EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000001088 (Gene tree)
Gene ID: 100071865
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 130233 bases
Position: chr2:101148466-101278698
Accession: 100071865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000001090	La	PF05383.17	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000001421	LARP1B-201	3434	-	ENSECAP00000001090	1106 (aa)	XP_014593448	F6UA15

Gene Model

Click here to download ENSECAG00000001088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000001088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000001088	LARP1B	87	58.583	ENSECAG00000017002	LARP1	71	57.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000001088	LARP1B	99	86.494	ENSG00000138709	LARP1B	96	100.000	Homo_sapiens
ENSECAG00000001088	LARP1B	84	56.718	ENSAPOG00000020101	larp1b	90	55.800	Acanthochromis_polyacanthus
ENSECAG00000001088	LARP1B	50	93.636	ENSAMEG00000002748	LARP1B	98	95.441	Ailuropoda_melanoleuca
ENSECAG00000001088	LARP1B	84	54.184	ENSACIG00000023890	larp1b	85	54.787	Amphilophus_citrinellus
ENSECAG00000001088	LARP1B	77	55.057	ENSAOCG00000014268	larp1b	85	57.442	Amphiprion_ocellaris
ENSECAG00000001088	LARP1B	88	55.124	ENSAPEG00000004126	larp1b	90	55.968	Amphiprion_percula
ENSECAG00000001088	LARP1B	89	54.429	ENSATEG00000017849	larp1b	92	54.413	Anabas_testudineus
ENSECAG00000001088	LARP1B	80	68.484	ENSAPLG00000010129	LARP1B	100	68.559	Anas_platyrhynchos
ENSECAG00000001088	LARP1B	81	74.754	ENSACAG00000011338	LARP1B	93	75.000	Anolis_carolinensis
ENSECAG00000001088	LARP1B	81	70.403	ENSANAG00000034618	LARP1B	96	80.363	Aotus_nancymaae
ENSECAG00000001088	LARP1B	84	56.050	ENSACLG00000011948	larp1b	90	54.790	Astatotilapia_calliptera
ENSECAG00000001088	LARP1B	85	51.120	ENSAMXG00000006805	larp1b	86	52.266	Astyanax_mexicanus
ENSECAG00000001088	LARP1B	100	89.148	ENSBTAG00000012135	LARP1B	99	90.909	Bos_taurus
ENSECAG00000001088	LARP1B	81	88.926	ENSCJAG00000003338	LARP1B	98	93.009	Callithrix_jacchus
ENSECAG00000001088	LARP1B	82	92.818	ENSCAFG00000003831	LARP1B	100	92.818	Canis_familiaris
ENSECAG00000001088	LARP1B	82	91.622	ENSCAFG00020018899	LARP1B	98	96.657	Canis_lupus_dingo
ENSECAG00000001088	LARP1B	82	89.559	ENSCHIG00000023144	LARP1B	98	93.030	Capra_hircus
ENSECAG00000001088	LARP1B	81	88.415	ENSCCAG00000021948	LARP1B	98	93.617	Cebus_capucinus
ENSECAG00000001088	LARP1B	81	88.074	ENSCATG00000013541	LARP1B	100	88.074	Cercocebus_atys
ENSECAG00000001088	LARP1B	81	88.877	ENSCSAG00000003582	LARP1B	100	88.877	Chlorocebus_sabaeus
ENSECAG00000001088	LARP1B	81	80.916	ENSCHOG00000005354	LARP1B	100	80.916	Choloepus_hoffmanni
