EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000002187 (Gene tree)
Gene ID: 100061974
Gene Symbol: C1D
Alias: -
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 148039 bases
Position: chr15:35086040-35234078
Accession: 15933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000001496	Sas10_Utp3	PF04000.15	2.2e-17	1	1
ENSECAP00000032008	Sas10_Utp3	PF04000.15	5.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000031032	-	3628	-	ENSECAP00000032008	212 (aa)	-	-
ENSECAT00000002110	-	1721	-	ENSECAP00000001496	140 (aa)	-	F6VRU6

Gene Model

Click here to download ENSECAG00000002187's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000002187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000002187	C1D	99	97.826	ENSG00000197223	C1D	99	97.122	Homo_sapiens
ENSECAG00000002187	C1D	94	64.394	ENSAPOG00000005466	c1d	97	61.806	Acanthochromis_polyacanthus
ENSECAG00000002187	C1D	99	99.275	ENSAMEG00000004859	C1D	97	97.872	Ailuropoda_melanoleuca
ENSECAG00000002187	C1D	94	65.152	ENSACIG00000012684	c1d	92	61.702	Amphilophus_citrinellus
ENSECAG00000002187	C1D	94	64.394	ENSAOCG00000020354	c1d	97	59.155	Amphiprion_ocellaris
ENSECAG00000002187	C1D	94	64.662	ENSAPEG00000001403	c1d	86	64.662	Amphiprion_percula
ENSECAG00000002187	C1D	97	64.234	ENSATEG00000012922	c1d	88	64.234	Anabas_testudineus
ENSECAG00000002187	C1D	99	75.887	ENSAPLG00000009320	C1D	97	76.429	Anas_platyrhynchos
ENSECAG00000002187	C1D	87	81.148	ENSACAG00000001337	C1D	100	81.148	Anolis_carolinensis
ENSECAG00000002187	C1D	99	97.826	ENSANAG00000035972	-	99	97.122	Aotus_nancymaae
ENSECAG00000002187	C1D	99	94.203	ENSANAG00000005773	-	99	93.525	Aotus_nancymaae
ENSECAG00000002187	C1D	87	66.393	ENSACLG00000026206	c1d	89	63.910	Astatotilapia_calliptera
ENSECAG00000002187	C1D	99	62.676	ENSAMXG00000043212	c1d	97	62.676	Astyanax_mexicanus
ENSECAG00000002187	C1D	99	98.551	ENSBTAG00000049002	C1D	99	97.842	Bos_taurus
ENSECAG00000002187	C1D	84	88.034	ENSCJAG00000044668	-	87	92.793	Callithrix_jacchus
ENSECAG00000002187	C1D	99	98.551	ENSCJAG00000006589	C1D	91	98.551	Callithrix_jacchus
ENSECAG00000002187	C1D	99	98.551	ENSCAFG00000030099	C1D	99	97.842	Canis_familiaris
ENSECAG00000002187	C1D	99	98.551	ENSCAFG00020026997	C1D	99	97.842	Canis_lupus_dingo
ENSECAG00000002187	C1D	99	97.826	ENSCHIG00000025729	C1D	99	97.122	Capra_hircus
ENSECAG00000002187	C1D	99	88.406	ENSTSYG00000026573	-	88	84.828	Carlito_syrichta
ENSECAG00000002187	C1D	99	98.551	ENSTSYG00000035739	-	99	97.842	Carlito_syrichta
ENSECAG00000002187	C1D	86	82.500	ENSCAPG00000011523	-	100	82.500	Cavia_aperea
