	59.947	Astatotilapia_calliptera
ENSEBUG00000016780	prdm12b	77	66.571	ENSAMXG00000033665	prdm12b	90	64.407	Astyanax_mexicanus
ENSEBUG00000016780	prdm12b	84	63.032	ENSAMXG00000008540	PRDM12	97	61.702	Astyanax_mexicanus
ENSEBUG00000016780	prdm12b	78	64.103	ENSBTAG00000023797	PRDM12	89	62.678	Bos_taurus
ENSEBUG00000016780	prdm12b	78	64.387	ENSCJAG00000020540	PRDM12	90	62.963	Callithrix_jacchus
ENSEBUG00000016780	prdm12b	69	67.101	ENSCAFG00000023076	PRDM12	76	70.221	Canis_familiaris
ENSEBUG00000016780	prdm12b	78	64.103	ENSCAFG00020024046	PRDM12	89	62.678	Canis_lupus_dingo
ENSEBUG00000016780	prdm12b	78	64.103	ENSCHIG00000025005	PRDM12	89	62.678	Capra_hircus
ENSEBUG00000016780	prdm12b	74	62.687	ENSCPOG00000005901	PRDM12	93	61.194	Cavia_porcellus
ENSEBUG00000016780	prdm12b	78	64.387	ENSCCAG00000037485	PRDM12	89	62.963	Cebus_capucinus
ENSEBUG00000016780	prdm12b	78	64.387	ENSCATG00000020327	PRDM12	89	62.963	Cercocebus_atys
ENSEBUG00000016780	prdm12b	78	63.818	ENSCLAG00000005499	PRDM12	88	62.393	Chinchilla_lanigera
ENSEBUG00000016780	prdm12b	78	64.387	ENSCSAG00000014756	PRDM12	89	62.963	Chlorocebus_sabaeus
ENSEBUG00000016780	prdm12b	78	64.000	ENSCPBG00000022628	PRDM12	91	62.571	Chrysemys_picta_bellii
ENSEBUG00000016780	prdm12b	78	63.818	ENSCGRG00001015005	Prdm12	88	62.393	Cricetulus_griseus_chok1gshd
ENSEBUG00000016780	prdm12b	74	67.059	ENSCVAG00000000944	-	86	66.569	Cyprinodon_variegatus
ENSEBUG00000016780	prdm12b	74	66.567	ENSCVAG00000017166	prdm12b	85	66.866	Cyprinodon_variegatus
ENSEBUG00000016780	prdm12b	79	65.634	ENSDARG00000007430	prdm12b	91	64.225	Danio_rerio
ENSEBUG00000016780	prdm12b	78	63.636	ENSDNOG00000042302	PRDM12	90	62.216	Dasypus_novemcinctus
ENSEBUG00000016780	prdm12b	78	64.103	ENSEASG00005008472	PRDM12	89	62.678	Equus_asinus_asinus
ENSEBUG00000016780	prdm12b	78	64.103	ENSECAG00000005933	PRDM12	89	62.678	Equus_caballus
ENSEBUG00000016780	prdm12b	78	66.097	ENSELUG00000009905	prdm12b	90	64.672	Esox_lucius
ENSEBUG00000016780	prdm12b	80	62.674	ENSELUG00000013674	PRDM12	91	63.231	Esox_lucius
ENSEBUG00000016780	prdm12b	78	64.103	ENSFCAG00000043086	PRDM12	89	62.678	Felis_catus
ENSEBUG00000016780	prdm12b	75	66.667	ENSFALG00000001445	PRDM12	84	61.370	Ficedula_albicollis
ENSEBUG00000016780	prdm12b	74	66.172	ENSFHEG00000003944	prdm12b	84	66.168	Fundulus_heteroclitus
ENSEBUG00000016780	prdm12b	81	62.766	ENSFHEG00000007746	-	89	61.273	Fundulus_heteroclitus
ENSEBUG00000016780	prdm12b	73	67.674	ENSGMOG00000011797	prdm12b	87	65.179	Gadus_morhua
ENSEBUG00000016780	prdm12b	75	66.667	ENSGALG00000003895	PRDM12	87	65.179	Gallus_gallus
ENSEBUG00000016780	prdm12b	74	67.560	ENSGAFG00000010827	prdm12b	84	66.567	Gambusia_affinis
ENSEBUG00000016780	prdm12b	76	64.912	ENSGACG00000016713	prdm12b	87	63.450	Gasterosteus_aculeatus
ENSEBUG00000016780	prdm12b	78	64.000	ENSGAGG00000014083	PRDM12	91	62.571	Gopherus_agassizii
ENSEBUG00000016780	prdm12b	78	64.103	ENSGGOG00000010568	PRDM12	88	62.678	Gorilla_gorilla
