EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000003539 (Gene tree)
Gene ID: 100062330
Gene Symbol: GATB
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 76249 bases
Position: chr2:82023562-82099810
Accession: 18259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000040640	GatB_Yqey	PF02637.18	4.1e-44	1	1
ENSECAP00000030150	GatB_Yqey	PF02637.18	4.5e-44	1	1
ENSECAP00000003355	GatB_Yqey	PF02637.18	4.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000054587	-	2217	-	ENSECAP00000040640	505 (aa)	-	-
ENSECAT00000037481	-	2226	-	ENSECAP00000030150	508 (aa)	-	-
ENSECAT00000004823	-	2340	-	ENSECAP00000003355	546 (aa)	-	F6SQG2

Gene Model

Click here to download ENSECAG00000003539's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb00970	Aminoacyl-tRNA biosynthesis	KEGG
ecb01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000003539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000003539	GATB	99	86.691	ENSG00000059691	GATB	99	86.691	Homo_sapiens
ENSECAG00000003539	GATB	90	67.066	ENSAPOG00000022676	gatb	91	67.066	Acanthochromis_polyacanthus
ENSECAG00000003539	GATB	100	87.143	ENSAMEG00000018434	GATB	100	87.143	Ailuropoda_melanoleuca
ENSECAG00000003539	GATB	77	65.057	ENSACIG00000015827	gatb	99	65.057	Amphilophus_citrinellus
ENSECAG00000003539	GATB	88	67.677	ENSAOCG00000009635	gatb	95	67.677	Amphiprion_ocellaris
ENSECAG00000003539	GATB	88	64.777	ENSAPEG00000023666	gatb	93	64.777	Amphiprion_percula
ENSECAG00000003539	GATB	90	66.068	ENSATEG00000011821	gatb	98	63.676	Anabas_testudineus
ENSECAG00000003539	GATB	88	73.887	ENSAPLG00000003933	GATB	99	73.887	Anas_platyrhynchos
ENSECAG00000003539	GATB	99	68.582	ENSACAG00000002772	GATB	100	68.582	Anolis_carolinensis
ENSECAG00000003539	GATB	99	85.612	ENSANAG00000020953	GATB	99	85.612	Aotus_nancymaae
ENSECAG00000003539	GATB	79	65.625	ENSACLG00000026091	gatb	96	62.422	Astatotilapia_calliptera
ENSECAG00000003539	GATB	88	61.492	ENSAMXG00000021662	gatb	89	61.492	Astyanax_mexicanus
ENSECAG00000003539	GATB	100	84.560	ENSBTAG00000013914	GATB	100	84.560	Bos_taurus
ENSECAG00000003539	GATB	100	86.355	ENSCJAG00000002147	GATB	100	86.355	Callithrix_jacchus
ENSECAG00000003539	GATB	100	87.612	ENSCAFG00000008088	GATB	100	87.612	Canis_familiaris
ENSECAG00000003539	GATB	100	87.253	ENSCAFG00020026686	GATB	100	87.253	Canis_lupus_dingo
ENSECAG00000003539	GATB	100	85.278	ENSCHIG00000020111	GATB	100	85.278	Capra_hircus
ENSECAG00000003539	GATB	99	86.691	ENSTSYG00000009976	GATB	99	86.691	Carlito_syrichta
ENSECAG00000003539	GATB	99	75.391	ENSCAPG00000010977	GATB	99	75.391	Cavia_aperea