ENSECAG00000002187	C1D	99	95.652	ENSCPOG00000037986	-	99	94.964	Cavia_porcellus
ENSECAG00000002187	C1D	86	83.333	ENSCPOG00000020112	-	100	83.333	Cavia_porcellus
ENSECAG00000002187	C1D	99	98.551	ENSCCAG00000030405	-	99	97.842	Cebus_capucinus
ENSECAG00000002187	C1D	99	95.652	ENSCATG00000043348	-	99	94.964	Cercocebus_atys
ENSECAG00000002187	C1D	99	97.826	ENSCATG00000045336	C1D	99	97.122	Cercocebus_atys
ENSECAG00000002187	C1D	99	95.652	ENSCLAG00000011883	C1D	99	94.964	Chinchilla_lanigera
ENSECAG00000002187	C1D	99	97.101	ENSCSAG00000014811	C1D	99	97.122	Chlorocebus_sabaeus
ENSECAG00000002187	C1D	99	98.551	ENSCHOG00000006719	C1D	78	97.842	Choloepus_hoffmanni
ENSECAG00000002187	C1D	99	78.417	ENSCPBG00000014451	C1D	94	78.417	Chrysemys_picta_bellii
ENSECAG00000002187	C1D	84	42.373	ENSCING00000020906	-	62	42.017	Ciona_intestinalis
ENSECAG00000002187	C1D	84	47.009	ENSCSAVG00000000150	-	71	43.066	Ciona_savignyi
ENSECAG00000002187	C1D	88	84.553	ENSCANG00000036599	-	100	84.553	Colobus_angolensis_palliatus
ENSECAG00000002187	C1D	99	97.101	ENSCANG00000035564	C1D	99	96.403	Colobus_angolensis_palliatus
ENSECAG00000002187	C1D	99	90.580	ENSCGRG00001023376	C1d	99	89.928	Cricetulus_griseus_chok1gshd
ENSECAG00000002187	C1D	99	90.580	ENSCGRG00000010245	C1d	99	89.928	Cricetulus_griseus_crigri
ENSECAG00000002187	C1D	100	58.865	ENSCSEG00000000587	c1d	99	58.865	Cynoglossus_semilaevis
ENSECAG00000002187	C1D	94	63.359	ENSCVAG00000004603	c1d	87	63.359	Cyprinodon_variegatus
ENSECAG00000002187	C1D	88	65.041	ENSDARG00000021112	c1d	96	59.859	Danio_rerio
ENSECAG00000002187	C1D	99	89.855	ENSDNOG00000046068	-	99	89.209	Dasypus_novemcinctus
ENSECAG00000002187	C1D	99	94.203	ENSDORG00000003300	C1d	99	93.525	Dipodomys_ordii
ENSECAG00000002187	C1D	66	93.478	ENSETEG00000014857	C1D	97	93.478	Echinops_telfairi
ENSECAG00000002187	C1D	87	56.557	ENSEBUG00000006874	c1d	77	56.557	Eptatretus_burgeri
ENSECAG00000002187	C1D	99	100.000	ENSEASG00005007307	C1D	90	100.000	Equus_asinus_asinus
ENSECAG00000002187	C1D	96	65.672	ENSELUG00000014823	c1d	91	65.672	Esox_lucius
ENSECAG00000002187	C1D	99	99.275	ENSFCAG00000028933	C1D	99	98.561	Felis_catus
ENSECAG00000002187	C1D	95	80.000	ENSFALG00000013640	C1D	82	80.000	Ficedula_albicollis
ENSECAG00000002187	C1D	99	96.377	ENSFDAG00000010462	-	99	95.683	Fukomys_damarensis
ENSECAG00000002187	C1D	99	74.820	ENSFDAG00000014175	-	98	74.820	Fukomys_damarensis
ENSECAG00000002187	C1D	97	65.441	ENSFHEG00000010545	c1d	99	62.238	Fundulus_heteroclitus
ENSECAG00000002187	C1D	84	64.957	ENSGMOG00000013911	-	93	64.957	Gadus_morhua
