EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000002676 (Gene tree)
Gene ID: 100062897
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 38824 bases
Position: chr2:88667877-88706700
Accession: 23320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000004410	ResIII	PF04851.15	1.1e-10	1	1
ENSECAP00000004410	DEAD	PF00270.29	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000006248	-	3228	-	ENSECAP00000004410	1052 (aa)	XP_001502076	F7AE75

Gene Model

Click here to download ENSECAG00000002676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000002676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000002676	SMARCA5	54	42.435	ENSECAG00000008915	CHD1L	63	42.884
ENSECAG00000002676	SMARCA5	93	85.831	ENSECAG00000012106	SMARCA1	92	85.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000002676	SMARCA5	100	98.954	ENSG00000153147	SMARCA5	100	98.954	Homo_sapiens
ENSECAG00000002676	SMARCA5	100	99.335	ENSAMEG00000009585	SMARCA5	100	99.335	Ailuropoda_melanoleuca
ENSECAG00000002676	SMARCA5	91	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSECAG00000002676	SMARCA5	98	94.010	ENSACAG00000003038	SMARCA5	99	94.010	Anolis_carolinensis
ENSECAG00000002676	SMARCA5	100	98.859	ENSANAG00000019345	SMARCA5	100	98.859	Aotus_nancymaae
ENSECAG00000002676	SMARCA5	100	98.859	ENSBTAG00000003399	SMARCA5	100	98.859	Bos_taurus
ENSECAG00000002676	SMARCA5	100	99.049	ENSCJAG00000002735	SMARCA5	100	99.049	Callithrix_jacchus
ENSECAG00000002676	SMARCA5	100	99.240	ENSCAFG00000007525	SMARCA5	100	99.240	Canis_familiaris
ENSECAG00000002676	SMARCA5	98	99.225	ENSCAFG00020025641	SMARCA5	99	99.225	Canis_lupus_dingo
ENSECAG00000002676	SMARCA5	100	97.529	ENSCHIG00000016375	-	100	97.529	Capra_hircus
ENSECAG00000002676	SMARCA5	100	99.240	ENSCHIG00000013730	-	100	99.240	Capra_hircus
ENSECAG00000002676	SMARCA5	99	95.985	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSECAG00000002676	SMARCA5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSECAG00000002676	SMARCA5	100	98.099	ENSCPOG00000002259	SMARCA5	100	98.099	Cavia_porcellus
ENSECAG00000002676	SMARCA5	100	99.049	ENSCCAG00000027215	SMARCA5	100	99.049	Cebus_capucinus
ENSECAG00000002676	SMARCA5	100	99.049	ENSCATG00000044917	SMARCA5	100	99.049	Cercocebus_atys
ENSECAG00000002676	SMARCA5	99	95.402	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSECAG00000002676	SMARCA5	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSECAG00000002676	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSECAG00000002676	SMARCA5	95	98.295	ENSCPBG00000027535	SMARCA5	96	98.098	Chrysemys_picta_bellii
ENSECAG00000002676	SMARCA5	100	98.859	ENSCANG00000041629	SMARCA5	100	98.859	Colobus_angolensis_palliatus
ENSECAG00000002676	SMARCA5	99	98.194	ENSCGRG00001012719	Smarca5	99	98.194	Cricetulus_griseus_chok1gshd
ENSECAG00000002676	SMARCA5	95	99.398	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSECAG00000002676	SMARCA5	98	95.648	ENSDNOG00000009158	SMARCA5	97	96.075	Dasypus_novemcinctus
ENSECAG00000002676	SMARCA5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSECAG00000002676	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSECAG00000002676	SMARCA5	100	100.000	ENSEASG00005001866	SMARCA5	100	100.000	Equus_asinus_asinus
ENSECAG00000002676	SMARCA5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSECAG00000002676	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSECAG00000002676	SMARCA5	100	99.335	ENSFCAG00000004544	SMARCA5	100	99.335	Felis_catus
ENSECAG00000002676	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSECAG00000002676	SMARCA5	99	95.881	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSECAG00000002676	SMARCA5	97	86.739	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSECAG00000002676	SMARCA5	95	97.791	ENSGALG00000009913	SMARCA5	96	97.598	Gallus_gallus
ENSECAG00000002676	SMARCA5	93	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSECAG00000002676	SMARCA5	96	97.431	ENSGAGG00000019882	SMARCA5	96	98.198	Gopherus_agassizii
ENSECAG00000002676	SMARCA5	100	98.954	ENSGGOG00000012595	SMARCA5	100	98.954	Gorilla_gorilla
ENSECAG00000002676	SMARCA5	96	89.851	ENSHGLG00000000317	-	95	89.780	Heterocephalus_glaber_female
ENSECAG00000002676	SMARCA5	100	98.099	ENSHGLG00000000816	-	99	98.099	Heterocephalus_glaber_female
ENSECAG00000002676	SMARCA5	95	98.705	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSECAG00000002676	SMARCA5	100	98.955	ENSSTOG00000010683	SMARCA5	99	98.955	Ictidomys_tridecemlineatus
ENSECAG00000002676	SMARCA5	100	97.814	ENSJJAG00000014965	Smarca5	100	97.814	Jaculus_jaculus
ENSECAG00000002676	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSECAG00000002676	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSECAG00000002676	SMARCA5	100	99.144	ENSLAFG00000007795	SMARCA5	100	99.144	Loxodonta_africana
