EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000000557 (Gene tree)
Gene ID: 100072435
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 8405 bases
Position: chr7:36194338-36202742
Accession: 22574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000000358	PseudoU_synth_2	PF00849.22	4.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000000458	-	1486	-	ENSECAP00000000358	377 (aa)	XP_001502415	F7CYV6

Gene Model

Click here to download ENSECAG00000000557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000000557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000000557	RPUSD4	71	31.707	ENSECAG00000019988	RPUSD3	76	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000000557	RPUSD4	100	81.963	ENSG00000165526	RPUSD4	100	81.963	Homo_sapiens
ENSECAG00000000557	RPUSD4	86	51.829	ENSAPOG00000011024	rpusd4	82	51.829	Acanthochromis_polyacanthus
ENSECAG00000000557	RPUSD4	100	85.146	ENSAMEG00000000127	-	100	85.146	Ailuropoda_melanoleuca
ENSECAG00000000557	RPUSD4	83	78.873	ENSAMEG00000005953	-	100	78.873	Ailuropoda_melanoleuca
ENSECAG00000000557	RPUSD4	89	48.094	ENSACIG00000003533	rpusd4	98	48.094	Amphilophus_citrinellus
ENSECAG00000000557	RPUSD4	90	50.291	ENSAOCG00000015409	rpusd4	85	50.291	Amphiprion_ocellaris
ENSECAG00000000557	RPUSD4	90	50.581	ENSAPEG00000018935	rpusd4	85	50.581	Amphiprion_percula
ENSECAG00000000557	RPUSD4	82	52.381	ENSATEG00000008059	rpusd4	78	52.381	Anabas_testudineus
ENSECAG00000000557	RPUSD4	73	59.140	ENSAPLG00000013250	RPUSD4	99	57.966	Anas_platyrhynchos
ENSECAG00000000557	RPUSD4	97	56.948	ENSACAG00000000189	RPUSD4	99	56.948	Anolis_carolinensis
ENSECAG00000000557	RPUSD4	98	81.402	ENSANAG00000024050	RPUSD4	99	81.402	Aotus_nancymaae
ENSECAG00000000557	RPUSD4	85	52.147	ENSACLG00000020996	rpusd4	83	52.147	Astatotilapia_calliptera
ENSECAG00000000557	RPUSD4	88	51.335	ENSAMXG00000031479	rpusd4	95	51.335	Astyanax_mexicanus
ENSECAG00000000557	RPUSD4	100	82.011	ENSBTAG00000020900	RPUSD4	100	82.011	Bos_taurus
ENSECAG00000000557	RPUSD4	98	81.351	ENSCJAG00000042850	RPUSD4	93	81.351	Callithrix_jacchus
ENSECAG00000000557	RPUSD4	100	84.127	ENSCAFG00000010488	RPUSD4	100	84.127	Canis_familiaris
ENSECAG00000000557	RPUSD4	100	84.127	ENSCAFG00020010621	RPUSD4	100	84.127	Canis_lupus_dingo
ENSECAG00000000557	RPUSD4	100	83.113	ENSCHIG00000009975	RPUSD4	100	83.113	Capra_hircus
ENSECAG00000000557	RPUSD4	100	86.207	ENSTSYG00000008456	RPUSD4	100	86.207	Carlito_syrichta
ENSECAG00000000557	RPUSD4	68	80.620	ENSCAPG00000006040	RPUSD4	100	80.620	Cavia_aperea
ENSECAG00000000557	RPUSD4	100	81.698	ENSCPOG00000014971	RPUSD4	100	81.698	Cavia_porcellus
ENSECAG00000000557	RPUSD4	98	81.941	ENSCCAG00000027838	RPUSD4	99	81.941	Cebus_capucinus
