EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000000378 (Gene tree)
Gene ID: 100051357
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 2608 bases
Position: chr3:36079379-36081986
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000000249	RRM_1	PF00076.22	3.5e-17	1	1
ENSECAP00000033508	RRM_1	PF00076.22	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000036671	PABPN1L-202	771	-	ENSECAP00000033508	256 (aa)	-	-
ENSECAT00000000322	PABPN1L-201	804	-	ENSECAP00000000249	267 (aa)	-	F7DTG6

Gene Model

Click here to download ENSECAG00000000378's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG
ecb05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000000378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000000378	PABPN1L	51	58.993	ENSECAG00000011652	PABPN1	69	46.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000000378	PABPN1L	100	70.567	ENSG00000205022	PABPN1L	100	71.631	Homo_sapiens
ENSECAG00000000378	PABPN1L	51	57.143	ENSAPOG00000000685	PABPN1L	58	50.267	Acanthochromis_polyacanthus
ENSECAG00000000378	PABPN1L	58	54.878	ENSACIG00000021400	PABPN1L	92	54.878	Amphilophus_citrinellus
ENSECAG00000000378	PABPN1L	61	51.190	ENSAOCG00000019844	PABPN1L	73	49.000	Amphiprion_ocellaris
ENSECAG00000000378	PABPN1L	61	51.190	ENSAPEG00000019534	PABPN1L	73	49.000	Amphiprion_percula
ENSECAG00000000378	PABPN1L	72	59.184	ENSACAG00000013250	PABPN1L	99	59.184	Anolis_carolinensis
ENSECAG00000000378	PABPN1L	100	67.500	ENSANAG00000038178	PABPN1L	100	68.929	Aotus_nancymaae
ENSECAG00000000378	PABPN1L	71	49.239	ENSACLG00000025147	PABPN1L	72	48.718	Astatotilapia_calliptera
ENSECAG00000000378	PABPN1L	60	52.174	ENSAMXG00000010873	PABPN1L	70	51.064	Astyanax_mexicanus
ENSECAG00000000378	PABPN1L	100	72.202	ENSBTAG00000023752	-	100	75.090	Bos_taurus
ENSECAG00000000378	PABPN1L	51	81.560	ENSBTAG00000006727	-	86	82.979	Bos_taurus
ENSECAG00000000378	PABPN1L	100	66.308	ENSCJAG00000045284	PABPN1L	100	68.571	Callithrix_jacchus
ENSECAG00000000378	PABPN1L	100	78.906	ENSCHIG00000013987	PABPN1L	93	78.906	Capra_hircus
ENSECAG00000000378	PABPN1L	96	65.799	ENSCAPG00000007240	PABPN1L	100	67.778	Cavia_aperea
ENSECAG00000000378	PABPN1L	93	68.254	ENSCPOG00000025951	PABPN1L	100	68.841	Cavia_porcellus
ENSECAG00000000378	PABPN1L	100	66.667	ENSCCAG00000027631	PABPN1L	100	68.100	Cebus_capucinus
ENSECAG00000000378	PABPN1L	100	70.144	ENSCATG00000031060	PABPN1L	100	72.401	Cercocebus_atys
ENSECAG00000000378	PABPN1L	100	68.727	ENSCLAG00000000704	PABPN1L	100	69.455	Chinchilla_lanigera
ENSECAG00000000378	PABPN1L	100	67.119	ENSCSAG00000002881	PABPN1L	100	68.475	Chlorocebus_sabaeus
ENSECAG00000000378	PABPN1L	72	57.868	ENSCPBG00000023441	PABPN1L	61	59.596	Chrysemys_picta_bellii
ENSECAG00000000378	PABPN1L	100	68.817	ENSCANG00000039336	PABPN1L	100	71.429	Colobus_angolensis_palliatus
ENSECAG00000000378	PABPN1L	100	68.705	ENSCGRG00001013211	Pabpn1l	100	68.705	Cricetulus_griseus_chok1gshd
ENSECAG00000000378	PABPN1L	100	68.705	ENSCGRG00000015868	Pabpn1l	100	68.705	Cricetulus_griseus_crigri
ENSECAG00000000378	PABPN1L	61	51.479	ENSCSEG00000001142	pabpn1l	72	49.246	Cynoglossus_semilaevis
ENSECAG00000000378	PABPN1L	100	59.928	ENSDNOG00000034677	PABPN1L	100	62.094	Dasypus_novemcinctus