ENSECAG00000002187	C1D	98	77.536	ENSGALG00000008765	C1D	96	77.536	Gallus_gallus
ENSECAG00000002187	C1D	93	65.385	ENSGAFG00000012578	c1d	83	65.891	Gambusia_affinis
ENSECAG00000002187	C1D	89	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSECAG00000002187	C1D	91	79.845	ENSGAGG00000013383	C1D	94	75.540	Gopherus_agassizii
ENSECAG00000002187	C1D	99	98.551	ENSGGOG00000025982	-	77	98.551	Gorilla_gorilla
ENSECAG00000002187	C1D	99	90.580	ENSGGOG00000025808	-	79	90.580	Gorilla_gorilla
ENSECAG00000002187	C1D	99	96.377	ENSGGOG00000022296	-	99	95.683	Gorilla_gorilla
ENSECAG00000002187	C1D	83	67.241	ENSHBUG00000018531	c1d	76	64.567	Haplochromis_burtoni
ENSECAG00000002187	C1D	99	85.507	ENSHGLG00000021219	-	98	85.507	Heterocephalus_glaber_female
ENSECAG00000002187	C1D	93	96.154	ENSHGLG00000012332	-	99	94.245	Heterocephalus_glaber_female
ENSECAG00000002187	C1D	99	92.754	ENSHGLG00100000221	-	99	92.086	Heterocephalus_glaber_male
ENSECAG00000002187	C1D	99	86.232	ENSHGLG00100019951	-	98	86.232	Heterocephalus_glaber_male
ENSECAG00000002187	C1D	92	63.359	ENSHCOG00000014568	C1D	93	61.765	Hippocampus_comes
ENSECAG00000002187	C1D	92	63.359	ENSHCOG00000014589	c1d	93	61.765	Hippocampus_comes
ENSECAG00000002187	C1D	93	60.902	ENSIPUG00000018661	c1d	92	60.902	Ictalurus_punctatus
ENSECAG00000002187	C1D	99	98.551	ENSSTOG00000012346	C1D	99	98.561	Ictidomys_tridecemlineatus
ENSECAG00000002187	C1D	99	74.638	ENSJJAG00000016086	-	100	74.638	Jaculus_jaculus
ENSECAG00000002187	C1D	90	80.769	ENSJJAG00000023186	-	99	80.769	Jaculus_jaculus
ENSECAG00000002187	C1D	99	82.609	ENSJJAG00000005044	-	100	82.609	Jaculus_jaculus
ENSECAG00000002187	C1D	99	82.609	ENSJJAG00000009540	-	100	82.609	Jaculus_jaculus
ENSECAG00000002187	C1D	97	65.441	ENSKMAG00000015077	c1d	88	65.441	Kryptolebias_marmoratus
ENSECAG00000002187	C1D	94	63.636	ENSLBEG00000008351	c1d	91	60.417	Labrus_bergylta
ENSECAG00000002187	C1D	89	79.032	ENSLACG00000007516	C1D	89	76.515	Latimeria_chalumnae
ENSECAG00000002187	C1D	89	72.000	ENSLOCG00000016024	c1d	85	72.000	Lepisosteus_oculatus
ENSECAG00000002187	C1D	99	97.826	ENSLAFG00000002083	C1D	99	97.122	Loxodonta_africana
ENSECAG00000002187	C1D	99	94.928	ENSMFAG00000034034	-	99	94.245	Macaca_fascicularis
ENSECAG00000002187	C1D	99	97.826	ENSMFAG00000034261	C1D	99	97.122	Macaca_fascicularis
ENSECAG00000002187	C1D	99	96.377	ENSMFAG00000028681	-	99	95.683	Macaca_fascicularis
ENSECAG00000002187	C1D	99	97.826	ENSMMUG00000041557	C1D	99	97.826	Macaca_mulatta
ENSECAG00000002187	C1D	99	94.203	ENSMMUG00000043184	-	99	93.525	Macaca_mulatta
ENSECAG00000002187	C1D	99	95.652	ENSMMUG00000017209	-	99	94.964	Macaca_mulatta
