EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000016806 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 5104 bases
Position: chrFYBX02010309.1:25877-30980
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027424	RRM_1	PF00076.22	2.4e-31	1	2
ENSEBUP00000027424	RRM_1	PF00076.22	2.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000028000	-	1692	-	ENSEBUP00000027424	563 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000016806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000016806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000016806	rbm12	99	31.548	ENSEBUG00000002680	-	88	31.169
ENSEBUG00000016806	rbm12	76	34.978	ENSEBUG00000010930	-	91	34.978
ENSEBUG00000016806	rbm12	99	31.749	ENSEBUG00000004292	-	99	30.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000016806	rbm12	89	65.649	ENSG00000244462	RBM12	84	66.667	Homo_sapiens
ENSEBUG00000016806	rbm12	89	59.477	ENSAMEG00000019189	RBM12	54	85.870	Ailuropoda_melanoleuca
ENSEBUG00000016806	rbm12	72	84.043	ENSACIG00000011053	rbm12	54	84.043	Amphilophus_citrinellus
ENSEBUG00000016806	rbm12	99	61.184	ENSACAG00000006330	RBM12	55	82.979	Anolis_carolinensis
ENSEBUG00000016806	rbm12	89	59.740	ENSBTAG00000044015	RBM12	50	85.870	Bos_taurus
ENSEBUG00000016806	rbm12	89	59.868	ENSCAFG00000008256	RBM12	52	85.870	Canis_familiaris
ENSEBUG00000016806	rbm12	89	59.868	ENSCAFG00020005650	RBM12	54	85.870	Canis_lupus_dingo
ENSEBUG00000016806	rbm12	89	59.477	ENSCHIG00000024592	RBM12	55	85.870	Capra_hircus
ENSEBUG00000016806	rbm12	89	59.477	ENSTSYG00000030563	RBM12	56	65.649	Carlito_syrichta
ENSEBUG00000016806	rbm12	87	66.412	ENSCPOG00000035170	RBM12	50	66.412	Cavia_porcellus
ENSEBUG00000016806	rbm12	84	64.885	ENSCCAG00000035899	-	55	64.885	Cebus_capucinus
ENSEBUG00000016806	rbm12	89	65.649	ENSCATG00000030934	RBM12	52	85.870	Cercocebus_atys
ENSEBUG00000016806	rbm12	89	60.390	ENSCLAG00000017230	RBM12	56	66.412	Chinchilla_lanigera
ENSEBUG00000016806	rbm12	89	65.649	ENSCANG00000030552	RBM12	54	65.649	Colobus_angolensis_palliatus
ENSEBUG00000016806	rbm12	99	72.131	ENSDARG00000100636	rbm12	58	76.106	Danio_rerio
ENSEBUG00000016806	rbm12	89	59.477	ENSECAG00000021997	RBM12	53	85.870	Equus_caballus
ENSEBUG00000016806	rbm12	92	60.784	ENSFALG00000012516	RBM12	66	60.256	Ficedula_albicollis
ENSEBUG00000016806	rbm12	89	60.131	ENSFDAG00000014663	RBM12	57	66.412	Fukomys_damarensis
ENSEBUG00000016806	rbm12	86	61.184	ENSGALG00000030253	RBM12	57	84.043	Gallus_gallus
ENSEBUG00000016806	rbm12	84	71.667	ENSGACG00000004202	rbm12	54	71.667	Gasterosteus_aculeatus
ENSEBUG00000016806	rbm12	89	65.649	ENSGGOG00000028500	RBM12	52	85.870	Gorilla_gorilla
ENSEBUG00000016806	rbm12	89	60.526	ENSHGLG00000013208	RBM12	56	66.412	Heterocephalus_glaber_female
ENSEBUG00000016806	rbm12	89	60.526	ENSHGLG00100019158	RBM12	57	66.412	Heterocephalus_glaber_male
ENSEBUG00000016806	rbm12	99	75.893	ENSIPUG00000014491	rbm12	58	76.577	Ictalurus_punctatus
ENSEBUG00000016806	rbm12	87	59.740	ENSSTOG00000019739	RBM12	50	85.870	Ictidomys_tridecemlineatus
ENSEBUG00000016806	rbm12	78	66.364	ENSJJAG00000009879	-	59	50.610	Jaculus_jaculus
ENSEBUG00000016806	rbm12	72	85.106	ENSLOCG00000018363	rbm12	55	85.106	Lepisosteus_oculatus
ENSEBUG00000016806	rbm12	89	60.784	ENSLAFG00000010341	RBM12	53	85.870	Loxodonta_africana