ENSECAG00000000557	RPUSD4	100	81.963	ENSCATG00000041570	RPUSD4	100	81.963	Cercocebus_atys
ENSECAG00000000557	RPUSD4	100	83.820	ENSCLAG00000016553	RPUSD4	100	83.820	Chinchilla_lanigera
ENSECAG00000000557	RPUSD4	100	81.698	ENSCSAG00000002274	RPUSD4	100	81.698	Chlorocebus_sabaeus
ENSECAG00000000557	RPUSD4	75	84.452	ENSCHOG00000010249	RPUSD4	100	84.452	Choloepus_hoffmanni
ENSECAG00000000557	RPUSD4	75	66.084	ENSCPBG00000011175	RPUSD4	99	66.084	Chrysemys_picta_bellii
ENSECAG00000000557	RPUSD4	71	42.446	ENSCSAVG00000000872	-	54	42.446	Ciona_savignyi
ENSECAG00000000557	RPUSD4	100	80.371	ENSCANG00000039684	RPUSD4	100	80.371	Colobus_angolensis_palliatus
ENSECAG00000000557	RPUSD4	100	81.432	ENSCGRG00001024141	Rpusd4	100	81.432	Cricetulus_griseus_chok1gshd
ENSECAG00000000557	RPUSD4	100	81.432	ENSCGRG00000014415	Rpusd4	100	81.432	Cricetulus_griseus_crigri
ENSECAG00000000557	RPUSD4	89	49.857	ENSCVAG00000000392	rpusd4	99	49.857	Cyprinodon_variegatus
ENSECAG00000000557	RPUSD4	88	50.445	ENSCVAG00000008761	rpusd4	86	50.445	Cyprinodon_variegatus
ENSECAG00000000557	RPUSD4	85	51.385	ENSDARG00000012674	rpusd4	91	51.385	Danio_rerio
ENSECAG00000000557	RPUSD4	100	81.167	ENSDNOG00000020026	RPUSD4	100	81.167	Dasypus_novemcinctus
ENSECAG00000000557	RPUSD4	100	82.493	ENSDORG00000016717	Rpusd4	100	82.493	Dipodomys_ordii
ENSECAG00000000557	RPUSD4	99	82.888	ENSETEG00000013953	RPUSD4	99	82.888	Echinops_telfairi
ENSECAG00000000557	RPUSD4	100	98.408	ENSEASG00005022982	RPUSD4	100	98.408	Equus_asinus_asinus
ENSECAG00000000557	RPUSD4	81	82.258	ENSEEUG00000014036	RPUSD4	81	82.258	Erinaceus_europaeus
ENSECAG00000000557	RPUSD4	93	52.446	ENSELUG00000008075	rpusd4	95	52.446	Esox_lucius
ENSECAG00000000557	RPUSD4	100	84.350	ENSFCAG00000029789	RPUSD4	100	84.350	Felis_catus
ENSECAG00000000557	RPUSD4	86	57.798	ENSFALG00000005171	RPUSD4	96	57.798	Ficedula_albicollis
ENSECAG00000000557	RPUSD4	100	82.493	ENSFDAG00000014307	RPUSD4	100	82.493	Fukomys_damarensis
ENSECAG00000000557	RPUSD4	88	51.039	ENSFHEG00000004329	rpusd4	86	51.039	Fundulus_heteroclitus
ENSECAG00000000557	RPUSD4	85	51.227	ENSGMOG00000017726	rpusd4	99	50.442	Gadus_morhua
ENSECAG00000000557	RPUSD4	94	55.125	ENSGALG00000024326	RPUSD4	98	56.164	Gallus_gallus
ENSECAG00000000557	RPUSD4	91	46.875	ENSGAFG00000021559	rpusd4	89	46.875	Gambusia_affinis
ENSECAG00000000557	RPUSD4	88	49.853	ENSGACG00000001657	rpusd4	100	50.347	Gasterosteus_aculeatus
ENSECAG00000000557	RPUSD4	92	60.458	ENSGAGG00000000132	RPUSD4	96	60.458	Gopherus_agassizii
ENSECAG00000000557	RPUSD4	100	82.493	ENSGGOG00000016494	RPUSD4	100	82.493	Gorilla_gorilla
ENSECAG00000000557	RPUSD4	85	52.147	ENSHBUG00000022838	rpusd4	83	52.147	Haplochromis_burtoni