ENSECAG00000000378	PABPN1L	100	97.753	ENSEASG00005000777	PABPN1L	100	97.753	Equus_asinus_asinus
ENSECAG00000000378	PABPN1L	100	61.624	ENSEEUG00000004747	PABPN1L	100	61.624	Erinaceus_europaeus
ENSECAG00000000378	PABPN1L	57	55.921	ENSELUG00000018385	PABPN1L	58	57.233	Esox_lucius
ENSECAG00000000378	PABPN1L	100	75.090	ENSFCAG00000010465	PABPN1L	100	75.812	Felis_catus
ENSECAG00000000378	PABPN1L	74	56.373	ENSFALG00000003319	PABPN1L	80	56.373	Ficedula_albicollis
ENSECAG00000000378	PABPN1L	100	68.364	ENSFDAG00000021067	PABPN1L	100	69.455	Fukomys_damarensis
ENSECAG00000000378	PABPN1L	61	51.190	ENSFHEG00000018295	PABPN1L	72	49.741	Fundulus_heteroclitus
ENSECAG00000000378	PABPN1L	54	70.000	ENSGALG00000006242	PABPN1L	85	70.000	Gallus_gallus
ENSECAG00000000378	PABPN1L	68	58.564	ENSGAGG00000010613	PABPN1L	59	58.564	Gopherus_agassizii
ENSECAG00000000378	PABPN1L	100	70.144	ENSGGOG00000012670	PABPN1L	100	72.401	Gorilla_gorilla
ENSECAG00000000378	PABPN1L	71	48.731	ENSHBUG00000002388	PABPN1L	73	50.254	Haplochromis_burtoni
ENSECAG00000000378	PABPN1L	97	69.582	ENSHGLG00000014207	PABPN1L	100	71.863	Heterocephalus_glaber_female
ENSECAG00000000378	PABPN1L	97	69.582	ENSHGLG00100005230	PABPN1L	100	71.863	Heterocephalus_glaber_male
ENSECAG00000000378	PABPN1L	58	53.548	ENSIPUG00000023583	PABPN1L	91	50.259	Ictalurus_punctatus
ENSECAG00000000378	PABPN1L	100	70.609	ENSSTOG00000020814	PABPN1L	100	70.609	Ictidomys_tridecemlineatus
ENSECAG00000000378	PABPN1L	100	68.592	ENSJJAG00000006433	Pabpn1l	100	68.592	Jaculus_jaculus
ENSECAG00000000378	PABPN1L	61	50.000	ENSLBEG00000011647	PABPN1L	60	51.724	Labrus_bergylta
ENSECAG00000000378	PABPN1L	72	67.839	ENSLAFG00000025902	-	78	67.839	Loxodonta_africana
ENSECAG00000000378	PABPN1L	100	70.144	ENSMFAG00000002924	PABPN1L	100	72.401	Macaca_fascicularis
ENSECAG00000000378	PABPN1L	100	69.314	ENSMMUG00000012438	PABPN1L	100	71.583	Macaca_mulatta
ENSECAG00000000378	PABPN1L	100	70.144	ENSMNEG00000044808	PABPN1L	100	72.401	Macaca_nemestrina
ENSECAG00000000378	PABPN1L	100	70.144	ENSMLEG00000032667	PABPN1L	100	72.401	Mandrillus_leucophaeus
ENSECAG00000000378	PABPN1L	71	49.239	ENSMZEG00005002186	PABPN1L	72	48.718	Maylandia_zebra
ENSECAG00000000378	PABPN1L	100	66.300	ENSMAUG00000014032	Pabpn1l	100	66.667	Mesocricetus_auratus
ENSECAG00000000378	PABPN1L	100	70.144	ENSMICG00000028179	PABPN1L	100	71.223	Microcebus_murinus
ENSECAG00000000378	PABPN1L	100	69.343	ENSMOCG00000007955	Pabpn1l	100	69.343	Microtus_ochrogaster
ENSECAG00000000378	PABPN1L	100	52.158	ENSMODG00000003873	-	100	53.047	Monodelphis_domestica
ENSECAG00000000378	PABPN1L	100	64.388	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.388	Mus_caroli
ENSECAG00000000378	PABPN1L	100	64.388	ENSMUSG00000069867	Pabpn1l	100	64.388	Mus_musculus
ENSECAG00000000378	PABPN1L	100	64.748	MGP_PahariEiJ_G0023268	Pabpn1l	100	64.748	Mus_pahari
ENSECAG00000000378	PABPN1L	100	64.748	MGP_SPRETEiJ_G0032788	Pabpn1l	100	64.748	Mus_spretus
ENSECAG00000000378	PABPN1L	97	57.353	ENSMLUG00000003228	PABPN1L	95	57.353	Myotis_lucifugus
ENSECAG00000000378	PABPN1L	100	70.545	ENSNGAG00000023992	Pabpn1l	100	70.545	Nannospalax_galili
ENSECAG00000000378	PABPN1L	51	58.333	ENSNBRG00000017078	PABPN1L	74	51.099	Neolamprologus_brichardi
