EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000002620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 5286 bases
Position: chrX:57615972-57621257
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000001739	RRM_1	PF00076.22	8.3e-43	1	2
ENSECAP00000001739	RRM_1	PF00076.22	8.3e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000002440	-	633	-	ENSECAP00000001739	210 (aa)	-	F6VG87

Gene Model

Click here to download ENSECAG00000002620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000002620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000002620	-	83	32.692	ENSECAG00000019459	ELAVL1	95	32.692
ENSECAG00000002620	-	98	78.641	ENSECAG00000020699	PABPC1	59	78.641
ENSECAG00000002620	-	70	37.838	ENSECAG00000024257	RBM3	84	31.579
ENSECAG00000002620	-	95	76.382	ENSECAG00000009396	PABPC4	56	76.382
ENSECAG00000002620	-	71	33.113	ENSECAG00000020594	ELAVL3	91	32.895
ENSECAG00000002620	-	75	34.167	ENSECAG00000009970	TIAL1	93	34.167
ENSECAG00000002620	-	75	34.247	ENSECAG00000020365	CELF3	52	34.247
ENSECAG00000002620	-	96	60.606	ENSECAG00000031416	PABPC4L	95	60.606
ENSECAG00000002620	-	96	48.990	ENSECAG00000038200	-	55	48.990
ENSECAG00000002620	-	70	44.262	ENSECAG00000040139	-	58	44.262
ENSECAG00000002620	-	93	59.896	ENSECAG00000003452	PABPC5	96	57.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000002620	-	95	99.000	ENSG00000184388	PABPC1L2B	100	99.000	Homo_sapiens
ENSECAG00000002620	-	95	99.000	ENSG00000186288	PABPC1L2A	100	99.000	Homo_sapiens
ENSECAG00000002620	-	98	78.155	ENSAPOG00000017776	pabpc1b	61	78.155	Acanthochromis_polyacanthus
ENSECAG00000002620	-	98	78.641	ENSAPOG00000015105	pabpc1a	59	78.641	Acanthochromis_polyacanthus
ENSECAG00000002620	-	95	99.500	ENSAMEG00000019441	-	100	99.500	Ailuropoda_melanoleuca
ENSECAG00000002620	-	98	78.641	ENSACIG00000004685	pabpc1a	59	78.641	Amphilophus_citrinellus
ENSECAG00000002620	-	98	77.184	ENSACIG00000018366	pabpc1b	60	77.184	Amphilophus_citrinellus
ENSECAG00000002620	-	98	78.641	ENSAOCG00000011656	pabpc1a	59	78.641	Amphiprion_ocellaris
ENSECAG00000002620	-	98	78.641	ENSAOCG00000019839	pabpc1b	59	78.641	Amphiprion_ocellaris
ENSECAG00000002620	-	98	78.641	ENSAPEG00000010435	pabpc1b	59	78.641	Amphiprion_percula
ENSECAG00000002620	-	98	78.641	ENSAPEG00000006963	pabpc1a	59	78.641	Amphiprion_percula
ENSECAG00000002620	-	98	77.670	ENSATEG00000012917	pabpc1b	59	77.670	Anabas_testudineus
ENSECAG00000002620	-	98	78.641	ENSATEG00000024852	pabpc1a	59	78.641	Anabas_testudineus
ENSECAG00000002620	-	95	99.000	ENSANAG00000019431	-	100	99.000	Aotus_nancymaae
ENSECAG00000002620	-	95	99.000	ENSANAG00000019429	-	100	99.000	Aotus_nancymaae
ENSECAG00000002620	-	98	78.641	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSECAG00000002620	-	98	76.699	ENSACLG00000014335	pabpc1b	59	76.699	Astatotilapia_calliptera
ENSECAG00000002620	-	98	78.155	ENSAMXG00000008599	pabpc1b	59	78.155	Astyanax_mexicanus
ENSECAG00000002620	-	100	96.714	ENSBTAG00000052491	-	100	96.714	Bos_taurus
ENSECAG00000002620	-	99	99.043	ENSBTAG00000050902	-	99	99.043	Bos_taurus