ENSECAG00000000557	RPUSD4	100	83.289	ENSHGLG00000002285	RPUSD4	100	83.289	Heterocephalus_glaber_female
ENSECAG00000000557	RPUSD4	100	83.289	ENSHGLG00100006385	RPUSD4	100	83.289	Heterocephalus_glaber_male
ENSECAG00000000557	RPUSD4	86	50.915	ENSHCOG00000006612	rpusd4	83	50.915	Hippocampus_comes
ENSECAG00000000557	RPUSD4	92	52.149	ENSIPUG00000023879	rusd4	89	52.149	Ictalurus_punctatus
ENSECAG00000000557	RPUSD4	97	85.165	ENSSTOG00000025280	RPUSD4	100	85.165	Ictidomys_tridecemlineatus
ENSECAG00000000557	RPUSD4	98	84.367	ENSJJAG00000018673	Rpusd4	99	84.367	Jaculus_jaculus
ENSECAG00000000557	RPUSD4	89	51.471	ENSKMAG00000021805	rpusd4	88	51.471	Kryptolebias_marmoratus
ENSECAG00000000557	RPUSD4	93	48.876	ENSLBEG00000020394	rpusd4	99	48.876	Labrus_bergylta
ENSECAG00000000557	RPUSD4	85	61.350	ENSLACG00000011028	RPUSD4	85	60.177	Latimeria_chalumnae
ENSECAG00000000557	RPUSD4	85	48.457	ENSLOCG00000003124	rpusd4	86	48.457	Lepisosteus_oculatus
ENSECAG00000000557	RPUSD4	100	83.598	ENSLAFG00000005211	RPUSD4	100	83.598	Loxodonta_africana
ENSECAG00000000557	RPUSD4	100	81.963	ENSMFAG00000039513	RPUSD4	100	81.963	Macaca_fascicularis
ENSECAG00000000557	RPUSD4	100	81.698	ENSMMUG00000007933	RPUSD4	100	81.698	Macaca_mulatta
ENSECAG00000000557	RPUSD4	100	81.698	ENSMNEG00000027414	RPUSD4	100	81.698	Macaca_nemestrina
ENSECAG00000000557	RPUSD4	100	81.432	ENSMLEG00000042461	RPUSD4	100	81.432	Mandrillus_leucophaeus
ENSECAG00000000557	RPUSD4	88	49.704	ENSMAMG00000023839	rpusd4	86	49.704	Mastacembelus_armatus
ENSECAG00000000557	RPUSD4	85	52.147	ENSMZEG00005011999	rpusd4	83	52.147	Maylandia_zebra
ENSECAG00000000557	RPUSD4	74	60.714	ENSMGAG00000000840	RPUSD4	99	58.333	Meleagris_gallopavo
ENSECAG00000000557	RPUSD4	100	79.576	ENSMAUG00000010280	Rpusd4	100	79.576	Mesocricetus_auratus
ENSECAG00000000557	RPUSD4	100	85.146	ENSMICG00000015979	RPUSD4	100	85.146	Microcebus_murinus
ENSECAG00000000557	RPUSD4	100	77.984	ENSMOCG00000000661	Rpusd4	100	77.984	Microtus_ochrogaster
ENSECAG00000000557	RPUSD4	81	54.662	ENSMMOG00000021731	rpusd4	92	54.662	Mola_mola
ENSECAG00000000557	RPUSD4	92	72.622	ENSMODG00000004521	RPUSD4	89	72.622	Monodelphis_domestica
ENSECAG00000000557	RPUSD4	79	53.289	ENSMALG00000005839	rpusd4	96	51.875	Monopterus_albus
ENSECAG00000000557	RPUSD4	100	79.310	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.310	Mus_caroli
ENSECAG00000000557	RPUSD4	100	79.310	ENSMUSG00000032044	Rpusd4	100	79.310	Mus_musculus
ENSECAG00000000557	RPUSD4	100	80.637	MGP_PahariEiJ_G0014819	Rpusd4	100	80.637	Mus_pahari
ENSECAG00000000557	RPUSD4	100	79.045	MGP_SPRETEiJ_G0033078	Rpusd4	100	79.045	Mus_spretus
ENSECAG00000000557	RPUSD4	99	81.600	ENSMPUG00000006608	RPUSD4	99	81.600	Mustela_putorius_furo
