EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000004701 (Gene tree)
Gene ID: 100062520
Gene Symbol: CSTF2T
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 1860 bases
Position: chr1:42647313-42649172
Accession: 16921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000003172	RRM_1	PF00076.22	6.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000004575	-	1860	-	ENSECAP00000003172	619 (aa)	XP_001917732	F6S3U2

Gene Model

Click here to download ENSECAG00000004701's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000004701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000004701	CSTF2T	99	69.984	ENSECAG00000009325	CSTF2	99	69.668

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000004701	CSTF2T	100	92.013	ENSG00000177613	CSTF2T	100	91.214	Homo_sapiens
ENSECAG00000004701	CSTF2T	100	93.429	ENSAMEG00000015766	CSTF2T	100	93.429	Ailuropoda_melanoleuca
ENSECAG00000004701	CSTF2T	52	83.384	ENSANAG00000027508	-	89	83.133	Aotus_nancymaae
ENSECAG00000004701	CSTF2T	100	88.598	ENSBTAG00000018406	CSTF2T	100	93.060	Bos_taurus
ENSECAG00000004701	CSTF2T	52	83.686	ENSCJAG00000011554	-	97	83.686	Callithrix_jacchus
ENSECAG00000004701	CSTF2T	52	78.287	ENSCJAG00000039083	-	93	78.287	Callithrix_jacchus
ENSECAG00000004701	CSTF2T	90	100.000	ENSCAFG00000015567	CSTF2T	98	94.089	Canis_familiaris
ENSECAG00000004701	CSTF2T	80	81.712	ENSCAFG00020026426	CSTF2T	100	81.089	Canis_lupus_dingo
ENSECAG00000004701	CSTF2T	100	92.026	ENSCHIG00000016590	CSTF2T	100	90.650	Capra_hircus
ENSECAG00000004701	CSTF2T	100	91.256	ENSTSYG00000007750	CSTF2T	100	90.461	Carlito_syrichta
ENSECAG00000004701	CSTF2T	100	85.957	ENSCPOG00000004195	CSTF2T	100	85.957	Cavia_porcellus
ENSECAG00000004701	CSTF2T	52	82.934	ENSCCAG00000020816	-	88	82.934	Cebus_capucinus
ENSECAG00000004701	CSTF2T	52	83.183	ENSCATG00000041868	-	95	82.583	Cercocebus_atys
ENSECAG00000004701	CSTF2T	100	88.752	ENSCLAG00000017916	CSTF2T	100	88.752	Chinchilla_lanigera
ENSECAG00000004701	CSTF2T	100	91.905	ENSCSAG00000018437	CSTF2T	100	91.429	Chlorocebus_sabaeus
ENSECAG00000004701	CSTF2T	69	98.450	ENSCHOG00000011888	-	68	98.450	Choloepus_hoffmanni
ENSECAG00000004701	CSTF2T	51	81.515	ENSCANG00000005843	-	92	81.515	Colobus_angolensis_palliatus
ENSECAG00000004701	CSTF2T	100	87.247	ENSCGRG00001003222	Cstf2t	100	86.137	Cricetulus_griseus_chok1gshd
ENSECAG00000004701	CSTF2T	100	87.988	ENSCGRG00000008682	Cstf2t	100	87.132	Cricetulus_griseus_crigri
ENSECAG00000004701	CSTF2T	100	92.742	ENSDNOG00000003283	CSTF2T	100	91.774	Dasypus_novemcinctus
ENSECAG00000004701	CSTF2T	80	91.485	ENSDORG00000011245	Cstf2t	100	89.921	Dipodomys_ordii
ENSECAG00000004701	CSTF2T	100	98.708	ENSEASG00005012929	CSTF2T	100	98.708	Equus_asinus_asinus
ENSECAG00000004701	CSTF2T	85	90.306	ENSELUG00000004079	-	97	56.607	Esox_lucius
ENSECAG00000004701	CSTF2T	100	94.222	ENSFCAG00000046300	CSTF2T	100	94.222	Felis_catus
ENSECAG00000004701	CSTF2T	100	83.721	ENSFDAG00000021170	CSTF2T	100	89.474	Fukomys_damarensis
ENSECAG00000004701	CSTF2T	100	90.735	ENSGGOG00000042388	-	100	89.617	Gorilla_gorilla
ENSECAG00000004701	CSTF2T	100	90.735	ENSGGOG00000036416	-	100	89.617	Gorilla_gorilla
ENSECAG00000004701	CSTF2T	80	87.716	ENSHGLG00000015478	CSTF2T	100	88.872	Heterocephalus_glaber_female
ENSECAG00000004701	CSTF2T	80	87.716	ENSHGLG00100000336	CSTF2T	100	89.198	Heterocephalus_glaber_male
ENSECAG00000004701	CSTF2T	100	88.854	ENSSTOG00000026303	CSTF2T	100	88.226	Ictidomys_tridecemlineatus
ENSECAG00000004701	CSTF2T	80	94.970	ENSLAFG00000002058	CSTF2T	100	86.430	Loxodonta_africana
ENSECAG00000004701	CSTF2T	51	82.822	ENSMFAG00000042009	-	97	82.209	Macaca_fascicularis