ENSECAG00000000378	PABPN1L	100	69.314	ENSOPRG00000005597	PABPN1L	100	69.314	Ochotona_princeps
ENSECAG00000000378	PABPN1L	100	62.807	ENSODEG00000004649	PABPN1L	100	62.807	Octodon_degus
ENSECAG00000000378	PABPN1L	100	56.985	ENSOANG00000013901	PABPN1L	100	57.348	Ornithorhynchus_anatinus
ENSECAG00000000378	PABPN1L	72	52.332	ENSORLG00000026560	PABPN1L	71	52.332	Oryzias_latipes
ENSECAG00000000378	PABPN1L	72	52.332	ENSORLG00020015068	PABPN1L	71	52.332	Oryzias_latipes_hni
ENSECAG00000000378	PABPN1L	72	52.332	ENSORLG00015000397	PABPN1L	71	52.332	Oryzias_latipes_hsok
ENSECAG00000000378	PABPN1L	72	50.251	ENSOMEG00000017896	PABPN1L	51	50.251	Oryzias_melastigma
ENSECAG00000000378	PABPN1L	100	71.480	ENSOGAG00000000433	PABPN1L	100	72.202	Otolemur_garnettii
ENSECAG00000000378	PABPN1L	100	69.536	ENSOARG00000013682	PABPN1L	100	72.517	Ovis_aries
ENSECAG00000000378	PABPN1L	100	70.922	ENSPPAG00000028866	PABPN1L	100	71.986	Pan_paniscus
ENSECAG00000000378	PABPN1L	100	74.368	ENSPPRG00000015106	PABPN1L	100	75.090	Panthera_pardus
ENSECAG00000000378	PABPN1L	94	67.442	ENSPTIG00000015606	PABPN1L	100	67.442	Panthera_tigris_altaica
ENSECAG00000000378	PABPN1L	100	70.922	ENSPTRG00000031120	PABPN1L	100	71.986	Pan_troglodytes
ENSECAG00000000378	PABPN1L	100	70.144	ENSPANG00000026039	PABPN1L	100	72.401	Papio_anubis
ENSECAG00000000378	PABPN1L	71	55.122	ENSPSIG00000003404	PABPN1L	100	55.122	Pelodiscus_sinensis
ENSECAG00000000378	PABPN1L	100	68.498	ENSPEMG00000016624	Pabpn1l	100	68.498	Peromyscus_maniculatus_bairdii
ENSECAG00000000378	PABPN1L	52	66.667	ENSPCIG00000007038	-	100	66.667	Phascolarctos_cinereus
ENSECAG00000000378	PABPN1L	100	69.039	ENSPPYG00000007655	PABPN1L	100	71.277	Pongo_abelii
ENSECAG00000000378	PABPN1L	100	71.942	ENSPCOG00000024077	PABPN1L	100	73.381	Propithecus_coquereli
ENSECAG00000000378	PABPN1L	100	75.357	ENSPVAG00000002716	PABPN1L	100	75.714	Pteropus_vampyrus
ENSECAG00000000378	PABPN1L	71	49.239	ENSPNYG00000004803	PABPN1L	72	48.718	Pundamilia_nyererei
ENSECAG00000000378	PABPN1L	100	67.518	ENSRNOG00000029558	Pabpn1l	100	68.248	Rattus_norvegicus
ENSECAG00000000378	PABPN1L	100	71.223	ENSRBIG00000030740	PABPN1L	100	73.477	Rhinopithecus_bieti
ENSECAG00000000378	PABPN1L	100	71.326	ENSRROG00000032240	-	100	72.760	Rhinopithecus_roxellana
ENSECAG00000000378	PABPN1L	99	69.675	ENSRROG00000035483	-	99	71.942	Rhinopithecus_roxellana
ENSECAG00000000378	PABPN1L	100	67.266	ENSSBOG00000018410	PABPN1L	100	68.705	Saimiri_boliviensis_boliviensis
ENSECAG00000000378	PABPN1L	100	51.379	ENSSHAG00000010001	-	100	51.724	Sarcophilus_harrisii
ENSECAG00000000378	PABPN1L	96	53.725	ENSSARG00000005178	-	99	53.725	Sorex_araneus
ENSECAG00000000378	PABPN1L	71	60.406	ENSSPUG00000007031	PABPN1L	84	60.606	Sphenodon_punctatus
ENSECAG00000000378	PABPN1L	71	50.000	ENSSPAG00000017978	PABPN1L	73	49.500	Stegastes_partitus
ENSECAG00000000378	PABPN1L	100	73.626	ENSSSCG00000036367	PABPN1L	100	75.824	Sus_scrofa
ENSECAG00000000378	PABPN1L	61	52.147	ENSTRUG00000024725	PABPN1L	81	49.744	Takifugu_rubripes
ENSECAG00000000378	PABPN1L	100	75.090	ENSTTRG00000004691	PABPN1L	100	76.173	Tursiops_truncatus
ENSECAG00000000378	PABPN1L	58	51.515	ENSXETG00000011258	pabpn1l	96	49.315	Xenopus_tropicalis