EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000016781 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 22450 bases
Position: chrFYBX02010255.1:173544-195993
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027422	TUDOR	PF00567.24	4.8e-34	1	2
ENSEBUP00000027422	TUDOR	PF00567.24	4.8e-34	2	2
ENSEBUP00000027411	TUDOR	PF00567.24	5.4e-34	1	2
ENSEBUP00000027411	TUDOR	PF00567.24	5.4e-34	2	2
ENSEBUP00000027391	TUDOR	PF00567.24	4.3e-28	1	2
ENSEBUP00000027391	TUDOR	PF00567.24	4.3e-28	2	2
ENSEBUP00000027383	TUDOR	PF00567.24	5.3e-28	1	2
ENSEBUP00000027383	TUDOR	PF00567.24	5.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000027998	-	2300	-	ENSEBUP00000027422	632 (aa)	-	-
ENSEBUT00000027959	-	2619	-	ENSEBUP00000027383	557 (aa)	-	-
ENSEBUT00000027987	-	2410	-	ENSEBUP00000027411	653 (aa)	-	-
ENSEBUT00000027967	-	2523	-	ENSEBUP00000027391	525 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016781	-	77	30.714	ENSAPLG00000003969	RNF17	54	30.714	Anas_platyrhynchos
ENSEBUG00000016781	-	83	35.537	ENSGAFG00000004463	rnf17	50	33.136	Gambusia_affinis
ENSEBUG00000016781	-	89	30.061	ENSIPUG00000001087	rnf17	50	30.061	Ictalurus_punctatus
ENSEBUG00000016781	-	88	30.303	ENSOMEG00000009891	rnf17	51	30.303	Oryzias_melastigma
ENSEBUG00000016781	-	78	30.882	ENSPSIG00000011245	RNF17	72	30.714	Pelodiscus_sinensis
ENSEBUG00000016781	-	97	31.538	ENSTNIG00000015681	rnf17	65	30.097	Tetraodon_nigroviridis
ENSEBUG00000016781	-	82	30.435	ENSXETG00000034020	RNF17	58	30.435	Xenopus_tropicalis
ENSEBUG00000016781	-	92	30.645	ENSXCOG00000018295	rnf17	54	30.909	Xiphophorus_couchianus
ENSEBUG00000016781	-	92	30.645	ENSXMAG00000014747	rnf17	59	30.909	Xiphophorus_maculatus