ENSECAG00000002620	-	95	99.000	ENSCJAG00000041326	-	100	99.000	Callithrix_jacchus
ENSECAG00000002620	-	100	98.095	ENSCAFG00020002052	-	100	98.095	Canis_lupus_dingo
ENSECAG00000002620	-	95	99.000	ENSCHIG00000006283	-	100	99.000	Capra_hircus
ENSECAG00000002620	-	95	99.500	ENSCHIG00000011138	-	100	99.500	Capra_hircus
ENSECAG00000002620	-	95	99.500	ENSTSYG00000001775	-	100	99.500	Carlito_syrichta
ENSECAG00000002620	-	95	99.000	ENSCPOG00000009525	-	100	99.000	Cavia_porcellus
ENSECAG00000002620	-	95	99.000	ENSCCAG00000031524	-	100	99.000	Cebus_capucinus
ENSECAG00000002620	-	95	99.000	ENSCATG00000043125	-	100	99.000	Cercocebus_atys
ENSECAG00000002620	-	95	99.000	ENSCATG00000042826	-	100	99.000	Cercocebus_atys
ENSECAG00000002620	-	95	96.500	ENSCLAG00000017412	-	100	96.500	Chinchilla_lanigera
ENSECAG00000002620	-	95	96.500	ENSCLAG00000017409	-	100	96.500	Chinchilla_lanigera
ENSECAG00000002620	-	95	99.000	ENSCSAG00000000102	-	100	99.000	Chlorocebus_sabaeus
ENSECAG00000002620	-	95	93.467	ENSCGRG00001023387	-	98	93.467	Cricetulus_griseus_chok1gshd
ENSECAG00000002620	-	98	77.670	ENSCSEG00000015241	-	59	77.670	Cynoglossus_semilaevis
ENSECAG00000002620	-	98	78.641	ENSCSEG00000013324	pabpc1a	59	78.641	Cynoglossus_semilaevis
ENSECAG00000002620	-	98	78.641	ENSCVAG00000021872	pabpc1a	59	78.641	Cyprinodon_variegatus
ENSECAG00000002620	-	98	78.155	ENSCVAG00000005489	pabpc1b	59	78.155	Cyprinodon_variegatus
ENSECAG00000002620	-	98	78.155	ENSDARG00000017219	pabpc1a	59	78.155	Danio_rerio
ENSECAG00000002620	-	98	77.670	ENSDARG00000021140	pabpc1b	99	79.577	Danio_rerio
ENSECAG00000002620	-	95	97.500	ENSDNOG00000030926	-	100	97.500	Dasypus_novemcinctus
ENSECAG00000002620	-	95	97.500	ENSDORG00000011362	-	100	97.500	Dipodomys_ordii
ENSECAG00000002620	-	100	100.000	ENSEASG00005010399	-	100	100.000	Equus_asinus_asinus
ENSECAG00000002620	-	95	94.500	ENSEEUG00000008203	-	100	94.500	Erinaceus_europaeus
ENSECAG00000002620	-	98	78.155	ENSELUG00000003614	pabpc1a	60	78.155	Esox_lucius
ENSECAG00000002620	-	94	54.545	ENSELUG00000005389	-	82	54.545	Esox_lucius
ENSECAG00000002620	-	98	78.641	ENSELUG00000015062	-	60	78.641	Esox_lucius
ENSECAG00000002620	-	95	99.500	ENSFCAG00000039701	-	100	99.500	Felis_catus
ENSECAG00000002620	-	95	99.000	ENSFDAG00000005484	-	100	99.000	Fukomys_damarensis
ENSECAG00000002620	-	98	77.670	ENSFHEG00000008186	pabpc1b	59	77.670	Fundulus_heteroclitus
ENSECAG00000002620	-	98	78.641	ENSFHEG00000018979	pabpc1a	59	78.641	Fundulus_heteroclitus
ENSECAG00000002620	-	98	78.155	ENSGMOG00000002448	-	59	78.155	Gadus_morhua
ENSECAG00000002620	-	98	78.155	ENSGMOG00000013448	pabpc1a	58	78.155	Gadus_morhua
ENSECAG00000002620	-	98	78.155	ENSGAFG00000010193	pabpc1b	62	78.155	Gambusia_affinis
ENSECAG00000002620	-	98	78.641	ENSGAFG00000019750	pabpc1a	63	78.641	Gambusia_affinis
ENSECAG00000002620	-	98	78.641	ENSGACG00000003572	pabpc1a	59	78.641	Gasterosteus_aculeatus
ENSECAG00000002620	-	98	79.126	ENSGACG00000003771	pabpc1b	66	79.126	Gasterosteus_aculeatus
ENSECAG00000002620	-	95	99.000	ENSGGOG00000043933	-	100	99.000	Gorilla_gorilla