ENSECAG00000004701	CSTF2T	52	82.635	ENSMMUG00000042906	-	99	82.036	Macaca_mulatta
ENSECAG00000004701	CSTF2T	51	82.822	ENSMNEG00000031410	-	97	82.209	Macaca_nemestrina
ENSECAG00000004701	CSTF2T	100	87.755	ENSMAUG00000006359	Cstf2t	100	89.011	Mesocricetus_auratus
ENSECAG00000004701	CSTF2T	100	83.912	ENSMICG00000030551	-	100	89.976	Microcebus_murinus
ENSECAG00000004701	CSTF2T	100	89.474	ENSMICG00000000867	-	100	91.547	Microcebus_murinus
ENSECAG00000004701	CSTF2T	100	87.950	ENSMOCG00000020428	Cstf2t	100	87.950	Microtus_ochrogaster
ENSECAG00000004701	CSTF2T	79	78.776	ENSMALG00000008842	-	97	53.760	Monopterus_albus
ENSECAG00000004701	CSTF2T	100	84.144	MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.383	Mus_caroli
ENSECAG00000004701	CSTF2T	80	88.760	ENSMUSG00000053536	Cstf2t	100	88.924	Mus_musculus
ENSECAG00000004701	CSTF2T	80	88.337	MGP_PahariEiJ_G0014365	Cstf2t	100	88.272	Mus_pahari
ENSECAG00000004701	CSTF2T	100	84.399	MGP_SPRETEiJ_G0023790	Cstf2t	100	89.236	Mus_spretus
ENSECAG00000004701	CSTF2T	100	91.415	ENSMPUG00000020141	CSTF2T	100	90.779	Mustela_putorius_furo
ENSECAG00000004701	CSTF2T	100	91.366	ENSMLUG00000011187	-	100	90.738	Myotis_lucifugus
ENSECAG00000004701	CSTF2T	100	83.307	ENSMLUG00000027140	-	100	82.353	Myotis_lucifugus
ENSECAG00000004701	CSTF2T	100	87.755	ENSNGAG00000003304	Cstf2t	100	86.813	Nannospalax_galili
ENSECAG00000004701	CSTF2T	100	87.639	ENSNLEG00000012025	CSTF2T	100	86.846	Nomascus_leucogenys
ENSECAG00000004701	CSTF2T	100	81.202	ENSODEG00000012386	CSTF2T	100	81.202	Octodon_degus
ENSECAG00000004701	CSTF2T	81	91.182	ENSOCUG00000004647	-	100	81.422	Oryctolagus_cuniculus
ENSECAG00000004701	CSTF2T	100	91.787	ENSOGAG00000014565	CSTF2T	100	91.465	Otolemur_garnettii
ENSECAG00000004701	CSTF2T	100	92.429	ENSOARG00000013688	-	100	92.587	Ovis_aries
ENSECAG00000004701	CSTF2T	100	91.892	ENSOARG00000019124	-	100	93.280	Ovis_aries
ENSECAG00000004701	CSTF2T	51	82.012	ENSPPAG00000032242	-	96	81.707	Pan_paniscus
ENSECAG00000004701	CSTF2T	100	93.881	ENSPPRG00000018659	CSTF2T	100	94.042	Panthera_pardus
ENSECAG00000004701	CSTF2T	100	91.653	ENSPTIG00000021145	CSTF2T	100	91.493	Panthera_tigris_altaica
ENSECAG00000004701	CSTF2T	51	82.012	ENSPTRG00000043097	-	96	81.707	Pan_troglodytes
ENSECAG00000004701	CSTF2T	51	82.822	ENSPANG00000029734	-	97	82.209	Papio_anubis
ENSECAG00000004701	CSTF2T	98	52.598	ENSPFOG00000016756	CSTF2T	63	88.500	Poecilia_formosa
ENSECAG00000004701	CSTF2T	100	92.381	ENSPPYG00000002441	CSTF2T	100	92.381	Pongo_abelii
ENSECAG00000004701	CSTF2T	100	90.605	ENSPCAG00000000046	CSTF2T	100	91.242	Procavia_capensis
ENSECAG00000004701	CSTF2T	99	92.122	ENSPCOG00000010982	CSTF2T	99	92.444	Propithecus_coquereli
ENSECAG00000004701	CSTF2T	100	93.881	ENSPVAG00000006274	CSTF2T	100	92.432	Pteropus_vampyrus
ENSECAG00000004701	CSTF2T	100	89.342	ENSRNOG00000050289	Cstf2t	100	88.715	Rattus_norvegicus
ENSECAG00000004701	CSTF2T	100	91.374	ENSRBIG00000029324	CSTF2T	100	90.735	Rhinopithecus_bieti
ENSECAG00000004701	CSTF2T	100	91.534	ENSRROG00000042507	CSTF2T	100	90.895	Rhinopithecus_roxellana
ENSECAG00000004701	CSTF2T	100	91.200	ENSSBOG00000022638	CSTF2T	100	90.720	Saimiri_boliviensis_boliviensis
ENSECAG00000004701	CSTF2T	88	92.913	ENSSARG00000002013	-	87	91.700	Sorex_araneus
ENSECAG00000004701	CSTF2T	100	92.960	ENSSSCG00000010430	CSTF2T	100	93.120	Sus_scrofa
ENSECAG00000004701	CSTF2T	100	81.920	ENSTBEG00000014379	CSTF2T	100	80.960	Tupaia_belangeri
ENSECAG00000004701	CSTF2T	100	95.153	ENSTTRG00000003341	CSTF2T	100	95.153	Tursiops_truncatus
ENSECAG00000004701	CSTF2T	100	92.476	ENSUMAG00000011141	CSTF2T	100	93.103	Ursus_maritimus
ENSECAG00000004701	CSTF2T	66	96.020	ENSVVUG00000002575	CSTF2T	89	95.652	Vulpes_vulpes