EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000001358 (Gene tree)
Gene ID: 100056034
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 37698 bases
Position: chr1:71862826-71900523
Accession: 15854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000029277	AARP2CN	PF08142.12	2.2e-30	1	1
ENSECAP00000002870	AARP2CN	PF08142.12	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000042935	-	4431	-	ENSECAP00000029277	1240 (aa)	-	-
ENSECAT00000004160	-	4554	XM_005602645	ENSECAP00000002870	1281 (aa)	XP_005602702	F6WNC3

Gene Model

Click here to download ENSECAG00000001358's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000001358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000001358	BMS1	99	89.572	ENSG00000165733	BMS1	99	90.039	Homo_sapiens
ENSECAG00000001358	BMS1	71	72.318	ENSAPOG00000002296	bms1	99	60.331	Acanthochromis_polyacanthus
ENSECAG00000001358	BMS1	99	91.667	ENSAMEG00000016834	BMS1	99	91.193	Ailuropoda_melanoleuca
ENSECAG00000001358	BMS1	87	68.994	ENSACIG00000002588	bms1	94	68.277	Amphilophus_citrinellus
ENSECAG00000001358	BMS1	86	68.720	ENSAOCG00000018088	bms1	99	62.238	Amphiprion_ocellaris
ENSECAG00000001358	BMS1	84	69.198	ENSAPEG00000014673	bms1	99	61.989	Amphiprion_percula
ENSECAG00000001358	BMS1	88	68.971	ENSATEG00000023465	bms1	99	61.645	Anabas_testudineus
ENSECAG00000001358	BMS1	95	72.955	ENSAPLG00000003759	BMS1	100	73.167	Anas_platyrhynchos
ENSECAG00000001358	BMS1	100	70.498	ENSACAG00000004537	-	100	70.322	Anolis_carolinensis
ENSECAG00000001358	BMS1	99	88.872	ENSANAG00000023432	BMS1	99	89.494	Aotus_nancymaae
ENSECAG00000001358	BMS1	97	61.216	ENSACLG00000001294	bms1	99	62.231	Astatotilapia_calliptera
ENSECAG00000001358	BMS1	81	72.248	ENSAMXG00000011236	bms1	51	65.373	Astyanax_mexicanus
ENSECAG00000001358	BMS1	100	91.919	ENSBTAG00000012878	BMS1	100	92.003	Bos_taurus
ENSECAG00000001358	BMS1	80	52.657	WBGene00022021	Y61A9LA.10	99	49.080	Caenorhabditis_elegans
ENSECAG00000001358	BMS1	99	89.961	ENSCJAG00000021705	BMS1	99	90.039	Callithrix_jacchus
ENSECAG00000001358	BMS1	100	91.997	ENSCAFG00000007114	BMS1	100	91.997	Canis_familiaris
ENSECAG00000001358	BMS1	100	91.997	ENSCAFG00020025282	BMS1	100	91.997	Canis_lupus_dingo
ENSECAG00000001358	BMS1	100	91.608	ENSCHIG00000023251	BMS1	100	91.693	Capra_hircus
ENSECAG00000001358	BMS1	99	84.109	ENSCAPG00000008652	BMS1	99	83.708	Cavia_aperea
ENSECAG00000001358	BMS1	99	85.870	ENSCPOG00000000502	BMS1	99	85.480	Cavia_porcellus
ENSECAG00000001358	BMS1	99	74.883	ENSCCAG00000024969	-	99	75.505	Cebus_capucinus
ENSECAG00000001358	BMS1	90	67.711	ENSCATG00000008695	-	97	67.916	Cercocebus_atys
ENSECAG00000001358	BMS1	99	90.039	ENSCATG00000030625	-	99	90.428	Cercocebus_atys
ENSECAG00000001358	BMS1	99	85.714	ENSCLAG00000002446	BMS1	99	85.168	Chinchilla_lanigera
ENSECAG00000001358	BMS1	99	90.428	ENSCSAG00000011118	BMS1	99	90.817	Chlorocebus_sabaeus
ENSECAG00000001358	BMS1	100	88.967	ENSCHOG00000011055	BMS1	100	89.200	Choloepus_hoffmanni
ENSECAG00000001358	BMS1	99	74.037	ENSCPBG00000025581	BMS1	99	73.152	Chrysemys_picta_bellii