ENSECAG00000003539	GATB	99	80.470	ENSCPOG00000005023	GATB	99	80.470	Cavia_porcellus
ENSECAG00000003539	GATB	84	85.987	ENSCCAG00000021445	GATB	95	85.987	Cebus_capucinus
ENSECAG00000003539	GATB	100	85.099	ENSCATG00000034281	GATB	100	85.099	Cercocebus_atys
ENSECAG00000003539	GATB	99	83.183	ENSCLAG00000005772	GATB	99	83.404	Chinchilla_lanigera
ENSECAG00000003539	GATB	100	84.919	ENSCSAG00000003318	GATB	100	84.919	Chlorocebus_sabaeus
ENSECAG00000003539	GATB	100	83.842	ENSCHOG00000008476	GATB	100	83.842	Choloepus_hoffmanni
ENSECAG00000003539	GATB	99	70.179	ENSCPBG00000025824	GATB	99	70.179	Chrysemys_picta_bellii
ENSECAG00000003539	GATB	100	85.278	ENSCANG00000029227	GATB	100	85.278	Colobus_angolensis_palliatus
ENSECAG00000003539	GATB	99	81.835	ENSCGRG00001024051	GATB	99	82.766	Cricetulus_griseus_chok1gshd
ENSECAG00000003539	GATB	99	81.835	ENSCGRG00000012974	GATB	99	82.766	Cricetulus_griseus_crigri
ENSECAG00000003539	GATB	90	64.671	ENSCSEG00000004009	gatb	99	62.299	Cynoglossus_semilaevis
ENSECAG00000003539	GATB	88	66.869	ENSCVAG00000017180	gatb	98	66.869	Cyprinodon_variegatus
ENSECAG00000003539	GATB	88	65.859	ENSDARG00000037309	gatb	90	65.859	Danio_rerio
ENSECAG00000003539	GATB	99	84.767	ENSDNOG00000012683	GATB	100	84.767	Dasypus_novemcinctus
ENSECAG00000003539	GATB	99	84.116	ENSDORG00000010241	Gatb	99	84.116	Dipodomys_ordii
ENSECAG00000003539	GATB	88	45.030	FBgn0039153	GatB	95	44.219	Drosophila_melanogaster
ENSECAG00000003539	GATB	90	77.064	ENSETEG00000002356	GATB	88	77.064	Echinops_telfairi
ENSECAG00000003539	GATB	100	97.846	ENSEASG00005015868	GATB	100	97.846	Equus_asinus_asinus
ENSECAG00000003539	GATB	85	77.011	ENSEEUG00000002311	GATB	86	77.011	Erinaceus_europaeus
ENSECAG00000003539	GATB	94	62.476	ENSELUG00000013584	gatb	96	64.516	Esox_lucius
ENSECAG00000003539	GATB	100	87.074	ENSFCAG00000003207	GATB	100	87.074	Felis_catus
ENSECAG00000003539	GATB	80	71.141	ENSFALG00000002209	GATB	99	71.141	Ficedula_albicollis
ENSECAG00000003539	GATB	99	82.914	ENSFDAG00000006426	GATB	99	84.043	Fukomys_damarensis
ENSECAG00000003539	GATB	88	66.869	ENSFHEG00000008643	GATB	95	64.504	Fundulus_heteroclitus
ENSECAG00000003539	GATB	88	65.714	ENSGMOG00000001575	gatb	99	65.714	Gadus_morhua
ENSECAG00000003539	GATB	95	69.868	ENSGALG00000010097	GATB	97	69.868	Gallus_gallus
ENSECAG00000003539	GATB	88	66.263	ENSGAFG00000014422	gatb	91	65.731	Gambusia_affinis
ENSECAG00000003539	GATB	88	66.122	ENSGACG00000017143	gatb	99	66.122	Gasterosteus_aculeatus
ENSECAG00000003539	GATB	99	70.179	ENSGAGG00000007826	GATB	99	70.179	Gopherus_agassizii
ENSECAG00000003539	GATB	99	86.691	ENSGGOG00000011099	GATB	99	86.691	Gorilla_gorilla