ENSECAG00000002187	C1D	99	94.203	ENSMNEG00000020626	-	99	93.525	Macaca_nemestrina
ENSECAG00000002187	C1D	99	97.826	ENSMNEG00000040612	C1D	99	97.122	Macaca_nemestrina
ENSECAG00000002187	C1D	99	97.826	ENSMLEG00000027619	C1D	99	97.122	Mandrillus_leucophaeus
ENSECAG00000002187	C1D	99	95.652	ENSMLEG00000028412	-	99	94.964	Mandrillus_leucophaeus
ENSECAG00000002187	C1D	91	65.625	ENSMAMG00000022156	c1d	90	65.468	Mastacembelus_armatus
ENSECAG00000002187	C1D	83	67.241	ENSMZEG00005027343	c1d	87	64.567	Maylandia_zebra
ENSECAG00000002187	C1D	99	77.698	ENSMGAG00000004517	C1D	98	77.698	Meleagris_gallopavo
ENSECAG00000002187	C1D	99	89.855	ENSMAUG00000008974	C1d	99	89.209	Mesocricetus_auratus
ENSECAG00000002187	C1D	99	97.101	ENSMICG00000032141	C1D	99	96.403	Microcebus_murinus
ENSECAG00000002187	C1D	99	90.580	ENSMOCG00000010860	C1d	99	89.928	Microtus_ochrogaster
ENSECAG00000002187	C1D	99	64.029	ENSMMOG00000007332	c1d	90	64.029	Mola_mola
ENSECAG00000002187	C1D	99	82.143	ENSMODG00000003561	C1D	99	82.143	Monodelphis_domestica
ENSECAG00000002187	C1D	94	63.636	ENSMALG00000020864	c1d	95	64.800	Monopterus_albus
ENSECAG00000002187	C1D	99	89.130	MGP_CAROLIEiJ_G0016110	C1d	100	90.678	Mus_caroli
ENSECAG00000002187	C1D	99	89.130	ENSMUSG00000000581	C1d	100	90.678	Mus_musculus
ENSECAG00000002187	C1D	99	89.855	MGP_PahariEiJ_G0016781	C1d	100	91.525	Mus_pahari
ENSECAG00000002187	C1D	99	89.130	MGP_SPRETEiJ_G0016952	C1d	100	90.678	Mus_spretus
ENSECAG00000002187	C1D	99	98.551	ENSMPUG00000006224	C1D	99	97.842	Mustela_putorius_furo
ENSECAG00000002187	C1D	99	91.304	ENSMLUG00000029990	-	99	90.647	Myotis_lucifugus
ENSECAG00000002187	C1D	99	92.754	ENSMLUG00000024947	-	99	92.086	Myotis_lucifugus
ENSECAG00000002187	C1D	99	94.928	ENSMLUG00000010791	-	99	94.245	Myotis_lucifugus
ENSECAG00000002187	C1D	88	81.301	ENSNGAG00000012482	-	98	81.301	Nannospalax_galili
ENSECAG00000002187	C1D	99	81.884	ENSNGAG00000016675	-	98	81.884	Nannospalax_galili
ENSECAG00000002187	C1D	99	89.130	ENSNGAG00000011872	-	98	89.130	Nannospalax_galili
ENSECAG00000002187	C1D	88	64.228	ENSNBRG00000010704	c1d	87	63.780	Neolamprologus_brichardi
ENSECAG00000002187	C1D	99	97.826	ENSNLEG00000032919	-	77	97.842	Nomascus_leucogenys
ENSECAG00000002187	C1D	99	96.377	ENSOPRG00000009586	C1D	99	96.403	Ochotona_princeps
ENSECAG00000002187	C1D	99	96.403	ENSODEG00000011242	-	99	96.403	Octodon_degus
ENSECAG00000002187	C1D	99	95.683	ENSODEG00000018885	-	100	95.683	Octodon_degus
ENSECAG00000002187	C1D	99	85.507	ENSODEG00000018525	-	99	85.612	Octodon_degus