ENSECAG00000001358	BMS1	79	58.596	ENSCING00000003181	-	99	55.482	Ciona_intestinalis
ENSECAG00000001358	BMS1	67	55.181	ENSCSAVG00000004113	-	88	59.770	Ciona_savignyi
ENSECAG00000001358	BMS1	99	91.051	ENSCANG00000011609	BMS1	99	91.051	Colobus_angolensis_palliatus
ENSECAG00000001358	BMS1	99	86.183	ENSCGRG00001019461	Bms1	99	85.792	Cricetulus_griseus_chok1gshd
ENSECAG00000001358	BMS1	99	86.183	ENSCGRG00000009016	Bms1	99	85.792	Cricetulus_griseus_crigri
ENSECAG00000001358	BMS1	88	68.182	ENSCSEG00000002469	bms1	50	68.669	Cynoglossus_semilaevis
ENSECAG00000001358	BMS1	85	68.269	ENSCVAG00000008371	bms1	96	68.069	Cyprinodon_variegatus
ENSECAG00000001358	BMS1	88	67.302	ENSDARG00000054154	bms1	99	61.801	Danio_rerio
ENSECAG00000001358	BMS1	100	90.031	ENSDNOG00000015761	BMS1	100	90.108	Dasypus_novemcinctus
ENSECAG00000001358	BMS1	99	87.480	ENSDORG00000002982	Bms1	99	87.793	Dipodomys_ordii
ENSECAG00000001358	BMS1	76	61.067	FBgn0036686	CG7728	97	53.579	Drosophila_melanogaster
ENSECAG00000001358	BMS1	88	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
ENSECAG00000001358	BMS1	100	99.532	ENSEASG00005006894	BMS1	100	99.532	Equus_asinus_asinus
ENSECAG00000001358	BMS1	90	66.793	ENSELUG00000001756	bms1	95	66.792	Esox_lucius
ENSECAG00000001358	BMS1	100	92.152	ENSFCAG00000011220	BMS1	100	91.764	Felis_catus
ENSECAG00000001358	BMS1	99	71.385	ENSFALG00000006882	BMS1	99	72.464	Ficedula_albicollis
ENSECAG00000001358	BMS1	99	84.711	ENSFDAG00000001422	BMS1	99	84.309	Fukomys_damarensis
ENSECAG00000001358	BMS1	85	69.295	ENSFHEG00000003367	bms1	99	62.305	Fundulus_heteroclitus
ENSECAG00000001358	BMS1	89	65.645	ENSGMOG00000000718	bms1	96	65.640	Gadus_morhua
ENSECAG00000001358	BMS1	100	72.783	ENSGALG00000002624	BMS1	99	72.971	Gallus_gallus
ENSECAG00000001358	BMS1	99	59.618	ENSGACG00000015334	bms1	89	66.186	Gasterosteus_aculeatus
ENSECAG00000001358	BMS1	100	73.988	ENSGAGG00000003467	BMS1	100	73.504	Gopherus_agassizii
ENSECAG00000001358	BMS1	87	68.539	ENSHBUG00000022628	bms1	99	62.327	Haplochromis_burtoni
ENSECAG00000001358	BMS1	99	84.934	ENSHGLG00000000477	BMS1	99	84.153	Heterocephalus_glaber_female
ENSECAG00000001358	BMS1	99	85.012	ENSHGLG00100002176	BMS1	99	84.231	Heterocephalus_glaber_male
ENSECAG00000001358	BMS1	89	67.427	ENSHCOG00000017604	bms1	99	60.642	Hippocampus_comes
ENSECAG00000001358	BMS1	99	61.229	ENSIPUG00000017855	bms1	94	72.912	Ictalurus_punctatus
ENSECAG00000001358	BMS1	99	88.620	ENSSTOG00000015063	BMS1	99	88.162	Ictidomys_tridecemlineatus
ENSECAG00000001358	BMS1	99	86.139	ENSJJAG00000017328	Bms1	99	86.374	Jaculus_jaculus
ENSECAG00000001358	BMS1	61	63.815	ENSKMAG00000021982	bms1	96	65.116	Kryptolebias_marmoratus
ENSECAG00000001358	BMS1	82	70.387	ENSLBEG00000028208	bms1	99	60.417	Labrus_bergylta
ENSECAG00000001358	BMS1	99	61.699	ENSLACG00000001600	BMS1	100	62.096	Latimeria_chalumnae
ENSECAG00000001358	BMS1	84	74.382	ENSLOCG00000012914	bms1	99	63.566	Lepisosteus_oculatus
ENSECAG00000001358	BMS1	99	89.556	ENSLAFG00000006250	BMS1	99	88.932	Loxodonta_africana
ENSECAG00000001358	BMS1	84	89.642	ENSMFAG00000037771	BMS1	99	90.328	Macaca_fascicularis