ENSECAG00000001088	LARP1B	91	73.111	ENSCPBG00000017480	LARP1B	93	75.102	Chrysemys_picta_bellii
ENSECAG00000001088	LARP1B	81	84.792	ENSCANG00000026958	LARP1B	100	84.792	Colobus_angolensis_palliatus
ENSECAG00000001088	LARP1B	84	52.959	ENSCSEG00000013519	larp1b	87	53.963	Cynoglossus_semilaevis
ENSECAG00000001088	LARP1B	84	55.260	ENSCVAG00000005046	larp1b	90	54.990	Cyprinodon_variegatus
ENSECAG00000001088	LARP1B	90	51.547	ENSDARG00000061169	larp1b	88	52.500	Danio_rerio
ENSECAG00000001088	LARP1B	72	82.353	ENSETEG00000012497	LARP1B	89	82.353	Echinops_telfairi
ENSECAG00000001088	LARP1B	84	50.252	ENSEBUG00000003668	larp1b	90	52.299	Eptatretus_burgeri
ENSECAG00000001088	LARP1B	82	98.268	ENSEASG00005018106	LARP1B	100	98.268	Equus_asinus_asinus
ENSECAG00000001088	LARP1B	55	56.082	ENSELUG00000023774	larp1b	86	45.649	Esox_lucius
ENSECAG00000001088	LARP1B	82	67.559	ENSFALG00000008098	LARP1B	100	67.666	Ficedula_albicollis
ENSECAG00000001088	LARP1B	87	56.008	ENSFHEG00000010264	larp1b	86	55.489	Fundulus_heteroclitus
ENSECAG00000001088	LARP1B	85	54.722	ENSGMOG00000005207	larp1b	81	54.709	Gadus_morhua
ENSECAG00000001088	LARP1B	88	67.109	ENSGALG00000010207	LARP1B	97	65.810	Gallus_gallus
ENSECAG00000001088	LARP1B	77	58.656	ENSGAFG00000012012	larp1b	98	58.983	Gambusia_affinis
ENSECAG00000001088	LARP1B	88	50.893	ENSGACG00000004609	larp1b	87	54.330	Gasterosteus_aculeatus
ENSECAG00000001088	LARP1B	91	73.235	ENSGAGG00000017209	LARP1B	92	75.512	Gopherus_agassizii
ENSECAG00000001088	LARP1B	81	89.180	ENSGGOG00000015900	LARP1B	98	92.705	Gorilla_gorilla
ENSECAG00000001088	LARP1B	84	56.166	ENSHBUG00000009730	larp1b	89	54.900	Haplochromis_burtoni
ENSECAG00000001088	LARP1B	63	59.831	ENSHCOG00000000918	larp1b	99	60.534	Hippocampus_comes
ENSECAG00000001088	LARP1B	85	54.610	ENSIPUG00000012138	larp1b	86	54.774	Ictalurus_punctatus
ENSECAG00000001088	LARP1B	84	53.782	ENSKMAG00000011589	larp1b	91	53.754	Kryptolebias_marmoratus
ENSECAG00000001088	LARP1B	84	56.078	ENSLBEG00000005655	larp1b	90	56.100	Labrus_bergylta
ENSECAG00000001088	LARP1B	85	72.004	ENSLACG00000015247	LARP1B	100	70.229	Latimeria_chalumnae
ENSECAG00000001088	LARP1B	81	65.569	ENSLOCG00000010684	larp1b	95	66.425	Lepisosteus_oculatus
ENSECAG00000001088	LARP1B	81	89.606	ENSMFAG00000002218	LARP1B	98	93.313	Macaca_fascicularis
ENSECAG00000001088	LARP1B	81	89.716	ENSMMUG00000021347	LARP1B	98	93.313	Macaca_mulatta
ENSECAG00000001088	LARP1B	74	88.333	ENSMNEG00000030406	LARP1B	100	88.333	Macaca_nemestrina
ENSECAG00000001088	LARP1B	81	85.886	ENSMLEG00000009306	LARP1B	100	85.886	Mandrillus_leucophaeus