ENSECAG00000002620	-	95	99.000	ENSGGOG00000038606	-	100	99.000	Gorilla_gorilla
ENSECAG00000002620	-	98	76.699	ENSHBUG00000002075	pabpc1b	62	76.699	Haplochromis_burtoni
ENSECAG00000002620	-	98	78.641	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSECAG00000002620	-	95	97.000	ENSHGLG00000019668	-	100	97.000	Heterocephalus_glaber_female
ENSECAG00000002620	-	95	97.000	ENSHGLG00000019762	-	100	97.000	Heterocephalus_glaber_female
ENSECAG00000002620	-	95	97.000	ENSHGLG00100020854	-	100	97.000	Heterocephalus_glaber_male
ENSECAG00000002620	-	90	68.783	ENSHCOG00000003175	pabpc1b	69	67.347	Hippocampus_comes
ENSECAG00000002620	-	98	78.641	ENSHCOG00000013502	pabpc1a	59	78.641	Hippocampus_comes
ENSECAG00000002620	-	96	59.799	ENSIPUG00000021244	-	53	59.799	Ictalurus_punctatus
ENSECAG00000002620	-	98	78.155	ENSIPUG00000010791	-	63	78.155	Ictalurus_punctatus
ENSECAG00000002620	-	98	78.155	ENSIPUG00000008848	pabpc1a	61	78.155	Ictalurus_punctatus
ENSECAG00000002620	-	95	98.500	ENSSTOG00000026028	-	100	98.500	Ictidomys_tridecemlineatus
ENSECAG00000002620	-	95	98.500	ENSSTOG00000022096	-	100	98.500	Ictidomys_tridecemlineatus
ENSECAG00000002620	-	95	98.000	ENSJJAG00000007037	-	100	98.000	Jaculus_jaculus
ENSECAG00000002620	-	98	77.670	ENSKMAG00000008049	pabpc1b	64	77.670	Kryptolebias_marmoratus
ENSECAG00000002620	-	98	78.641	ENSKMAG00000000605	pabpc1a	59	78.641	Kryptolebias_marmoratus
ENSECAG00000002620	-	98	78.641	ENSLBEG00000026845	pabpc1b	59	78.641	Labrus_bergylta
ENSECAG00000002620	-	98	78.641	ENSLBEG00000024002	-	59	78.641	Labrus_bergylta
ENSECAG00000002620	-	95	96.985	ENSLAFG00000023096	-	99	96.985	Loxodonta_africana
ENSECAG00000002620	-	95	98.507	ENSMFAG00000028878	-	100	98.507	Macaca_fascicularis
ENSECAG00000002620	-	95	99.000	ENSMMUG00000039929	-	100	99.000	Macaca_mulatta
ENSECAG00000002620	-	95	99.000	ENSMMUG00000009740	-	100	99.000	Macaca_mulatta
ENSECAG00000002620	-	95	99.000	ENSMMUG00000037681	-	100	99.000	Macaca_mulatta
ENSECAG00000002620	-	95	99.000	ENSMNEG00000037732	-	100	99.000	Macaca_nemestrina
ENSECAG00000002620	-	95	99.000	ENSMLEG00000027495	-	100	99.000	Mandrillus_leucophaeus
ENSECAG00000002620	-	98	78.641	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSECAG00000002620	-	98	77.670	ENSMAMG00000014610	pabpc1b	61	77.670	Mastacembelus_armatus
ENSECAG00000002620	-	98	78.641	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSECAG00000002620	-	98	76.699	ENSMZEG00005026745	pabpc1b	59	76.699	Maylandia_zebra
ENSECAG00000002620	-	95	100.000	ENSMICG00000047642	-	100	100.000	Microcebus_murinus
ENSECAG00000002620	-	98	78.641	ENSMMOG00000018009	pabpc1b	63	78.641	Mola_mola
ENSECAG00000002620	-	98	78.641	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSECAG00000002620	-	96	66.169	ENSMODG00000015024	-	58	66.169	Monodelphis_domestica
ENSECAG00000002620	-	94	73.737	ENSMODG00000013156	-	58	73.737	Monodelphis_domestica
ENSECAG00000002620	-	98	78.641	ENSMALG00000013020	-	64	78.641	Monopterus_albus
ENSECAG00000002620	-	98	77.670	ENSMALG00000006066	pabpc1b	64	77.670	Monopterus_albus