ENSECAG00000002187	C1D	88	66.667	ENSONIG00000001233	c1d	89	64.179	Oreochromis_niloticus
ENSECAG00000002187	C1D	78	88.073	ENSOANG00000008385	C1D	98	88.073	Ornithorhynchus_anatinus
ENSECAG00000002187	C1D	99	95.652	ENSOCUG00000009771	-	99	95.683	Oryctolagus_cuniculus
ENSECAG00000002187	C1D	99	95.652	ENSOCUG00000025587	-	99	95.683	Oryctolagus_cuniculus
ENSECAG00000002187	C1D	94	67.424	ENSORLG00000021968	c1d	83	67.424	Oryzias_latipes
ENSECAG00000002187	C1D	94	67.424	ENSORLG00020000507	c1d	84	67.424	Oryzias_latipes_hni
ENSECAG00000002187	C1D	94	66.165	ENSORLG00015004594	c1d	85	66.165	Oryzias_latipes_hsok
ENSECAG00000002187	C1D	94	67.424	ENSOMEG00000004672	c1d	85	67.424	Oryzias_melastigma
ENSECAG00000002187	C1D	99	97.101	ENSOGAG00000027934	-	99	97.122	Otolemur_garnettii
ENSECAG00000002187	C1D	99	97.826	ENSOARG00000019931	C1D	98	97.122	Ovis_aries
ENSECAG00000002187	C1D	99	98.551	ENSPPAG00000037847	-	99	97.842	Pan_paniscus
ENSECAG00000002187	C1D	99	91.304	ENSPPAG00000040091	-	79	91.304	Pan_paniscus
ENSECAG00000002187	C1D	99	98.551	ENSPPRG00000017045	-	99	97.842	Panthera_pardus
ENSECAG00000002187	C1D	99	66.667	ENSPPRG00000022830	-	98	66.906	Panthera_pardus
ENSECAG00000002187	C1D	99	99.275	ENSPTIG00000009414	C1D	99	98.561	Panthera_tigris_altaica
ENSECAG00000002187	C1D	99	98.551	ENSPTRG00000023558	C1D	99	97.842	Pan_troglodytes
ENSECAG00000002187	C1D	99	97.826	ENSPANG00000002886	C1D	77	97.826	Papio_anubis
ENSECAG00000002187	C1D	99	94.928	ENSPANG00000000501	-	99	94.245	Papio_anubis
ENSECAG00000002187	C1D	94	64.394	ENSPKIG00000004877	c1d	89	64.394	Paramormyrops_kingsleyae
ENSECAG00000002187	C1D	94	82.443	ENSPSIG00000010015	C1D	96	79.856	Pelodiscus_sinensis
ENSECAG00000002187	C1D	92	63.566	ENSPMGG00000009326	c1d	85	62.879	Periophthalmus_magnuspinnatus
ENSECAG00000002187	C1D	99	77.536	ENSPCIG00000006831	-	97	76.978	Phascolarctos_cinereus
ENSECAG00000002187	C1D	99	83.571	ENSPCIG00000018629	-	99	83.571	Phascolarctos_cinereus
ENSECAG00000002187	C1D	97	65.441	ENSPFOG00000003686	c1d	88	65.441	Poecilia_formosa
ENSECAG00000002187	C1D	99	64.748	ENSPLAG00000000228	c1d	99	64.748	Poecilia_latipinna
ENSECAG00000002187	C1D	97	65.441	ENSPMEG00000023213	c1d	88	65.441	Poecilia_mexicana
ENSECAG00000002187	C1D	100	65.000	ENSPREG00000000742	c1d	99	65.000	Poecilia_reticulata
ENSECAG00000002187	C1D	99	98.551	ENSPPYG00000012354	C1D	76	98.551	Pongo_abelii
ENSECAG00000002187	C1D	99	92.029	ENSPPYG00000002294	-	99	91.367	Pongo_abelii
ENSECAG00000002187	C1D	99	84.783	ENSPCAG00000010088	C1D	78	84.173	Procavia_capensis
ENSECAG00000002187	C1D	99	97.101	ENSPCOG00000016112	C1D	99	96.403	Propithecus_coquereli