ENSECAG00000001358	BMS1	90	76.309	ENSMMUG00000007426	-	99	76.137	Macaca_mulatta
ENSECAG00000001358	BMS1	85	71.376	ENSMLEG00000029084	-	97	71.560	Mandrillus_leucophaeus
ENSECAG00000001358	BMS1	99	59.660	ENSMAMG00000020855	bms1	97	64.806	Mastacembelus_armatus
ENSECAG00000001358	BMS1	97	61.216	ENSMZEG00005005663	bms1	99	62.154	Maylandia_zebra
ENSECAG00000001358	BMS1	95	70.929	ENSMGAG00000001170	BMS1	99	71.945	Meleagris_gallopavo
ENSECAG00000001358	BMS1	99	85.324	ENSMAUG00000002195	Bms1	99	85.168	Mesocricetus_auratus
ENSECAG00000001358	BMS1	100	89.372	ENSMICG00000009977	BMS1	100	89.604	Microcebus_murinus
ENSECAG00000001358	BMS1	99	85.569	ENSMOCG00000002038	Bms1	99	85.725	Microtus_ochrogaster
ENSECAG00000001358	BMS1	85	67.635	ENSMMOG00000000977	bms1	97	66.095	Mola_mola
ENSECAG00000001358	BMS1	99	78.665	ENSMODG00000001177	BMS1	99	79.400	Monodelphis_domestica
ENSECAG00000001358	BMS1	99	60.389	ENSMALG00000009680	bms1	99	60.557	Monopterus_albus
ENSECAG00000001358	BMS1	74	95.146	MGP_CAROLIEiJ_G0028785	-	86	95.146	Mus_caroli
ENSECAG00000001358	BMS1	99	85.237	ENSMUSG00000030138	Bms1	99	85.004	Mus_musculus
ENSECAG00000001358	BMS1	99	85.837	MGP_PahariEiJ_G0022539	Bms1	99	85.136	Mus_pahari
ENSECAG00000001358	BMS1	99	84.926	MGP_SPRETEiJ_G0029816	Bms1	99	84.460	Mus_spretus
ENSECAG00000001358	BMS1	100	92.350	ENSMPUG00000017276	BMS1	100	92.037	Mustela_putorius_furo
ENSECAG00000001358	BMS1	100	90.584	ENSMLUG00000003260	BMS1	100	90.350	Myotis_lucifugus
ENSECAG00000001358	BMS1	99	75.411	ENSNGAG00000015258	Bms1	99	75.292	Nannospalax_galili
ENSECAG00000001358	BMS1	99	88.016	ENSNLEG00000015791	BMS1	99	88.949	Nomascus_leucogenys
ENSECAG00000001358	BMS1	81	95.476	ENSOPRG00000005195	BMS1	81	95.476	Ochotona_princeps
ENSECAG00000001358	BMS1	99	85.636	ENSODEG00000005554	BMS1	99	85.324	Octodon_degus
ENSECAG00000001358	BMS1	89	69.082	ENSONIG00000007227	bms1	99	62.191	Oreochromis_niloticus
ENSECAG00000001358	BMS1	100	76.941	ENSOANG00000000662	-	100	77.580	Ornithorhynchus_anatinus
ENSECAG00000001358	BMS1	99	89.149	ENSOCUG00000005354	BMS1	99	88.993	Oryctolagus_cuniculus
ENSECAG00000001358	BMS1	88	68.277	ENSORLG00000014655	bms1	97	69.066	Oryzias_latipes
ENSECAG00000001358	BMS1	88	68.498	ENSORLG00020016246	bms1	81	68.031	Oryzias_latipes_hni
ENSECAG00000001358	BMS1	88	68.498	ENSORLG00015014183	bms1	99	62.152	Oryzias_latipes_hsok
ENSECAG00000001358	BMS1	88	69.614	ENSOMEG00000015042	bms1	99	63.232	Oryzias_melastigma
ENSECAG00000001358	BMS1	99	90.147	ENSOGAG00000006511	BMS1	99	90.070	Otolemur_garnettii
ENSECAG00000001358	BMS1	100	91.557	ENSOARG00000003900	BMS1	100	91.641	Ovis_aries
ENSECAG00000001358	BMS1	99	85.848	ENSPPAG00000027837	BMS1	99	86.314	Pan_paniscus
ENSECAG00000001358	BMS1	100	91.919	ENSPPRG00000001311	BMS1	100	91.531	Panthera_pardus
ENSECAG00000001358	BMS1	100	90.287	ENSPTIG00000009652	BMS1	100	89.899	Panthera_tigris_altaica
ENSECAG00000001358	BMS1	99	89.805	ENSPTRG00000002441	BMS1	99	90.195	Pan_troglodytes
ENSECAG00000001358	BMS1	88	66.925	ENSPKIG00000008165	bms1	87	67.636	Paramormyrops_kingsleyae