ENSECAG00000002620	-	95	97.500	ENSNGAG00000012688	-	100	97.500	Nannospalax_galili
ENSECAG00000002620	-	98	78.641	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSECAG00000002620	-	98	76.699	ENSNBRG00000013737	pabpc1b	63	76.699	Neolamprologus_brichardi
ENSECAG00000002620	-	95	99.000	ENSNLEG00000018128	-	100	99.000	Nomascus_leucogenys
ENSECAG00000002620	-	95	96.500	ENSODEG00000018540	-	100	96.500	Octodon_degus
ENSECAG00000002620	-	98	76.699	ENSONIG00000002717	pabpc1b	59	76.699	Oreochromis_niloticus
ENSECAG00000002620	-	98	78.641	ENSONIG00000006871	-	59	78.641	Oreochromis_niloticus
ENSECAG00000002620	-	95	99.500	ENSOCUG00000002565	-	100	99.500	Oryctolagus_cuniculus
ENSECAG00000002620	-	98	78.641	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSECAG00000002620	-	95	76.500	ENSORLG00000003008	-	59	76.500	Oryzias_latipes
ENSECAG00000002620	-	98	75.728	ENSORLG00020022259	-	60	75.728	Oryzias_latipes_hni
ENSECAG00000002620	-	98	78.641	ENSORLG00020022398	pabpc1a	59	78.641	Oryzias_latipes_hni
ENSECAG00000002620	-	98	78.641	ENSORLG00015013633	pabpc1	59	78.641	Oryzias_latipes_hsok
ENSECAG00000002620	-	98	75.728	ENSORLG00015010932	-	60	75.728	Oryzias_latipes_hsok
ENSECAG00000002620	-	93	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSECAG00000002620	-	98	78.641	ENSOMEG00000020219	pabpc1a	59	78.641	Oryzias_melastigma
ENSECAG00000002620	-	95	100.000	ENSOGAG00000026047	-	100	100.000	Otolemur_garnettii
ENSECAG00000002620	-	95	100.000	ENSOGAG00000029513	-	100	100.000	Otolemur_garnettii
ENSECAG00000002620	-	95	99.000	ENSOARG00000005943	-	100	99.000	Ovis_aries
ENSECAG00000002620	-	95	99.000	ENSPPAG00000012920	-	100	99.000	Pan_paniscus
ENSECAG00000002620	-	95	99.500	ENSPPRG00000011809	-	100	99.500	Panthera_pardus
ENSECAG00000002620	-	95	99.500	ENSPPRG00000011804	-	100	99.500	Panthera_pardus
ENSECAG00000002620	-	95	99.000	ENSPTRG00000028252	-	100	99.000	Pan_troglodytes
ENSECAG00000002620	-	95	99.000	ENSPANG00000011549	-	100	99.000	Papio_anubis
ENSECAG00000002620	-	98	78.155	ENSPKIG00000005676	pabpc1b	59	78.155	Paramormyrops_kingsleyae
ENSECAG00000002620	-	98	77.670	ENSPMGG00000022487	pabpc1a	77	77.670	Periophthalmus_magnuspinnatus
ENSECAG00000002620	-	98	78.155	ENSPMGG00000023134	-	81	78.155	Periophthalmus_magnuspinnatus
ENSECAG00000002620	-	98	78.641	ENSPFOG00000010815	pabpc1a	58	78.641	Poecilia_formosa
ENSECAG00000002620	-	98	77.670	ENSPFOG00000005917	pabpc1b	59	77.670	Poecilia_formosa
ENSECAG00000002620	-	98	78.641	ENSPLAG00000004114	pabpc1a	59	78.641	Poecilia_latipinna
ENSECAG00000002620	-	98	78.155	ENSPLAG00000001388	pabpc1b	59	78.155	Poecilia_latipinna
ENSECAG00000002620	-	98	77.670	ENSPMEG00000014399	pabpc1b	62	74.757	Poecilia_mexicana
ENSECAG00000002620	-	98	78.641	ENSPMEG00000001334	pabpc1a	59	78.641	Poecilia_mexicana
ENSECAG00000002620	-	98	78.641	ENSPREG00000019595	pabpc1a	92	84.091	Poecilia_reticulata
ENSECAG00000002620	-	98	78.155	ENSPREG00000010911	pabpc1b	62	78.155	Poecilia_reticulata
ENSECAG00000002620	-	95	99.000	ENSPPYG00000020468	-	100	99.000	Pongo_abelii
ENSECAG00000002620	-	95	98.500	ENSPCAG00000005308	-	100	98.500	Procavia_capensis
