EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSEBUG00000017057 (Gene tree)
Gene ID: -
Gene Symbol: lrrfip2 (1 of many)
Alias: si:ch211-186m12.4
Full Name: leucine rich repeat (in FLII) interacting protein 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 124393 bases
Position: chrFYBX02010305.1:1881395-2005787
Accession: ZDB-GENE-030131-7781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000027917	LRRFIP	PF09738.9	2.1e-66	1	2
ENSEBUP00000027917	LRRFIP	PF09738.9	2.1e-66	2	2
ENSEBUP00000027916	LRRFIP	PF09738.9	3.1e-66	1	2
ENSEBUP00000027916	LRRFIP	PF09738.9	3.1e-66	2	2
ENSEBUP00000027914	LRRFIP	PF09738.9	4.6e-65	1	2
ENSEBUP00000027914	LRRFIP	PF09738.9	4.6e-65	2	2
ENSEBUP00000027915	LRRFIP	PF09738.9	4.6e-65	1	2
ENSEBUP00000027915	LRRFIP	PF09738.9	4.6e-65	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000028491	-	2469	-	ENSEBUP00000027915	537 (aa)	-	-
ENSEBUT00000028490	-	1920	-	ENSEBUP00000027914	537 (aa)	-	-
ENSEBUT00000028493	-	2349	-	ENSEBUP00000027917	497 (aa)	-	-
ENSEBUT00000028492	-	2397	-	ENSEBUP00000027916	513 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000017057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000017057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000017057	lrrfip2	68	39.883	ENSEBUG00000008369	lrrfip2	98	39.608