EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000000712 (Gene tree)
Gene ID: 100052429
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 6096 bases
Position: chr24:22912574-22918669
Accession: 52441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000000444	RRM_1	PF00076.22	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000000568	-	336	-	ENSECAP00000000444	111 (aa)	XP_001494001	F7C6N9

Gene Model

Click here to download ENSECAG00000000712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000000712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000000712	SLIRP	92	80.392	ENSBTAG00000050457	-	100	80.392	Bos_taurus
ENSECAG00000000712	SLIRP	90	92.000	ENSBTAG00000008135	SLIRP	100	91.892	Bos_taurus
ENSECAG00000000712	SLIRP	90	86.000	ENSCAFG00000017230	SLIRP	100	86.486	Canis_familiaris
ENSECAG00000000712	SLIRP	90	86.000	ENSCAFG00020000852	-	100	86.486	Canis_lupus_dingo
ENSECAG00000000712	SLIRP	100	82.883	ENSCHIG00000002964	-	100	82.883	Capra_hircus
ENSECAG00000000712	SLIRP	100	88.288	ENSCHIG00000019077	-	100	88.288	Capra_hircus
ENSECAG00000000712	SLIRP	100	81.982	ENSCPOG00000001500	-	100	81.982	Cavia_porcellus
ENSECAG00000000712	SLIRP	100	79.279	ENSCLAG00000008545	-	100	79.279	Chinchilla_lanigera
ENSECAG00000000712	SLIRP	80	67.416	ENSDNOG00000041397	-	81	67.416	Dasypus_novemcinctus
ENSECAG00000000712	SLIRP	89	83.838	ENSJJAG00000018723	-	100	81.982	Jaculus_jaculus
ENSECAG00000000712	SLIRP	100	79.279	MGP_PahariEiJ_G0029754	-	100	79.279	Mus_pahari
ENSECAG00000000712	SLIRP	90	85.000	ENSMLUG00000022403	-	100	83.784	Myotis_lucifugus
ENSECAG00000000712	SLIRP	100	82.883	ENSOPRG00000007560	-	100	82.883	Ochotona_princeps
ENSECAG00000000712	SLIRP	100	90.991	ENSOCUG00000009713	-	100	90.991	Oryctolagus_cuniculus
ENSECAG00000000712	SLIRP	90	71.000	ENSOGAG00000027580	-	99	70.270	Otolemur_garnettii
ENSECAG00000000712	SLIRP	100	73.874	ENSOARG00000016139	-	100	73.874	Ovis_aries
ENSECAG00000000712	SLIRP	90	88.000	ENSOARG00000002642	SLIRP	100	87.387	Ovis_aries
ENSECAG00000000712	SLIRP	86	65.625	ENSPCAG00000004290	-	100	66.667	Procavia_capensis
ENSECAG00000000712	SLIRP	70	85.897	ENSPVAG00000006420	-	70	85.897	Pteropus_vampyrus
ENSECAG00000000712	SLIRP	100	80.180	ENSRNOG00000012314	Slirp	100	80.180	Rattus_norvegicus
ENSECAG00000000712	SLIRP	100	84.685	ENSTBEG00000013979	-	100	84.685	Tupaia_belangeri
ENSECAG00000000712	SLIRP	70	91.026	ENSTTRG00000009328	-	100	74.775	Tursiops_truncatus