ENSEBUG00000016806	rbm12	89	65.649	ENSMFAG00000032583	RBM12	52	85.870	Macaca_fascicularis
ENSEBUG00000016806	rbm12	89	65.649	ENSMMUG00000020960	CPNE1	53	85.870	Macaca_mulatta
ENSEBUG00000016806	rbm12	89	65.649	ENSMNEG00000045365	RBM12	52	85.870	Macaca_nemestrina
ENSEBUG00000016806	rbm12	89	65.649	ENSMLEG00000032492	RBM12	52	85.870	Mandrillus_leucophaeus
ENSEBUG00000016806	rbm12	74	40.643	ENSMAMG00000001497	rbm12	73	38.843	Mastacembelus_armatus
ENSEBUG00000016806	rbm12	86	61.184	ENSMGAG00000001502	RBM12	57	84.043	Meleagris_gallopavo
ENSEBUG00000016806	rbm12	89	59.868	ENSMICG00000032761	-	55	65.649	Microcebus_murinus
ENSEBUG00000016806	rbm12	79	84.043	ENSMMOG00000013495	rbm12	56	76.636	Mola_mola
ENSEBUG00000016806	rbm12	87	60.784	ENSMODG00000001591	RBM12	55	84.043	Monodelphis_domestica
ENSEBUG00000016806	rbm12	73	34.727	ENSMALG00000022679	rbm12	96	30.547	Monopterus_albus
ENSEBUG00000016806	rbm12	91	59.477	ENSMPUG00000017789	-	54	85.870	Mustela_putorius_furo
ENSEBUG00000016806	rbm12	89	59.477	ENSMLUG00000011217	RBM12	57	59.740	Myotis_lucifugus
ENSEBUG00000016806	rbm12	89	65.649	ENSNLEG00000010268	RBM12	54	65.649	Nomascus_leucogenys
ENSEBUG00000016806	rbm12	87	60.784	ENSMEUG00000007621	RBM12	57	84.043	Notamacropus_eugenii
ENSEBUG00000016806	rbm12	89	83.696	ENSOPRG00000005687	RBM12	51	83.696	Ochotona_princeps
ENSEBUG00000016806	rbm12	89	60.390	ENSODEG00000013870	RBM12	51	66.412	Octodon_degus
ENSEBUG00000016806	rbm12	74	84.043	ENSOMEG00000008238	rbm12	57	84.043	Oryzias_melastigma
ENSEBUG00000016806	rbm12	89	65.649	ENSPPAG00000040719	RBM12	52	85.870	Pan_paniscus
ENSEBUG00000016806	rbm12	89	65.649	ENSPTRG00000040708	-	52	85.870	Pan_troglodytes
ENSEBUG00000016806	rbm12	89	65.649	ENSPTRG00000013446	RBM12	52	85.870	Pan_troglodytes
ENSEBUG00000016806	rbm12	89	65.649	ENSPANG00000020003	CPNE1	52	85.870	Papio_anubis
ENSEBUG00000016806	rbm12	99	61.184	ENSPSIG00000007369	RBM12	74	84.043	Pelodiscus_sinensis
ENSEBUG00000016806	rbm12	96	39.953	ENSPMGG00000018816	rbm12	96	39.953	Periophthalmus_magnuspinnatus
ENSEBUG00000016806	rbm12	99	63.571	ENSPFOG00000023551	rbm12	99	63.571	Poecilia_formosa
ENSEBUG00000016806	rbm12	89	65.649	ENSPPYG00000010960	RBM12	53	85.870	Pongo_abelii
ENSEBUG00000016806	rbm12	89	60.131	ENSPCAG00000008653	RBM12	58	60.390	Procavia_capensis
ENSEBUG00000016806	rbm12	89	59.477	ENSPCOG00000023724	RBM12	52	85.870	Propithecus_coquereli
ENSEBUG00000016806	rbm12	89	84.043	ENSPVAG00000014937	RBM12	53	85.870	Pteropus_vampyrus
ENSEBUG00000016806	rbm12	89	65.649	ENSRBIG00000042965	RBM12	52	85.870	Rhinopithecus_bieti
ENSEBUG00000016806	rbm12	89	65.649	ENSRROG00000037485	RBM12	52	85.870	Rhinopithecus_roxellana
ENSEBUG00000016806	rbm12	99	65.649	ENSSBOG00000027633	RBM12	54	65.649	Saimiri_boliviensis_boliviensis
ENSEBUG00000016806	rbm12	87	60.784	ENSSHAG00000018585	RBM12	57	84.043	Sarcophilus_harrisii
ENSEBUG00000016806	rbm12	89	59.740	ENSSSCG00000036156	RBM12	53	85.870	Sus_scrofa
ENSEBUG00000016806	rbm12	92	60.131	ENSTGUG00000003002	RBM12	60	66.412	Taeniopygia_guttata
ENSEBUG00000016806	rbm12	89	59.740	ENSTTRG00000017035	RBM12	55	85.870	Tursiops_truncatus
ENSEBUG00000016806	rbm12	89	59.477	ENSUAMG00000010430	RBM12	53	85.870	Ursus_americanus
ENSEBUG00000016806	rbm12	99	85.106	ENSXETG00000033541	RBM12	57	85.106	Xenopus_tropicalis
ENSEBUG00000016806	rbm12	87	84.043	ENSXCOG00000014073	rbm12	57	84.043	Xiphophorus_couchianus