ENSECAG00000003539	GATB	88	66.869	ENSHBUG00000009656	gatb	90	66.869	Haplochromis_burtoni
ENSECAG00000003539	GATB	99	82.459	ENSHGLG00000001316	GATB	100	83.051	Heterocephalus_glaber_female
ENSECAG00000003539	GATB	99	82.459	ENSHGLG00100004289	GATB	99	83.191	Heterocephalus_glaber_male
ENSECAG00000003539	GATB	87	66.053	ENSHCOG00000006270	gatb	89	66.053	Hippocampus_comes
ENSECAG00000003539	GATB	88	65.112	ENSIPUG00000013560	gatb	90	65.112	Ictalurus_punctatus
ENSECAG00000003539	GATB	99	83.423	ENSSTOG00000005689	GATB	99	83.423	Ictidomys_tridecemlineatus
ENSECAG00000003539	GATB	99	82.914	ENSJJAG00000016979	Gatb	99	84.043	Jaculus_jaculus
ENSECAG00000003539	GATB	90	67.265	ENSKMAG00000004727	gatb	91	67.265	Kryptolebias_marmoratus
ENSECAG00000003539	GATB	92	64.355	ENSLBEG00000019511	gatb	94	64.355	Labrus_bergylta
ENSECAG00000003539	GATB	88	65.385	ENSLACG00000004352	GATB	96	65.992	Latimeria_chalumnae
ENSECAG00000003539	GATB	88	60.081	ENSLOCG00000008564	gatb	89	60.081	Lepisosteus_oculatus
ENSECAG00000003539	GATB	100	85.458	ENSLAFG00000022607	GATB	100	85.458	Loxodonta_africana
ENSECAG00000003539	GATB	100	85.099	ENSMMUG00000011048	GATB	100	85.099	Macaca_mulatta
ENSECAG00000003539	GATB	100	84.919	ENSMNEG00000040147	GATB	100	84.919	Macaca_nemestrina
ENSECAG00000003539	GATB	100	84.740	ENSMLEG00000042135	GATB	100	84.740	Mandrillus_leucophaeus
ENSECAG00000003539	GATB	92	64.603	ENSMAMG00000013256	gatb	94	64.603	Mastacembelus_armatus
ENSECAG00000003539	GATB	90	66.534	ENSMZEG00005008495	gatb	92	66.534	Maylandia_zebra
ENSECAG00000003539	GATB	88	74.291	ENSMGAG00000004276	GATB	98	74.291	Meleagris_gallopavo
ENSECAG00000003539	GATB	99	82.194	ENSMAUG00000019099	Gatb	99	82.979	Mesocricetus_auratus
ENSECAG00000003539	GATB	99	86.331	ENSMICG00000004311	GATB	99	86.331	Microcebus_murinus
ENSECAG00000003539	GATB	99	82.554	ENSMOCG00000017566	Gatb	99	83.404	Microtus_ochrogaster
ENSECAG00000003539	GATB	88	60.573	ENSMMOG00000005376	gatb	86	60.573	Mola_mola
ENSECAG00000003539	GATB	99	75.856	ENSMODG00000001031	GATB	99	75.856	Monodelphis_domestica
ENSECAG00000003539	GATB	90	66.068	ENSMALG00000003418	gatb	91	67.666	Monopterus_albus
ENSECAG00000003539	GATB	99	82.554	MGP_CAROLIEiJ_G0025120	Gatb	99	83.227	Mus_caroli
ENSECAG00000003539	GATB	99	82.914	ENSMUSG00000028085	Gatb	99	84.043	Mus_musculus
ENSECAG00000003539	GATB	99	82.914	MGP_PahariEiJ_G0026563	Gatb	99	83.191	Mus_pahari
ENSECAG00000003539	GATB	99	82.734	MGP_SPRETEiJ_G0026062	Gatb	99	82.734	Mus_spretus
ENSECAG00000003539	GATB	99	87.590	ENSMPUG00000007394	GATB	99	87.590	Mustela_putorius_furo
ENSECAG00000003539	GATB	100	88.689	ENSMLUG00000008194	GATB	100	88.689	Myotis_lucifugus