ENSECAG00000001358	BMS1	100	72.797	ENSPSIG00000006481	BMS1	99	73.446	Pelodiscus_sinensis
ENSECAG00000001358	BMS1	99	80.505	ENSPEMG00000022467	Bms1	99	79.700	Peromyscus_maniculatus_bairdii
ENSECAG00000001358	BMS1	95	93.289	ENSPCIG00000001339	BMS1	98	86.723	Phascolarctos_cinereus
ENSECAG00000001358	BMS1	80	74.877	ENSPFOG00000015180	bms1	97	65.271	Poecilia_formosa
ENSECAG00000001358	BMS1	79	75.123	ENSPMEG00000023176	bms1	94	66.602	Poecilia_mexicana
ENSECAG00000001358	BMS1	79	74.083	ENSPREG00000002695	bms1	94	67.528	Poecilia_reticulata
ENSECAG00000001358	BMS1	63	86.812	ENSPPYG00000002836	-	99	87.196	Pongo_abelii
ENSECAG00000001358	BMS1	73	94.558	ENSPCAG00000014528	BMS1	73	94.558	Procavia_capensis
ENSECAG00000001358	BMS1	95	85.149	ENSPCOG00000023834	-	100	85.230	Propithecus_coquereli
ENSECAG00000001358	BMS1	100	88.802	ENSPVAG00000000725	BMS1	100	88.656	Pteropus_vampyrus
ENSECAG00000001358	BMS1	97	63.037	ENSPNYG00000018866	bms1	99	62.529	Pundamilia_nyererei
ENSECAG00000001358	BMS1	86	66.602	ENSPNAG00000000676	bms1	99	62.072	Pygocentrus_nattereri
ENSECAG00000001358	BMS1	82	82.042	ENSRNOG00000006576	Bms1	100	82.605	Rattus_norvegicus
ENSECAG00000001358	BMS1	99	88.093	ENSRROG00000040101	BMS1	99	89.183	Rhinopithecus_roxellana
ENSECAG00000001358	BMS1	73	44.511	YPL217C	-	84	44.511	Saccharomyces_cerevisiae
ENSECAG00000001358	BMS1	99	90.117	ENSSBOG00000035778	BMS1	99	90.584	Saimiri_boliviensis_boliviensis
ENSECAG00000001358	BMS1	99	78.818	ENSSHAG00000005062	BMS1	99	78.588	Sarcophilus_harrisii
ENSECAG00000001358	BMS1	99	62.558	ENSSFOG00015022313	bms1	99	62.539	Scleropages_formosus
ENSECAG00000001358	BMS1	89	67.472	ENSSMAG00000019966	bms1	99	61.345	Scophthalmus_maximus
ENSECAG00000001358	BMS1	88	64.506	ENSSLDG00000015199	bms1	99	61.251	Seriola_lalandi_dorsalis
ENSECAG00000001358	BMS1	70	80.379	ENSSARG00000014407	BMS1	100	80.491	Sorex_araneus
ENSECAG00000001358	BMS1	99	72.762	ENSSPUG00000014454	BMS1	99	72.483	Sphenodon_punctatus
ENSECAG00000001358	BMS1	99	93.157	ENSSSCG00000010198	BMS1	99	92.768	Sus_scrofa
ENSECAG00000001358	BMS1	99	71.254	ENSTGUG00000006302	-	99	71.830	Taeniopygia_guttata
ENSECAG00000001358	BMS1	87	64.575	ENSTRUG00000008028	bms1	99	63.867	Takifugu_rubripes
ENSECAG00000001358	BMS1	99	58.914	ENSTNIG00000006216	bms1	90	65.039	Tetraodon_nigroviridis
ENSECAG00000001358	BMS1	63	93.581	ENSTBEG00000001673	-	63	94.178	Tupaia_belangeri
ENSECAG00000001358	BMS1	100	90.210	ENSTTRG00000007983	BMS1	100	89.744	Tursiops_truncatus
ENSECAG00000001358	BMS1	100	92.818	ENSUAMG00000023996	BMS1	100	92.272	Ursus_americanus
ENSECAG00000001358	BMS1	100	92.740	ENSUMAG00000016523	BMS1	100	92.194	Ursus_maritimus
ENSECAG00000001358	BMS1	88	87.105	ENSVPAG00000007477	BMS1	94	95.717	Vicugna_pacos
ENSECAG00000001358	BMS1	100	91.841	ENSVVUG00000021305	BMS1	100	91.841	Vulpes_vulpes
ENSECAG00000001358	BMS1	98	65.430	ENSXETG00000008158	bms1	99	66.019	Xenopus_tropicalis
ENSECAG00000001358	BMS1	81	72.120	ENSXCOG00000000506	bms1	95	76.108	Xiphophorus_couchianus
ENSECAG00000001358	BMS1	85	67.154	ENSXMAG00000014236	bms1	95	66.193	Xiphophorus_maculatus