ENSEBUG00000016780	prdm12b	75	63.714	ENSHBUG00000022537	-	77	63.714	Haplochromis_burtoni
ENSEBUG00000016780	prdm12b	83	62.599	ENSHBUG00000022878	prdm12b	93	62.334	Haplochromis_burtoni
ENSEBUG00000016780	prdm12b	78	64.672	ENSHGLG00000013939	PRDM12	88	62.678	Heterocephalus_glaber_female
ENSEBUG00000016780	prdm12b	73	65.964	ENSHCOG00000003663	prdm12b	83	65.282	Hippocampus_comes
ENSEBUG00000016780	prdm12b	74	64.223	ENSHCOG00000021167	-	87	62.757	Hippocampus_comes
ENSEBUG00000016780	prdm12b	74	68.182	ENSIPUG00000019544	PRDM12	85	66.667	Ictalurus_punctatus
ENSEBUG00000016780	prdm12b	82	64.151	ENSIPUG00000017053	prdm12b	88	66.377	Ictalurus_punctatus
ENSEBUG00000016780	prdm12b	78	63.818	ENSSTOG00000005986	PRDM12	85	62.393	Ictidomys_tridecemlineatus
ENSEBUG00000016780	prdm12b	78	64.387	ENSJJAG00000005424	Prdm12	98	62.963	Jaculus_jaculus
ENSEBUG00000016780	prdm12b	75	64.535	ENSKMAG00000021205	-	90	62.678	Kryptolebias_marmoratus
ENSEBUG00000016780	prdm12b	73	69.069	ENSKMAG00000016921	prdm12b	82	68.468	Kryptolebias_marmoratus
ENSEBUG00000016780	prdm12b	83	60.590	ENSLBEG00000017769	prdm12b	86	64.809	Labrus_bergylta
ENSEBUG00000016780	prdm12b	76	65.497	ENSLBEG00000007776	-	86	65.205	Labrus_bergylta
ENSEBUG00000016780	prdm12b	77	65.029	ENSLACG00000017560	PRDM12	90	63.584	Latimeria_chalumnae
ENSEBUG00000016780	prdm12b	79	64.507	ENSLOCG00000005429	prdm12b	91	64.225	Lepisosteus_oculatus
ENSEBUG00000016780	prdm12b	78	64.205	ENSLAFG00000006979	PRDM12	98	59.091	Loxodonta_africana
ENSEBUG00000016780	prdm12b	78	64.387	ENSMFAG00000040322	PRDM12	88	62.963	Macaca_fascicularis
ENSEBUG00000016780	prdm12b	78	64.387	ENSMNEG00000037234	PRDM12	89	62.963	Macaca_nemestrina
ENSEBUG00000016780	prdm12b	79	61.685	ENSMAMG00000018988	-	87	60.326	Mastacembelus_armatus
ENSEBUG00000016780	prdm12b	73	68.788	ENSMAMG00000013212	prdm12b	84	67.273	Mastacembelus_armatus
ENSEBUG00000016780	prdm12b	75	63.714	ENSMZEG00005000415	PRDM12	94	58.734	Maylandia_zebra
ENSEBUG00000016780	prdm12b	75	66.667	ENSMGAG00000005438	PRDM12	87	65.179	Meleagris_gallopavo
ENSEBUG00000016780	prdm12b	78	64.873	ENSMAUG00000013040	Prdm12	88	63.456	Mesocricetus_auratus
ENSEBUG00000016780	prdm12b	78	64.103	ENSMICG00000015480	PRDM12	89	62.678	Microcebus_murinus
ENSEBUG00000016780	prdm12b	78	63.818	ENSMOCG00000021026	Prdm12	88	62.393	Microtus_ochrogaster
ENSEBUG00000016780	prdm12b	75	65.782	ENSMODG00000012108	PRDM12	87	64.307	Monodelphis_domestica
ENSEBUG00000016780	prdm12b	62	69.818	ENSMALG00000021901	prdm12b	77	69.403	Monopterus_albus
ENSEBUG00000016780	prdm12b	78	63.818	MGP_CAROLIEiJ_G0023414	Prdm12	88	62.393	Mus_caroli
ENSEBUG00000016780	prdm12b	78	63.818	ENSMUSG00000079466	Prdm12	88	62.393	Mus_musculus
ENSEBUG00000016780	prdm12b	78	63.818	MGP_PahariEiJ_G0024871	Prdm12	88	62.393	Mus_pahari
ENSEBUG00000016780	prdm12b	78	63.818	MGP_SPRETEiJ_G0024331	Prdm12	88	62.393	Mus_spretus