ENSECAG00000002187	C1D	99	97.826	ENSPVAG00000012692	C1D	78	97.122	Pteropus_vampyrus
ENSECAG00000002187	C1D	83	67.241	ENSPNYG00000008789	c1d	87	64.567	Pundamilia_nyererei
ENSECAG00000002187	C1D	99	64.085	ENSPNAG00000004219	c1d	97	64.085	Pygocentrus_nattereri
ENSECAG00000002187	C1D	99	90.580	ENSRNOG00000005982	C1d	99	89.928	Rattus_norvegicus
ENSECAG00000002187	C1D	99	94.203	ENSRBIG00000026211	-	99	93.525	Rhinopithecus_bieti
ENSECAG00000002187	C1D	99	97.826	ENSRROG00000029013	C1D	99	97.122	Rhinopithecus_roxellana
ENSECAG00000002187	C1D	99	94.203	ENSRROG00000005944	-	99	93.525	Rhinopithecus_roxellana
ENSECAG00000002187	C1D	99	98.551	ENSSBOG00000025275	C1D	99	97.842	Saimiri_boliviensis_boliviensis
ENSECAG00000002187	C1D	99	82.857	ENSSHAG00000008352	C1D	67	82.857	Sarcophilus_harrisii
ENSECAG00000002187	C1D	89	68.800	ENSSFOG00015010861	c1d	89	68.800	Scleropages_formosus
ENSECAG00000002187	C1D	96	61.194	ENSSMAG00000019230	c1d	86	61.194	Scophthalmus_maximus
ENSECAG00000002187	C1D	94	65.152	ENSSDUG00000020213	c1d	85	65.152	Seriola_dumerili
ENSECAG00000002187	C1D	94	65.152	ENSSLDG00000017371	c1d	85	65.152	Seriola_lalandi_dorsalis
ENSECAG00000002187	C1D	90	79.365	ENSSPUG00000006525	C1D	91	76.692	Sphenodon_punctatus
ENSECAG00000002187	C1D	93	66.923	ENSSPAG00000008574	c1d	89	65.217	Stegastes_partitus
ENSECAG00000002187	C1D	99	98.551	ENSSSCG00000039331	-	99	97.842	Sus_scrofa
ENSECAG00000002187	C1D	86	75.833	ENSSSCG00000035701	-	100	75.833	Sus_scrofa
ENSECAG00000002187	C1D	94	79.851	ENSTGUG00000002367	C1D	93	79.851	Taeniopygia_guttata
ENSECAG00000002187	C1D	94	61.314	ENSTRUG00000012245	c1d	83	61.314	Takifugu_rubripes
ENSECAG00000002187	C1D	99	61.151	ENSTNIG00000009827	c1d	95	60.714	Tetraodon_nigroviridis
ENSECAG00000002187	C1D	99	97.826	ENSTBEG00000009797	C1D	99	97.122	Tupaia_belangeri
ENSECAG00000002187	C1D	99	97.826	ENSTTRG00000013982	C1D	80	97.122	Tursiops_truncatus
ENSECAG00000002187	C1D	99	83.688	ENSUAMG00000025246	C1D	98	83.688	Ursus_americanus
ENSECAG00000002187	C1D	72	76.923	ENSUMAG00000006451	-	91	76.316	Ursus_maritimus
ENSECAG00000002187	C1D	99	99.275	ENSUMAG00000021118	-	99	98.561	Ursus_maritimus
ENSECAG00000002187	C1D	99	96.377	ENSVPAG00000012080	C1D	78	96.377	Vicugna_pacos
ENSECAG00000002187	C1D	99	97.826	ENSVVUG00000027629	C1D	87	97.122	Vulpes_vulpes
ENSECAG00000002187	C1D	99	69.784	ENSXETG00000025934	c1d	100	67.586	Xenopus_tropicalis
ENSECAG00000002187	C1D	89	67.200	ENSXCOG00000013813	c1d	88	64.706	Xiphophorus_couchianus
ENSECAG00000002187	C1D	89	66.400	ENSXMAG00000022273	c1d	88	63.971	Xiphophorus_maculatus