ENSECAG00000002620	-	95	99.500	ENSPCOG00000026349	-	100	99.500	Propithecus_coquereli
ENSECAG00000002620	-	95	95.500	ENSPVAG00000016117	-	100	95.500	Pteropus_vampyrus
ENSECAG00000002620	-	98	76.699	ENSPNYG00000012578	pabpc1b	62	76.699	Pundamilia_nyererei
ENSECAG00000002620	-	98	78.641	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSECAG00000002620	-	95	79.500	ENSPNAG00000024626	pabpc1b	59	79.500	Pygocentrus_nattereri
ENSECAG00000002620	-	98	77.184	ENSPNAG00000028408	pabpc1a	66	77.184	Pygocentrus_nattereri
ENSECAG00000002620	-	95	78.392	ENSRBIG00000028738	-	69	78.392	Rhinopithecus_bieti
ENSECAG00000002620	-	95	99.000	ENSRBIG00000027173	-	100	99.000	Rhinopithecus_bieti
ENSECAG00000002620	-	95	99.000	ENSRROG00000017404	-	100	99.000	Rhinopithecus_roxellana
ENSECAG00000002620	-	96	68.159	ENSSHAG00000000511	-	60	68.159	Sarcophilus_harrisii
ENSECAG00000002620	-	98	78.641	ENSSFOG00015006662	pabpc1a	59	78.641	Scleropages_formosus
ENSECAG00000002620	-	83	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSECAG00000002620	-	98	78.641	ENSSFOG00015002752	-	59	78.641	Scleropages_formosus
ENSECAG00000002620	-	98	78.641	ENSSMAG00000010803	pabpc1a	60	78.641	Scophthalmus_maximus
ENSECAG00000002620	-	98	77.670	ENSSMAG00000006869	pabpc1b	59	77.670	Scophthalmus_maximus
ENSECAG00000002620	-	98	78.641	ENSSDUG00000006675	pabpc1a	59	78.641	Seriola_dumerili
ENSECAG00000002620	-	98	78.155	ENSSDUG00000011965	pabpc1b	60	78.155	Seriola_dumerili
ENSECAG00000002620	-	98	78.641	ENSSLDG00000011661	pabpc1a	59	78.641	Seriola_lalandi_dorsalis
ENSECAG00000002620	-	98	78.155	ENSSLDG00000014156	pabpc1b	60	78.155	Seriola_lalandi_dorsalis
ENSECAG00000002620	-	98	78.641	ENSSPAG00000014453	-	59	78.641	Stegastes_partitus
ENSECAG00000002620	-	98	78.155	ENSSPAG00000019265	pabpc1b	65	78.155	Stegastes_partitus
ENSECAG00000002620	-	95	99.500	ENSSSCG00000036336	-	100	99.500	Sus_scrofa
ENSECAG00000002620	-	95	99.500	ENSSSCG00000032167	-	100	99.500	Sus_scrofa
ENSECAG00000002620	-	98	78.641	ENSTRUG00000011577	-	59	78.641	Takifugu_rubripes
ENSECAG00000002620	-	98	78.155	ENSTRUG00000003767	-	61	78.155	Takifugu_rubripes
ENSECAG00000002620	-	98	74.528	ENSTNIG00000013307	pabpc1a	59	74.528	Tetraodon_nigroviridis
ENSECAG00000002620	-	98	78.641	ENSTNIG00000009153	pabpc1b	59	78.641	Tetraodon_nigroviridis
ENSECAG00000002620	-	95	99.500	ENSTTRG00000013181	-	100	99.500	Tursiops_truncatus
ENSECAG00000002620	-	95	99.500	ENSUAMG00000008089	-	100	99.500	Ursus_americanus
ENSECAG00000002620	-	95	99.500	ENSUMAG00000003364	-	100	99.500	Ursus_maritimus
ENSECAG00000002620	-	98	57.711	ENSUMAG00000023926	-	90	57.143	Ursus_maritimus
ENSECAG00000002620	-	98	99.024	ENSVVUG00000015892	-	99	99.024	Vulpes_vulpes
ENSECAG00000002620	-	98	78.641	ENSXCOG00000017066	pabpc1a	63	78.641	Xiphophorus_couchianus
ENSECAG00000002620	-	98	78.155	ENSXCOG00000019901	pabpc1b	62	78.155	Xiphophorus_couchianus
ENSECAG00000002620	-	98	78.155	ENSXMAG00000003753	pabpc1b	90	78.218	Xiphophorus_maculatus
ENSECAG00000002620	-	98	78.641	ENSXMAG00000002555	pabpc1a	62	78.641	Xiphophorus_maculatus