ENSEBUG00000016780	prdm12b	77	64.183	ENSNGAG00000018480	Prdm12	92	62.678	Nannospalax_galili
ENSEBUG00000016780	prdm12b	73	67.568	ENSNBRG00000006727	prdm12b	85	67.868	Neolamprologus_brichardi
ENSEBUG00000016780	prdm12b	75	60.745	ENSNBRG00000024312	-	89	62.130	Neolamprologus_brichardi
ENSEBUG00000016780	prdm12b	75	45.906	ENSMEUG00000003828	PRDM12	87	46.784	Notamacropus_eugenii
ENSEBUG00000016780	prdm12b	78	63.533	ENSOPRG00000008680	PRDM12	98	62.108	Ochotona_princeps
ENSEBUG00000016780	prdm12b	74	65.476	ENSODEG00000016282	PRDM12	61	62.678	Octodon_degus
ENSEBUG00000016780	prdm12b	56	63.745	ENSOANG00000001043	PRDM12	100	63.745	Ornithorhynchus_anatinus
ENSEBUG00000016780	prdm12b	52	86.364	ENSOCUG00000008241	PRDM12	97	62.952	Oryctolagus_cuniculus
ENSEBUG00000016780	prdm12b	73	66.962	ENSORLG00000017558	-	87	62.810	Oryzias_latipes
ENSEBUG00000016780	prdm12b	73	68.769	ENSORLG00000007114	prdm12b	85	67.868	Oryzias_latipes
ENSEBUG00000016780	prdm12b	73	67.257	ENSORLG00020013167	-	87	63.085	Oryzias_latipes_hni
ENSEBUG00000016780	prdm12b	73	68.769	ENSORLG00020019565	prdm12b	93	63.200	Oryzias_latipes_hni
ENSEBUG00000016780	prdm12b	73	67.066	ENSORLG00015007621	prdm12b	85	66.766	Oryzias_latipes_hsok
ENSEBUG00000016780	prdm12b	74	66.181	ENSORLG00015003435	-	87	62.810	Oryzias_latipes_hsok
ENSEBUG00000016780	prdm12b	75	66.000	ENSOMEG00000007762	-	90	64.571	Oryzias_melastigma
ENSEBUG00000016780	prdm12b	73	67.964	ENSOMEG00000004134	prdm12b	93	62.766	Oryzias_melastigma
ENSEBUG00000016780	prdm12b	78	64.103	ENSOGAG00000007557	PRDM12	97	62.678	Otolemur_garnettii
ENSEBUG00000016780	prdm12b	68	59.547	ENSPPAG00000031506	-	95	57.929	Pan_paniscus
ENSEBUG00000016780	prdm12b	78	58.523	ENSPPRG00000023024	PRDM12	83	57.102	Panthera_pardus
ENSEBUG00000016780	prdm12b	78	64.387	ENSPTRG00000043324	-	88	62.963	Pan_troglodytes
ENSEBUG00000016780	prdm12b	78	64.387	ENSPTRG00000021475	PRDM12	88	62.963	Pan_troglodytes
ENSEBUG00000016780	prdm12b	78	64.387	ENSPANG00000025967	PRDM12	89	62.963	Papio_anubis
ENSEBUG00000016780	prdm12b	76	63.158	ENSPKIG00000004305	PRDM12	91	61.404	Paramormyrops_kingsleyae
ENSEBUG00000016780	prdm12b	84	61.741	ENSPKIG00000007228	prdm12b	91	63.380	Paramormyrops_kingsleyae
ENSEBUG00000016780	prdm12b	75	65.588	ENSPSIG00000006739	PRDM12	88	64.118	Pelodiscus_sinensis
ENSEBUG00000016780	prdm12b	74	66.467	ENSPMGG00000008867	prdm12b	83	65.559	Periophthalmus_magnuspinnatus
ENSEBUG00000016780	prdm12b	77	64.857	ENSPMGG00000002356	-	83	63.429	Periophthalmus_magnuspinnatus
ENSEBUG00000016780	prdm12b	78	63.818	ENSPEMG00000009969	Prdm12	89	62.393	Peromyscus_maniculatus_bairdii
ENSEBUG00000016780	prdm12b	75	65.782	ENSPCIG00000024119	PRDM12	87	64.307	Phascolarctos_cinereus
ENSEBUG00000016780	prdm12b	74	67.857	ENSPFOG00000019841	prdm12b	86	66.369	Poecilia_formosa
ENSEBUG00000016780	prdm12b	74	67.560	ENSPLAG00000016626	prdm12b	83	66.567	Poecilia_latipinna