ENSECAG00000002676	SMARCA5	100	99.049	ENSMFAG00000043649	SMARCA5	100	99.049	Macaca_fascicularis
ENSECAG00000002676	SMARCA5	100	99.049	ENSMMUG00000000829	SMARCA5	100	99.049	Macaca_mulatta
ENSECAG00000002676	SMARCA5	100	99.049	ENSMNEG00000031916	SMARCA5	100	99.049	Macaca_nemestrina
ENSECAG00000002676	SMARCA5	100	99.049	ENSMLEG00000042393	SMARCA5	100	99.049	Mandrillus_leucophaeus
ENSECAG00000002676	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSECAG00000002676	SMARCA5	97	97.645	ENSMAUG00000015902	Smarca5	99	97.645	Mesocricetus_auratus
ENSECAG00000002676	SMARCA5	100	99.240	ENSMICG00000003971	SMARCA5	100	99.240	Microcebus_murinus
ENSECAG00000002676	SMARCA5	99	97.909	ENSMOCG00000016986	-	99	97.909	Microtus_ochrogaster
ENSECAG00000002676	SMARCA5	100	95.924	ENSMODG00000000391	SMARCA5	95	99.098	Monodelphis_domestica
ENSECAG00000002676	SMARCA5	100	98.194	ENSMUSG00000031715	Smarca5	100	98.194	Mus_musculus
ENSECAG00000002676	SMARCA5	100	98.384	MGP_PahariEiJ_G0022862	Smarca5	100	98.384	Mus_pahari
ENSECAG00000002676	SMARCA5	100	99.335	ENSMLUG00000000468	SMARCA5	100	99.335	Myotis_lucifugus
ENSECAG00000002676	SMARCA5	100	98.289	ENSNGAG00000000441	Smarca5	100	98.289	Nannospalax_galili
ENSECAG00000002676	SMARCA5	100	99.049	ENSNLEG00000005383	SMARCA5	100	99.049	Nomascus_leucogenys
ENSECAG00000002676	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSECAG00000002676	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSECAG00000002676	SMARCA5	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSECAG00000002676	SMARCA5	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSECAG00000002676	SMARCA5	100	99.240	ENSOGAG00000009702	SMARCA5	100	99.240	Otolemur_garnettii
ENSECAG00000002676	SMARCA5	99	98.953	ENSOARG00000010589	SMARCA5	99	98.953	Ovis_aries
ENSECAG00000002676	SMARCA5	100	98.764	ENSPPAG00000028523	SMARCA5	100	98.764	Pan_paniscus
ENSECAG00000002676	SMARCA5	97	93.848	ENSPPRG00000004925	SMARCA5	97	94.701	Panthera_pardus
ENSECAG00000002676	SMARCA5	96	99.604	ENSPTIG00000020959	SMARCA5	97	99.604	Panthera_tigris_altaica
ENSECAG00000002676	SMARCA5	100	98.859	ENSPTRG00000016472	SMARCA5	100	98.859	Pan_troglodytes
ENSECAG00000002676	SMARCA5	100	99.049	ENSPANG00000001175	SMARCA5	100	99.049	Papio_anubis
ENSECAG00000002676	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSECAG00000002676	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSECAG00000002676	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSECAG00000002676	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSECAG00000002676	SMARCA5	97	97.839	ENSPEMG00000008060	Smarca5	99	97.839	Peromyscus_maniculatus_bairdii
ENSECAG00000002676	SMARCA5	96	69.783	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSECAG00000002676	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSECAG00000002676	SMARCA5	100	95.837	ENSPCIG00000003926	SMARCA5	95	99.098	Phascolarctos_cinereus
ENSECAG00000002676	SMARCA5	100	99.144	ENSPPYG00000015091	SMARCA5	100	99.144	Pongo_abelii
ENSECAG00000002676	SMARCA5	86	90.541	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSECAG00000002676	SMARCA5	100	96.483	ENSPCOG00000026744	SMARCA5	100	96.483	Propithecus_coquereli
ENSECAG00000002676	SMARCA5	99	99.334	ENSPVAG00000006482	SMARCA5	100	99.334	Pteropus_vampyrus
ENSECAG00000002676	SMARCA5	97	88.137	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSECAG00000002676	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSECAG00000002676	SMARCA5	100	98.860	ENSRBIG00000044644	SMARCA5	100	98.860	Rhinopithecus_bieti
ENSECAG00000002676	SMARCA5	98	98.742	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSECAG00000002676	SMARCA5	100	98.954	ENSSBOG00000036257	SMARCA5	100	98.954	Saimiri_boliviensis_boliviensis
ENSECAG00000002676	SMARCA5	94	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSECAG00000002676	SMARCA5	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSECAG00000002676	SMARCA5	98	93.792	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSECAG00000002676	SMARCA5	100	98.859	ENSSSCG00000009047	SMARCA5	100	98.859	Sus_scrofa
ENSECAG00000002676	SMARCA5	96	96.421	ENSTGUG00000002408	SMARCA5	99	96.421	Taeniopygia_guttata
ENSECAG00000002676	SMARCA5	98	99.225	ENSUAMG00000023495	SMARCA5	99	99.225	Ursus_americanus
ENSECAG00000002676	SMARCA5	95	99.801	ENSUMAG00000015324	SMARCA5	97	99.801	Ursus_maritimus
ENSECAG00000002676	SMARCA5	100	98.954	ENSVPAG00000008982	SMARCA5	100	98.954	Vicugna_pacos
ENSECAG00000002676	SMARCA5	100	99.240	ENSVVUG00000017473	SMARCA5	100	99.240	Vulpes_vulpes
ENSECAG00000002676	SMARCA5	95	88.966	ENSXETG00000017566	smarca5	95	93.242	Xenopus_tropicalis