ENSECAG00000003539	GATB	100	83.483	ENSNGAG00000002152	Gatb	100	83.483	Nannospalax_galili
ENSECAG00000003539	GATB	77	64.989	ENSNBRG00000005947	gatb	99	64.989	Neolamprologus_brichardi
ENSECAG00000003539	GATB	99	86.331	ENSNLEG00000005836	GATB	99	86.331	Nomascus_leucogenys
ENSECAG00000003539	GATB	88	78.340	ENSMEUG00000001479	GATB	99	78.340	Notamacropus_eugenii
ENSECAG00000003539	GATB	99	81.329	ENSOPRG00000011496	GATB	99	81.329	Ochotona_princeps
ENSECAG00000003539	GATB	99	81.736	ENSODEG00000005429	GATB	99	82.553	Octodon_degus
ENSECAG00000003539	GATB	90	66.335	ENSONIG00000010059	gatb	92	66.335	Oreochromis_niloticus
ENSECAG00000003539	GATB	78	76.782	ENSOANG00000005282	GATB	99	76.782	Ornithorhynchus_anatinus
ENSECAG00000003539	GATB	100	81.688	ENSOCUG00000016875	GATB	99	81.688	Oryctolagus_cuniculus
ENSECAG00000003539	GATB	88	64.300	ENSORLG00000007740	gatb	99	64.300	Oryzias_latipes
ENSECAG00000003539	GATB	89	65.600	ENSORLG00020016385	gatb	91	65.600	Oryzias_latipes_hni
ENSECAG00000003539	GATB	89	65.060	ENSOMEG00000003089	gatb	91	65.060	Oryzias_melastigma
ENSECAG00000003539	GATB	100	84.740	ENSOGAG00000014181	GATB	100	84.740	Otolemur_garnettii
ENSECAG00000003539	GATB	100	84.464	ENSOARG00000004355	GATB	100	84.464	Ovis_aries
ENSECAG00000003539	GATB	99	86.871	ENSPPAG00000041690	GATB	99	86.871	Pan_paniscus
ENSECAG00000003539	GATB	100	86.894	ENSPPRG00000004993	GATB	100	86.894	Panthera_pardus
ENSECAG00000003539	GATB	100	87.074	ENSPTIG00000021433	GATB	100	87.074	Panthera_tigris_altaica
ENSECAG00000003539	GATB	99	82.944	ENSPTRG00000016513	GATB	99	82.944	Pan_troglodytes
ENSECAG00000003539	GATB	100	84.690	ENSPANG00000024036	GATB	100	84.690	Papio_anubis
ENSECAG00000003539	GATB	93	64.107	ENSPKIG00000017076	gatb	96	65.789	Paramormyrops_kingsleyae
ENSECAG00000003539	GATB	97	69.691	ENSPSIG00000017832	GATB	100	69.691	Pelodiscus_sinensis
ENSECAG00000003539	GATB	88	60.352	ENSPMGG00000016497	gatb	88	60.352	Periophthalmus_magnuspinnatus
ENSECAG00000003539	GATB	99	82.914	ENSPEMG00000011096	Gatb	99	83.191	Peromyscus_maniculatus_bairdii
ENSECAG00000003539	GATB	99	75.495	ENSPCIG00000015213	GATB	99	75.495	Phascolarctos_cinereus
ENSECAG00000003539	GATB	88	66.667	ENSPFOG00000009933	gatb	91	66.667	Poecilia_formosa
ENSECAG00000003539	GATB	88	66.869	ENSPLAG00000015569	gatb	94	64.848	Poecilia_latipinna
ENSECAG00000003539	GATB	88	66.465	ENSPMEG00000006100	gatb	91	66.465	Poecilia_mexicana
ENSECAG00000003539	GATB	88	66.061	ENSPREG00000000128	gatb	94	63.581	Poecilia_reticulata
ENSECAG00000003539	GATB	99	86.871	ENSPPYG00000015121	GATB	99	86.871	Pongo_abelii