ENSEBUG00000016780	prdm12b	74	67.560	ENSPMEG00000016698	prdm12b	85	66.567	Poecilia_mexicana
ENSEBUG00000016780	prdm12b	71	64.264	ENSPREG00000003211	-	84	62.763	Poecilia_reticulata
ENSEBUG00000016780	prdm12b	74	68.155	ENSPREG00000015073	prdm12b	93	62.400	Poecilia_reticulata
ENSEBUG00000016780	prdm12b	77	64.470	ENSPPYG00000019694	PRDM12	91	63.037	Pongo_abelii
ENSEBUG00000016780	prdm12b	78	64.103	ENSPCOG00000022255	PRDM12	88	62.678	Propithecus_coquereli
ENSEBUG00000016780	prdm12b	78	64.103	ENSPVAG00000001511	PRDM12	88	62.678	Pteropus_vampyrus
ENSEBUG00000016780	prdm12b	83	62.865	ENSPNYG00000009607	prdm12b	93	62.334	Pundamilia_nyererei
ENSEBUG00000016780	prdm12b	75	63.714	ENSPNYG00000013589	-	83	63.897	Pundamilia_nyererei
ENSEBUG00000016780	prdm12b	76	67.930	ENSPNAG00000024532	prdm12b	87	66.472	Pygocentrus_nattereri
ENSEBUG00000016780	prdm12b	73	65.976	ENSPNAG00000013396	PRDM12	83	64.497	Pygocentrus_nattereri
ENSEBUG00000016780	prdm12b	78	63.818	ENSRNOG00000009218	Prdm12	88	62.393	Rattus_norvegicus
ENSEBUG00000016780	prdm12b	75	63.422	ENSRBIG00000042712	PRDM12	98	56.853	Rhinopithecus_bieti
ENSEBUG00000016780	prdm12b	76	63.848	ENSRROG00000043554	PRDM12	98	62.391	Rhinopithecus_roxellana
ENSEBUG00000016780	prdm12b	75	64.897	ENSSHAG00000015972	PRDM12	87	64.897	Sarcophilus_harrisii
ENSEBUG00000016780	prdm12b	74	66.568	ENSSMAG00000003754	prdm12b	94	61.155	Scophthalmus_maximus
ENSEBUG00000016780	prdm12b	73	67.964	ENSSDUG00000023498	prdm12b	85	66.667	Seriola_dumerili
ENSEBUG00000016780	prdm12b	82	63.388	ENSSDUG00000019071	-	87	66.667	Seriola_dumerili
ENSEBUG00000016780	prdm12b	75	65.396	ENSSLDG00000013562	-	89	64.201	Seriola_lalandi_dorsalis
ENSEBUG00000016780	prdm12b	73	66.467	ENSSLDG00000009557	prdm12b	85	66.467	Seriola_lalandi_dorsalis
ENSEBUG00000016780	prdm12b	82	62.331	ENSSPUG00000013424	PRDM12	94	60.976	Sphenodon_punctatus
ENSEBUG00000016780	prdm12b	73	67.568	ENSSPAG00000018824	prdm12b	84	67.267	Stegastes_partitus
ENSEBUG00000016780	prdm12b	78	60.000	ENSSPAG00000022420	-	87	58.286	Stegastes_partitus
ENSEBUG00000016780	prdm12b	78	64.103	ENSSSCG00000005703	PRDM12	89	62.678	Sus_scrofa
ENSEBUG00000016780	prdm12b	74	65.089	ENSTRUG00000018659	prdm12b	85	64.809	Takifugu_rubripes
ENSEBUG00000016780	prdm12b	84	61.780	ENSTRUG00000013239	-	97	61.518	Takifugu_rubripes
ENSEBUG00000016780	prdm12b	77	64.000	ENSTNIG00000005859	-	91	62.571	Tetraodon_nigroviridis
ENSEBUG00000016780	prdm12b	74	66.469	ENSTNIG00000009020	prdm12b	83	65.663	Tetraodon_nigroviridis
ENSEBUG00000016780	prdm12b	78	64.103	ENSUAMG00000009653	PRDM12	89	62.678	Ursus_americanus
ENSEBUG00000016780	prdm12b	78	64.103	ENSVVUG00000027662	PRDM12	77	62.678	Vulpes_vulpes
ENSEBUG00000016780	prdm12b	74	66.864	ENSXCOG00000002836	prdm12b	84	65.385	Xiphophorus_couchianus
ENSEBUG00000016780	prdm12b	74	68.155	ENSXMAG00000005537	prdm12b	85	66.667	Xiphophorus_maculatus
ENSEBUG00000016780	prdm12b	75	65.625	ENSXMAG00000028012	-	91	60.317	Xiphophorus_maculatus