ENSECAG00000001088	LARP1B	87	55.271	ENSMAMG00000000081	larp1b	90	55.556	Mastacembelus_armatus
ENSECAG00000001088	LARP1B	62	63.358	ENSMZEG00005002545	larp1b	98	59.872	Maylandia_zebra
ENSECAG00000001088	LARP1B	79	63.377	ENSMGAG00000004809	LARP1B	100	62.610	Meleagris_gallopavo
ENSECAG00000001088	LARP1B	81	92.699	ENSMICG00000036111	LARP1B	98	95.137	Microcebus_murinus
ENSECAG00000001088	LARP1B	97	76.855	ENSMODG00000012300	LARP1B	97	78.771	Monodelphis_domestica
ENSECAG00000001088	LARP1B	84	55.624	ENSMALG00000003638	larp1b	87	56.360	Monopterus_albus
ENSECAG00000001088	LARP1B	100	90.117	ENSMPUG00000017365	LARP1B	100	90.296	Mustela_putorius_furo
ENSECAG00000001088	LARP1B	81	86.378	ENSMLUG00000010229	LARP1B	100	86.378	Myotis_lucifugus
ENSECAG00000001088	LARP1B	68	58.333	ENSNBRG00000023846	larp1b	87	55.654	Neolamprologus_brichardi
ENSECAG00000001088	LARP1B	81	88.210	ENSNLEG00000013819	LARP1B	98	92.401	Nomascus_leucogenys
ENSECAG00000001088	LARP1B	70	80.952	ENSMEUG00000010308	LARP1B	88	80.952	Notamacropus_eugenii
ENSECAG00000001088	LARP1B	81	70.261	ENSOPRG00000005478	LARP1B	100	70.370	Ochotona_princeps
ENSECAG00000001088	LARP1B	84	55.510	ENSONIG00000012386	larp1b	99	55.946	Oreochromis_niloticus
ENSECAG00000001088	LARP1B	82	88.357	ENSOCUG00000013330	LARP1B	100	88.357	Oryctolagus_cuniculus
ENSECAG00000001088	LARP1B	86	54.133	ENSORLG00000017954	larp1b	89	54.254	Oryzias_latipes
ENSECAG00000001088	LARP1B	87	54.254	ENSORLG00020013081	larp1b	89	54.154	Oryzias_latipes_hni
ENSECAG00000001088	LARP1B	88	54.900	ENSORLG00015009580	larp1b	89	54.764	Oryzias_latipes_hsok
ENSECAG00000001088	LARP1B	86	54.619	ENSOMEG00000004210	larp1b	86	56.021	Oryzias_melastigma
ENSECAG00000001088	LARP1B	80	90.611	ENSOGAG00000005771	LARP1B	100	90.611	Otolemur_garnettii
ENSECAG00000001088	LARP1B	81	89.410	ENSOARG00000015300	LARP1B	100	89.410	Ovis_aries
ENSECAG00000001088	LARP1B	81	88.743	ENSPPAG00000030439	LARP1B	98	92.401	Pan_paniscus
ENSECAG00000001088	LARP1B	81	88.743	ENSPTRG00000016437	LARP1B	98	92.097	Pan_troglodytes
ENSECAG00000001088	LARP1B	81	89.497	ENSPANG00000012488	LARP1B	98	93.009	Papio_anubis
ENSECAG00000001088	LARP1B	84	50.265	ENSPKIG00000014360	larp1b	95	50.797	Paramormyrops_kingsleyae
ENSECAG00000001088	LARP1B	83	76.749	ENSPSIG00000012885	LARP1B	99	77.031	Pelodiscus_sinensis
ENSECAG00000001088	LARP1B	62	62.774	ENSPMGG00000007207	larp1b	88	61.222	Periophthalmus_magnuspinnatus
ENSECAG00000001088	LARP1B	59	59.130	ENSPMAG00000002700	larp1b	96	54.729	Petromyzon_marinus
ENSECAG00000001088	LARP1B	83	82.484	ENSPCIG00000026516	LARP1B	100	85.298	Phascolarctos_cinereus