ENSECAG00000003539	GATB	99	66.367	ENSPCAG00000005950	GATB	99	66.367	Procavia_capensis
ENSECAG00000003539	GATB	97	86.876	ENSPCOG00000021777	GATB	99	86.200	Propithecus_coquereli
ENSECAG00000003539	GATB	100	88.330	ENSPVAG00000006891	GATB	99	88.330	Pteropus_vampyrus
ENSECAG00000003539	GATB	90	66.534	ENSPNYG00000013884	gatb	92	66.534	Pundamilia_nyererei
ENSECAG00000003539	GATB	98	60.766	ENSPNAG00000020150	gatb	97	60.766	Pygocentrus_nattereri
ENSECAG00000003539	GATB	99	82.194	ENSRNOG00000037655	Gatb	99	82.194	Rattus_norvegicus
ENSECAG00000003539	GATB	100	84.919	ENSRBIG00000006453	GATB	100	84.919	Rhinopithecus_bieti
ENSECAG00000003539	GATB	100	84.919	ENSRROG00000041575	GATB	100	84.919	Rhinopithecus_roxellana
ENSECAG00000003539	GATB	82	33.122	YBL080C	-	85	32.489	Saccharomyces_cerevisiae
ENSECAG00000003539	GATB	100	84.919	ENSSBOG00000022495	GATB	100	84.919	Saimiri_boliviensis_boliviensis
ENSECAG00000003539	GATB	99	74.054	ENSSHAG00000011763	GATB	99	74.054	Sarcophilus_harrisii
ENSECAG00000003539	GATB	90	67.197	ENSSFOG00015015565	gatb	91	67.197	Scleropages_formosus
ENSECAG00000003539	GATB	90	66.467	ENSSMAG00000003609	gatb	69	66.733	Scophthalmus_maximus
ENSECAG00000003539	GATB	94	64.436	ENSSDUG00000019847	gatb	94	64.436	Seriola_dumerili
ENSECAG00000003539	GATB	88	66.667	ENSSLDG00000010253	gatb	95	66.667	Seriola_lalandi_dorsalis
ENSECAG00000003539	GATB	75	74.419	ENSSARG00000003212	GATB	76	74.419	Sorex_araneus
ENSECAG00000003539	GATB	93	70.954	ENSSPUG00000014453	GATB	99	72.745	Sphenodon_punctatus
ENSECAG00000003539	GATB	88	68.081	ENSSPAG00000014465	gatb	98	68.081	Stegastes_partitus
ENSECAG00000003539	GATB	100	85.817	ENSSSCG00000009015	GATB	100	86.270	Sus_scrofa
ENSECAG00000003539	GATB	88	73.887	ENSTGUG00000004986	GATB	99	73.887	Taeniopygia_guttata
ENSECAG00000003539	GATB	88	60.956	ENSTRUG00000015238	gatb	91	60.956	Takifugu_rubripes
ENSECAG00000003539	GATB	73	62.530	ENSTNIG00000003378	gatb	100	62.530	Tetraodon_nigroviridis
ENSECAG00000003539	GATB	61	81.765	ENSTBEG00000009804	GATB	88	61.574	Tupaia_belangeri
ENSECAG00000003539	GATB	100	85.458	ENSTTRG00000010679	GATB	100	85.458	Tursiops_truncatus
ENSECAG00000003539	GATB	100	88.869	ENSUAMG00000021441	GATB	100	88.869	Ursus_americanus
ENSECAG00000003539	GATB	100	88.330	ENSUMAG00000016157	GATB	100	88.330	Ursus_maritimus
ENSECAG00000003539	GATB	80	77.679	ENSVPAG00000010844	GATB	80	77.679	Vicugna_pacos
ENSECAG00000003539	GATB	100	87.612	ENSVVUG00000025083	GATB	100	87.612	Vulpes_vulpes
ENSECAG00000003539	GATB	87	69.610	ENSXETG00000034167	GATB	98	69.574	Xenopus_tropicalis
ENSECAG00000003539	GATB	94	64.381	ENSXMAG00000008071	gatb	95	67.760	Xiphophorus_maculatus