ENSECAG00000000557	RPUSD4	67	87.402	ENSMLUG00000029348	-	100	87.402	Myotis_lucifugus
ENSECAG00000000557	RPUSD4	91	87.172	ENSMLUG00000017328	-	97	84.741	Myotis_lucifugus
ENSECAG00000000557	RPUSD4	99	82.258	ENSNGAG00000020847	Rpusd4	99	82.258	Nannospalax_galili
ENSECAG00000000557	RPUSD4	85	52.454	ENSNBRG00000005207	rpusd4	94	52.454	Neolamprologus_brichardi
ENSECAG00000000557	RPUSD4	100	82.493	ENSNLEG00000007465	RPUSD4	100	82.493	Nomascus_leucogenys
ENSECAG00000000557	RPUSD4	98	69.648	ENSMEUG00000004370	RPUSD4	99	69.648	Notamacropus_eugenii
ENSECAG00000000557	RPUSD4	70	62.264	ENSOPRG00000013141	-	100	62.264	Ochotona_princeps
ENSECAG00000000557	RPUSD4	100	81.963	ENSODEG00000004577	RPUSD4	100	81.963	Octodon_degus
ENSECAG00000000557	RPUSD4	86	51.829	ENSONIG00000018879	rpusd4	88	51.829	Oreochromis_niloticus
ENSECAG00000000557	RPUSD4	77	66.780	ENSOANG00000007247	RPUSD4	97	65.677	Ornithorhynchus_anatinus
ENSECAG00000000557	RPUSD4	99	82.353	ENSOCUG00000017039	RPUSD4	99	82.353	Oryctolagus_cuniculus
ENSECAG00000000557	RPUSD4	86	51.368	ENSORLG00000002750	rpusd4	87	51.713	Oryzias_latipes
ENSECAG00000000557	RPUSD4	77	54.082	ENSORLG00020002044	rpusd4	73	54.082	Oryzias_latipes_hni
ENSECAG00000000557	RPUSD4	85	51.077	ENSORLG00015020034	rpusd4	81	51.077	Oryzias_latipes_hsok
ENSECAG00000000557	RPUSD4	84	53.251	ENSOMEG00000004861	rpusd4	79	53.251	Oryzias_melastigma
ENSECAG00000000557	RPUSD4	100	82.275	ENSOGAG00000008922	RPUSD4	100	82.275	Otolemur_garnettii
ENSECAG00000000557	RPUSD4	98	83.243	ENSOARG00000012238	RPUSD4	99	82.804	Ovis_aries
ENSECAG00000000557	RPUSD4	100	82.228	ENSPPAG00000042883	RPUSD4	93	82.228	Pan_paniscus
ENSECAG00000000557	RPUSD4	100	84.085	ENSPPRG00000003081	RPUSD4	100	84.085	Panthera_pardus
ENSECAG00000000557	RPUSD4	100	84.085	ENSPTIG00000012059	RPUSD4	100	84.085	Panthera_tigris_altaica
ENSECAG00000000557	RPUSD4	100	81.963	ENSPTRG00000004454	RPUSD4	100	81.963	Pan_troglodytes
ENSECAG00000000557	RPUSD4	100	81.698	ENSPANG00000015040	RPUSD4	100	81.698	Papio_anubis
ENSECAG00000000557	RPUSD4	89	57.101	ENSPKIG00000023986	rpusd4	86	57.101	Paramormyrops_kingsleyae
ENSECAG00000000557	RPUSD4	79	65.333	ENSPSIG00000014268	RPUSD4	95	65.333	Pelodiscus_sinensis
ENSECAG00000000557	RPUSD4	86	49.848	ENSPMGG00000002806	rpusd4	91	49.695	Periophthalmus_magnuspinnatus
ENSECAG00000000557	RPUSD4	100	73.740	ENSPEMG00000000278	Rpusd4	100	73.740	Peromyscus_maniculatus_bairdii
ENSECAG00000000557	RPUSD4	80	46.108	ENSPMAG00000008183	rpusd4	97	46.108	Petromyzon_marinus
ENSECAG00000000557	RPUSD4	97	72.253	ENSPCIG00000010212	RPUSD4	100	72.253	Phascolarctos_cinereus
ENSECAG00000000557	RPUSD4	90	48.580	ENSPFOG00000019030	rpusd4	91	48.580	Poecilia_formosa
ENSECAG00000000557	RPUSD4	90	49.143	ENSPLAG00000016848	rpusd4	88	49.143	Poecilia_latipinna