ENSECAG00000001088	LARP1B	88	54.433	ENSPFOG00000019519	larp1b	90	54.927	Poecilia_formosa
ENSECAG00000001088	LARP1B	51	49.589	ENSPFOG00000022837	-	85	50.333	Poecilia_formosa
ENSECAG00000001088	LARP1B	88	55.718	ENSPLAG00000007115	larp1b	89	56.256	Poecilia_latipinna
ENSECAG00000001088	LARP1B	88	55.523	ENSPMEG00000001224	larp1b	89	56.366	Poecilia_mexicana
ENSECAG00000001088	LARP1B	81	85.371	ENSPCAG00000007546	LARP1B	100	85.371	Procavia_capensis
ENSECAG00000001088	LARP1B	72	90.569	ENSPCOG00000021874	LARP1B	98	94.817	Propithecus_coquereli
ENSECAG00000001088	LARP1B	81	85.509	ENSPVAG00000005373	LARP1B	100	85.509	Pteropus_vampyrus
ENSECAG00000001088	LARP1B	62	63.768	ENSPNYG00000017357	larp1b	98	60.255	Pundamilia_nyererei
ENSECAG00000001088	LARP1B	86	53.059	ENSPNAG00000008823	larp1b	83	57.361	Pygocentrus_nattereri
ENSECAG00000001088	LARP1B	81	89.278	ENSRROG00000030771	LARP1B	98	93.313	Rhinopithecus_roxellana
ENSECAG00000001088	LARP1B	59	84.776	ENSSHAG00000014474	LARP1B	99	85.007	Sarcophilus_harrisii
ENSECAG00000001088	LARP1B	81	56.536	ENSSMAG00000006347	larp1b	92	56.720	Scophthalmus_maximus
ENSECAG00000001088	LARP1B	84	56.347	ENSSDUG00000004182	larp1b	86	56.522	Seriola_dumerili
ENSECAG00000001088	LARP1B	76	61.495	ENSSLDG00000014613	larp1b	85	60.589	Seriola_lalandi_dorsalis
ENSECAG00000001088	LARP1B	80	68.238	ENSSPUG00000011837	LARP1B	99	67.452	Sphenodon_punctatus
ENSECAG00000001088	LARP1B	84	56.687	ENSSPAG00000017772	larp1b	91	54.511	Stegastes_partitus
ENSECAG00000001088	LARP1B	100	88.799	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSECAG00000001088	LARP1B	67	71.958	ENSTGUG00000002098	-	98	66.175	Taeniopygia_guttata
ENSECAG00000001088	LARP1B	84	54.669	ENSTRUG00000005612	larp1b	89	53.273	Takifugu_rubripes
ENSECAG00000001088	LARP1B	84	54.082	ENSTNIG00000012398	larp1b	99	54.286	Tetraodon_nigroviridis
ENSECAG00000001088	LARP1B	70	86.667	ENSTBEG00000004177	LARP1B	88	86.667	Tupaia_belangeri
ENSECAG00000001088	LARP1B	81	80.546	ENSTTRG00000012984	LARP1B	100	80.546	Tursiops_truncatus
ENSECAG00000001088	LARP1B	82	92.274	ENSUMAG00000007373	LARP1B	100	92.274	Ursus_maritimus
ENSECAG00000001088	LARP1B	81	79.295	ENSVPAG00000007223	LARP1B	100	79.295	Vicugna_pacos
ENSECAG00000001088	LARP1B	82	92.709	ENSVVUG00000011307	LARP1B	99	94.303	Vulpes_vulpes
ENSECAG00000001088	LARP1B	88	58.956	ENSXETG00000022512	larp1b	94	58.951	Xenopus_tropicalis
ENSECAG00000001088	LARP1B	59	61.019	ENSXCOG00000004435	larp1b	73	59.459	Xiphophorus_couchianus
ENSECAG00000001088	LARP1B	85	56.142	ENSXMAG00000008150	larp1b	90	55.644	Xiphophorus_maculatus