ENSECAG00000000557	RPUSD4	90	48.000	ENSPMEG00000017534	rpusd4	88	48.000	Poecilia_mexicana
ENSECAG00000000557	RPUSD4	86	48.961	ENSPREG00000005689	rpusd4	87	48.961	Poecilia_reticulata
ENSECAG00000000557	RPUSD4	100	83.554	ENSPPYG00000004043	RPUSD4	100	83.554	Pongo_abelii
ENSECAG00000000557	RPUSD4	80	80.978	ENSPCAG00000000753	RPUSD4	81	80.978	Procavia_capensis
ENSECAG00000000557	RPUSD4	98	79.515	ENSPCOG00000020694	RPUSD4	100	79.515	Propithecus_coquereli
ENSECAG00000000557	RPUSD4	100	85.411	ENSPVAG00000000988	RPUSD4	100	85.411	Pteropus_vampyrus
ENSECAG00000000557	RPUSD4	85	50.920	ENSPNYG00000009652	rpusd4	83	50.920	Pundamilia_nyererei
ENSECAG00000000557	RPUSD4	96	50.411	ENSPNAG00000012264	rpusd4	95	50.411	Pygocentrus_nattereri
ENSECAG00000000557	RPUSD4	100	80.371	ENSRNOG00000011567	Rpusd4	100	80.371	Rattus_norvegicus
ENSECAG00000000557	RPUSD4	100	81.963	ENSRBIG00000034842	RPUSD4	100	81.963	Rhinopithecus_bieti
ENSECAG00000000557	RPUSD4	100	81.963	ENSRROG00000039753	RPUSD4	100	81.963	Rhinopithecus_roxellana
ENSECAG00000000557	RPUSD4	98	80.863	ENSSBOG00000030413	RPUSD4	99	80.863	Saimiri_boliviensis_boliviensis
ENSECAG00000000557	RPUSD4	80	75.748	ENSSHAG00000008304	RPUSD4	99	75.748	Sarcophilus_harrisii
ENSECAG00000000557	RPUSD4	86	56.928	ENSSFOG00015006203	rpusd4	90	56.928	Scleropages_formosus
ENSECAG00000000557	RPUSD4	88	50.893	ENSSMAG00000020978	rpusd4	87	51.368	Scophthalmus_maximus
ENSECAG00000000557	RPUSD4	89	50.000	ENSSDUG00000013399	rpusd4	87	50.000	Seriola_dumerili
ENSECAG00000000557	RPUSD4	85	50.459	ENSSLDG00000023507	rpusd4	86	50.459	Seriola_lalandi_dorsalis
ENSECAG00000000557	RPUSD4	88	62.500	ENSSPUG00000001401	RPUSD4	92	63.095	Sphenodon_punctatus
ENSECAG00000000557	RPUSD4	90	52.035	ENSSPAG00000012163	rpusd4	88	52.035	Stegastes_partitus
ENSECAG00000000557	RPUSD4	100	85.942	ENSSSCG00000015233	RPUSD4	100	85.942	Sus_scrofa
ENSECAG00000000557	RPUSD4	79	59.000	ENSTGUG00000000773	RPUSD4	100	59.000	Taeniopygia_guttata
ENSECAG00000000557	RPUSD4	86	50.760	ENSTRUG00000012283	rpusd4	84	50.760	Takifugu_rubripes
ENSECAG00000000557	RPUSD4	90	49.143	ENSTNIG00000014676	rpusd4	89	49.143	Tetraodon_nigroviridis
ENSECAG00000000557	RPUSD4	100	84.085	ENSTTRG00000001555	RPUSD4	100	84.085	Tursiops_truncatus
ENSECAG00000000557	RPUSD4	100	84.615	ENSUMAG00000002219	RPUSD4	100	84.615	Ursus_maritimus
ENSECAG00000000557	RPUSD4	70	85.660	ENSVPAG00000001066	RPUSD4	100	85.660	Vicugna_pacos
ENSECAG00000000557	RPUSD4	100	83.598	ENSVVUG00000020101	RPUSD4	100	83.598	Vulpes_vulpes
ENSECAG00000000557	RPUSD4	91	48.295	ENSXCOG00000004676	rpusd4	91	48.011	Xiphophorus_couchianus
ENSECAG00000000557	RPUSD4	91	48.295	ENSXMAG00000023351	rpusd4	89	48.295	Xiphophorus_maculatus